Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 8.6e-196 686.8 345 100.0
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 9.8e-192 673.3 345 98.6
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 7.0e-190 667.2 345 97.4
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 1.7e-188 662.5 345 96.8
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 1.9e-187 659.1 374 91.2
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 5.2e-185 651.0 343 94.8
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 6.8e-185 650.6 343 94.8
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 3.4e-184 648.3 343 94.8
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 5.8e-184 647.5 339 95.6
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 5.8e-184 647.5 343 95.3
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 1.7e-183 646.0 343 95.0
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 2.0e-181 639.0 343 93.3
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 4.7e-178 627.9 343 92.7
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 3.2e-174 615.1 339 90.0
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 1.2e-173 613.2 340 90.0
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 3.5e-173 611.7 340 88.8
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 5.2e-169 597.8 345 86.1
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 4.4e-168 594.7 339 90.6
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 1.9e-166 589.3 343 85.7
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 2.1e-162 575.9 342 83.6
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 1.9e-134 483.0 331 72.5
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 2.3e-132 476.1 340 69.7
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 6.7e-132 474.6 344 69.5
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 8.7e-132 474.2 340 69.1
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 7.4e-131 471.1 339 68.7
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 9.6e-131 470.7 339 69.3
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 2.1e-130 469.5 343 69.1
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 3.7e-130 468.8 339 69.3
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 3.7e-130 468.8 336 69.0
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 4.1e-129 465.3 339 67.6
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 6.9e-129 464.5 344 67.4
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 9.0e-129 464.2 343 66.5
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 2.0e-128 463.0 336 68.2
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 3.4e-128 462.2 344 64.8
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 4.5e-128 461.8 321 71.7
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 4.5e-128 461.8 336 66.7
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 3.8e-127 458.8 340 66.5
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 5.0e-127 458.4 337 68.2
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 1.4e-126 456.8 330 69.4
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 1.4e-126 456.8 323 70.6
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 3.2e-126 455.7 344 67.2
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 1.6e-125 453.4 337 65.6
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 4.6e-125 451.8 345 65.5
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 6.1e-125 451.4 331 65.9
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 3.0e-124 449.1 339 67.0
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 3.0e-124 449.1 339 67.0
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 3.9e-124 448.7 340 65.0
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 1.4e-121 440.3 333 64.0
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 4.1e-121 438.7 341 63.9
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 1.2e-120 437.2 339 62.8
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 7.7e-120 434.5 338 64.5
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 1.7e-119 433.3 338 64.2
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 2.9e-119 432.6 339 61.9
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 3.8e-119 432.2 337 63.8
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.8e-119 432.2 339 61.9
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.8e-119 432.2 339 61.9
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 6.5e-119 431.4 339 61.7
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 8.5e-119 431.0 339 61.7
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 2.5e-118 429.5 331 65.0
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 1.6e-117 426.8 329 62.6
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 2.1e-117 426.4 330 62.4
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 4.6e-117 425.2 330 64.2
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 7.9e-117 424.5 342 62.3
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 3.9e-116 422.2 342 62.3
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 2.0e-115 419.9 342 61.7
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 1.8e-113 413.3 341 61.9
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 3.1e-113 412.5 334 61.1
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 4.1e-113 412.1 339 61.7
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 5.3e-113 411.8 336 62.5
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 9.1e-113 411.0 342 60.8
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 2.6e-112 409.5 342 60.2
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 3.4e-112 409.1 336 61.0
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 4.5e-112 408.7 339 61.9
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 5.9e-112 408.3 342 60.8
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 7.7e-112 407.9 322 63.7
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 1.0e-111 407.5 338 59.8
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 1.0e-111 407.5 339 63.1
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 2.2e-111 406.4 338 62.1
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 2.9e-111 406.0 322 64.0
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 2.9e-111 406.0 340 62.1
