Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p38310 Brassica napus HOM05D003769 ORTHO05D004521 6.5e-154 547.4 275 100.0
A01p29770 Brassica napus HOM05D003769 ORTHO05D004521 2.3e-79 299.7 272 63.6
A04p16410 Brassica napus HOM05D003769 ORTHO05D004521 2.3e-79 299.7 272 63.6
A03p53530 Brassica napus HOM05D003769 ORTHO05D004521 2.8e-64 249.6 242 59.5
BraA03t14419Z Brassica rapa HOM05D003769 ORTHO05D004521 1.7e-58 230.3 272 52.6
BraA01t03104Z Brassica rapa HOM05D003769 ORTHO05D004521 5.3e-55 218.8 272 51.8
C01p22700 Brassica napus HOM05D003769 ORTHO05D032036 1.5e-46 190.7 305 43.9
BcaC08g43116 Brassica carinata HOM05D003769 ORTHO05D004521 2.4e-39 166.8 107 77.6
C06p03880 Brassica napus HOM05D003769 ORTHO05D004521 2.4e-39 166.8 107 77.6
BolC6t35520H Brassica oleracea HOM05D003769 ORTHO05D004521 2.4e-39 166.8 107 77.6
BcaC08g46036 Brassica carinata HOM05D003769 ORTHO05D032036 6.9e-39 165.2 180 57.2
A06p03980 Brassica napus HOM05D003769 ORTHO05D004521 6.9e-39 165.2 107 76.6
BraA06t23606Z Brassica rapa HOM05D003769 ORTHO05D004521 6.9e-39 165.2 107 76.6
BcaB04g17498 Brassica carinata HOM05D003769 ORTHO05D004521 5.9e-38 162.2 107 73.8
Thhalv10011186m.g Eutrema salsugineum HOM05D003769 ORTHO05D004521 2.2e-37 160.2 107 72.9
CARHR039080 Cardamine hirsuta HOM05D003769 ORTHO05D004521 5.0e-37 159.1 107 72.9
Sp1g35950 Schrenkiella parvula HOM05D003769 ORTHO05D004521 6.5e-37 158.7 107 73.8
Carub.0001s3822 Capsella rubella HOM05D003769 ORTHO05D004521 2.5e-36 156.8 107 71.0
AT1G49040 Arabidopsis thaliana HOM05D003769 ORTHO05D004521 3.2e-36 156.4 107 71.0
AL1G55920 Arabidopsis lyrata HOM05D003769 ORTHO05D004521 9.3e-36 154.8 106 70.8
Aa31LG10G4900 Aethionema arabicum HOM05D003769 ORTHO05D004521 1.1e-33 147.9 107 67.3
THA.LOC104820400 Tarenaya hassleriana HOM05D003769 ORTHO05D004521 8.5e-29 131.7 107 59.8
ClCG04G011210 Citrullus lanatus HOM05D003769 ORTHO05D004521 1.4e-28 131.0 107 58.9
CAN.G438.128 Capsicum annuum HOM05D003769 ORTHO05D004521 3.2e-28 129.8 112 58.0
Nitab4.5_0001599g0030 Nicotiana tabacum HOM05D003769 ORTHO05D004521 3.2e-28 129.8 112 58.0
Peaxi162Scf00015g00841 Petunia axillaris HOM05D003769 ORTHO05D004521 3.2e-28 129.8 115 57.4
Nitab4.5_0004412g0040 Nicotiana tabacum HOM05D003769 ORTHO05D004521 9.4e-28 128.3 112 57.1
Solyc03g119650.3 Solanum lycopersicum HOM05D003769 ORTHO05D004521 2.7e-27 126.7 112 57.1
Sopen03g038480 Solanum pennellii HOM05D003769 ORTHO05D004521 2.7e-27 126.7 112 57.1