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 3.8e-111 405.6 347 60.2
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 3.8e-111 405.6 325 62.8
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 6.5e-111 404.8 326 62.6
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 6.5e-111 404.8 330 63.6
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 1.1e-110 404.1 324 62.0
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 1.2e-109 400.6 335 61.2
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 2.7e-109 399.4 340 60.9
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 1.0e-108 397.5 345 58.3
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 2.3e-108 396.4 337 61.1
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 2.0e-107 393.3 336 58.9
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 9.7e-107 391.0 321 61.1
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 3.7e-106 389.0 340 58.5
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 4.8e-106 388.7 337 57.9
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 4.8e-106 388.7 337 57.9
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 8.2e-106 387.9 346 58.7
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 1.4e-105 387.1 331 60.1
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 9.1e-105 384.4 341 58.1
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 1.2e-104 384.0 345 56.2
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 1.6e-104 383.6 335 58.8
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 7.7e-104 381.3 341 57.8
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 5.0e-103 378.6 326 57.7
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 2.5e-102 376.3 338 56.5
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 4.7e-101 372.1 337 55.5
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 9.1e-97 357.8 356 54.5
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 1.6e-96 357.1 268 64.9
BcaNung05072 Brassica carinata HOM05D004841 ORTHO05D005874 4.5e-96 355.5 184 95.7
BcaNung05071 Brassica carinata HOM05D004841 ORTHO05D005874 7.7e-96 354.8 184 95.7
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 1.7e-95 353.6 322 57.5
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 1.6e-93 347.1 330 55.2
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 4.0e-92 342.4 322 53.4
SHI02861 Sapria himalayana HOM05D004841 ORTHO05D005874 5.7e-91 338.6 287 60.3
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 1.1e-86 324.3 256 62.1
Zm00001eb328580 Zea mays HOM05D004841 ORTHO05D005874 7.3e-78 295.0 333 49.2
ATR0772G214 Amborella trichopoda HOM05D004841 ORTHO05D005874 8.0e-77 291.6 326 44.2
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 5.9e-72 275.4 347 42.4
Mapoly0001s0498 Marchantia polymorpha HOM05D004841 ORTHO05D005874 7.0e-65 251.9 336 41.7
C06p41890 Brassica napus HOM05D004841 ORTHO05D005874 4.0e-60 236.1 137 90.5
BolC6t39240H Brassica oleracea HOM05D004841 ORTHO05D005874 9.9e-59 231.5 122 96.7
CDE07G1158 Ceratophyllum demersum HOM05D004841 ORTHO05D005874 2.4e-57 226.9 233 51.5
Os12g0615900 Oryza sativa ssp. japonica HOM05D004841 ORTHO05D005874 2.7e-56 223.4 258 48.4
AUR62042056 Chenopodium quinoa HOM05D004841 ORTHO05D005874 3.0e-55 219.9 181 56.4
SMO358G0291 Selaginella moellendorffii HOM05D004841 ORTHO05D005874 2.8e-53 213.4 321 39.3
Cpa.g.sc17.34 Carica papaya HOM05D004841 ORTHO05D005874 3.6e-53 213.0 134 73.9
Sabra13G0018400 Salix brachista HOM05D004841 ORTHO05D004358 1.2e-51 208.0 149 70.5
unitig_749.g13802 Utricularia gibba HOM05D004841 ORTHO05D005874 2.1e-48 197.2 163 62.6
Cre03.g205800 Chlamydomonas reinhardtii HOM05D004841 ORTHO05D005874 2.8e-45 186.8 330 34.5
Oeu062572.1 Olea europaea HOM05D004841 ORTHO05D005874 1.3e-39 167.9 144 57.6
Cpa.g.c47956 Carica papaya HOM05D004841 ORTHO05D005874 5.6e-38 162.5 97 74.2
unitig_749.g13803 Utricularia gibba HOM05D004841 ORTHO05D005874 7.6e-35 152.1 120 55.8
Thhalv10019798m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 1.3e-34 151.4 144 61.1
Sabra13G0018300 Salix brachista HOM05D004841 ORTHO05D005874 4.9e-34 149.4 116 64.7
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 6.4e-34 149.1 150 52.0
Hma1.2p1_0594F.1_g185900 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 1.2e-32 144.8 98 67.3
Sabra13G0015400 Salix brachista HOM05D004841 ORTHO05D005874 2.7e-32 143.7 99 69.7
Sabra13G0014300 Salix brachista HOM05D004841 ORTHO05D005874 1.0e-31 141.7 99 68.7
Sabra13G0014700 Salix brachista HOM05D000070 ORTHO05D000047 1.0e-31 141.7 99 68.7
CBR_g4467 Chara braunii HOM05D004841 ORTHO05D005874 4.3e-30 136.3 298 30.2
MCO15G572 Micromonas commoda HOM05D004841 ORTHO05D005874 7.4e-30 135.6 343 26.5
Pp3c9_24890 Physcomitrium patens HOM05D004841 ORTHO05D005874 3.7e-29 133.3 186 39.8
ATR1098G095 Amborella trichopoda HOM05D004841 ORTHO05D005874 1.5e-27 127.9 165 40.0
Pp3c15_25070 Physcomitrium patens HOM05D004841 ORTHO05D005874 7.6e-27 125.6 171 41.5
Sabra13G0015100 Salix brachista HOM05D004841 ORTHO05D005874 6.4e-26 122.5 85 68.2
Sabra13G0019300 Salix brachista HOM05D004841 ORTHO05D005874 6.4e-26 122.5 85 68.2
AagrBONN_evm.TU.Sc2ySwM_117.2336 Anthoceros agrestis HOM05D004841 ORTHO05D005874 1.3e-23 114.8 174 41.4
Oeu030952.1 Olea europaea HOM05D004841 ORTHO05D005874 1.5e-22 111.3 213 37.6
VMungo0251G1518 Vigna mungo HOM05D005230 ORTHO05D051605 7.4e-22 109.0 141 47.5
VMungo0720G0475 Vigna mungo HOM05D005230 ORTHO05D051605 5.3e-20 102.8 136 50.0
VMungo0331G1481 Vigna mungo HOM05D004841 ORTHO05D005874 1.7e-18 97.8 110 45.5
BcaC03g14843 Brassica carinata HOM05D004841 ORTHO05D005874 7.9e-16 89.0 48 87.5
BcaC08g46242 Brassica carinata HOM05D004841 ORTHO05D005874 1.1e-14 85.1 137 43.8
VMungo1382G0002 Vigna mungo HOM05D004841 ORTHO05D005874 7.4e-14 82.4 99 48.5
C04p54390 Brassica napus HOM05D004841 ORTHO05D005874 1.4e-12 78.2 56 75.0
Oeu030951.1 Olea europaea HOM05D004841 ORTHO05D005874 5.9e-11 72.8 128 41.4
Sabra13G0018600 Salix brachista HOM05D004841 ORTHO05D005874 7.6e-11 72.4 44 77.3
Actinidia16778 Actinidia chinensis HOM05D004841 ORTHO05D005874 1.0e-07 62.0 46 60.9
VMungo0712G0001 Vigna mungo HOM05D004841 ORTHO05D005874 8.8e-07 58.9 119 41.2
Mapoly0113s0048 Marchantia polymorpha HOM05D007125 ORTHO05D008766 5.7e-06 56.2 138 35.5


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