Cc04_g07270 Coffea canephora HOM05D003769 ORTHO05D004521 7.9e-27 125.2 107 56.1
Sed0003499 Sechium edule HOM05D003769 ORTHO05D004521 1.8e-26 124.0 107 57.0
SGA_v2.0_scaffold612G53192 Striga asiatica HOM05D003769 ORTHO05D004521 2.3e-26 123.6 107 55.1
MELO3C002081.2 Cucumis melo HOM05D003769 ORTHO05D004521 3.0e-26 123.2 107 57.0
CsaV3_1G006540 Cucumis sativus L. HOM05D003769 ORTHO05D004521 3.0e-26 123.2 107 57.0
Migut.D01465 Erythranthe guttata HOM05D003769 ORTHO05D004521 3.0e-26 123.2 107 55.1
Cpa.g.sc13.14 Carica papaya HOM05D003769 ORTHO05D004521 8.8e-26 121.7 107 53.3
arahy.Tifrunner.gnm1.ann1.9P0TZR Arachis hypogaea HOM05D003769 ORTHO05D004521 1.1e-25 121.3 107 54.2
arahy.Tifrunner.gnm1.ann1.A9KR6W Arachis hypogaea HOM05D003769 ORTHO05D004521 1.1e-25 121.3 107 54.2
DCAR_027817 Daucus carota HOM05D003769 ORTHO05D004521 1.1e-25 121.3 107 54.2
CiPaw.15G128600 Carya illinoinensis HOM05D003769 ORTHO05D004521 1.5e-25 120.9 107 54.2
Ca_25453_v3 Cicer arietinum L. HOM05D003769 ORTHO05D004521 1.5e-25 120.9 107 54.2
HanXRQChr17g0558431 Helianthus annuus HOM05D003769 ORTHO05D004521 1.5e-25 120.9 106 51.9
Phvul.002G315300 Phaseolus vulgaris HOM05D003769 ORTHO05D004521 1.5e-25 120.9 110 53.6
PGR083G2820 Punica granatum HOM05D003769 ORTHO05D004521 1.5e-25 120.9 107 55.1
VMungo0251G1242 Vigna mungo HOM05D003769 ORTHO05D004521 1.5e-25 120.9 110 53.6
Nn4g23791 Nelumbo nucifera HOM05D003769 ORTHO05D004521 2.0e-25 120.6 110 54.5
ECA233G5984 Erigeron canadensis HOM05D003769 ORTHO05D004521 2.5e-25 120.2 107 51.4
Medtr8g104010 Medicago truncatula HOM05D003769 ORTHO05D004521 2.5e-25 120.2 110 54.5
Lj4g0007480 Lotus japonicus HOM05D003769 ORTHO05D004521 3.3e-25 119.8 107 53.3
Gohir.D09G173300 Gossypium hirsutum HOM05D003769 ORTHO05D004521 4.3e-25 119.4 110 52.7
TPR.G32677 Trifolium pratense HOM05D003769 ORTHO05D004521 4.3e-25 119.4 107 54.2
Rhsim08G0135600 Rhododendron simsii HOM05D003769 ORTHO05D004521 5.7e-25 119.0 107 53.3
Gohir.A09G177800 Gossypium hirsutum HOM05D003769 ORTHO05D004521 7.4e-25 118.6 107 52.3
Gorai.006G195200 Gossypium raimondii HOM05D003769 ORTHO05D004521 7.4e-25 118.6 107 52.3
Thecc.03G031600 Theobroma cacao HOM05D003769 ORTHO05D004521 7.4e-25 118.6 107 55.1
CSS0000649 Camellia sinensis var. sinensis HOM05D003769 ORTHO05D004521 9.7e-25 118.2 107 52.3
Glyma.08G040500 Glycine max HOM05D003769 ORTHO05D004521 9.7e-25 118.2 110 51.8
TAR629G2778 Trochodendron aralioides HOM05D003769 ORTHO05D004521 1.3e-24 117.9 107 53.3
PSO017G1990 Papaver somniferum HOM05D003769 ORTHO05D004521 1.7e-24 117.5 110 51.8
PSO478G4026 Papaver somniferum HOM05D003769 ORTHO05D004521 1.7e-24 117.5 110 51.8
MSTRG.9273 Avicennia marina HOM05D003769 ORTHO05D004521 2.8e-24 116.7 121 48.8
GSVIVG01008260001 Vitis vinifera HOM05D003769 ORTHO05D004521 2.8e-24 116.7 106 53.8
CDE01G0336 Ceratophyllum demersum HOM05D003769 ORTHO05D004521 3.7e-24 116.3 107 51.4
TWI81G0419 Tripterygium wilfordii HOM05D003769 ORTHO05D004521 3.7e-24 116.3 107 54.2
Lsat_1_v5_gn_8_146581 Lactuca sativa HOM05D003769 ORTHO05D004521 4.8e-24 115.9 107 51.4
Zm00001eb160220 Zea mays HOM05D003769 ORTHO05D004521 4.8e-24 115.9 107 51.4
Ah.02g115340 Amaranthus hybridus HOM05D003769 ORTHO05D004521 6.3e-24 115.5 107 54.2
Lalb_Chr05g0222571 Lupinus albus HOM05D003769 ORTHO05D004521 8.2e-24 115.2 107 51.4
Manes.01G013600 Manihot esculenta HOM05D003769 ORTHO05D004521 8.2e-24 115.2 107 52.3
Psat7g012720 Pisum sativum HOM05D003769 ORTHO05D004521 8.2e-24 115.2 107 52.3
Sc10g0009500 Simmondsia chinensis HOM05D003769 ORTHO05D004521 8.2e-24 115.2 107 53.3
Duzib084G0296 Durio zibethinus HOM05D003769 ORTHO05D004521 1.1e-23 114.8 107 51.4
Os01g0575500 Oryza sativa ssp. japonica HOM05D003769 ORTHO05D004521 1.1e-23 114.8 107 51.4
Duzib068G0584 Durio zibethinus HOM05D003769 ORTHO05D004521 1.4e-23 114.4 110 50.9
Eucgr.B00711 Eucalyptus grandis HOM05D003769 ORTHO05D004521 1.8e-23 114.0 110 50.9
ATR0322G035 Amborella trichopoda HOM05D003769 ORTHO05D004521 3.1e-23 113.2 107 52.3
CiPaw.16G085300 Carya illinoinensis HOM05D003769 ORTHO05D004521 3.1e-23 113.2 110 50.0
Actinidia31020 Actinidia chinensis HOM05D003769 ORTHO05D004521 4.1e-23 112.8 107 51.4
EL10Ac5g11428 Beta vulgaris HOM05D003769 ORTHO05D004521 4.1e-23 112.8 107 50.5
RcHm_v2.0_Chr7g0185021 Rosa chinensis HOM05D003769 ORTHO05D004521 4.1e-23 112.8 107 52.3
Ciclev10018557m.g Citrus clementina HOM05D003769 ORTHO05D004521 5.3e-23 112.5 110 50.0
Cfa019795 Carpinus fangiana HOM05D003769 ORTHO05D004521 6.9e-23 112.1 107 50.5
Oeu011132.2 Olea europaea HOM05D003769 ORTHO05D004521 6.9e-23 112.1 98 56.1
AUR62029853 Chenopodium quinoa HOM05D003769 ORTHO05D004521 9.1e-23 111.7 118 48.3
SEGI_15664 Sequoiadendron giganteum HOM05D003769 ORTHO05D004521 9.1e-23 111.7 109 49.5
Dinv07347 Davidia involucrata HOM05D003769 ORTHO05D004521 1.2e-22 111.3 107 51.4
Dinv40419 Davidia involucrata HOM05D003769 ORTHO05D004521 1.2e-22 111.3 107 50.5
Potri.015G049500 Populus trichocarpa HOM05D003769 ORTHO05D004521 1.2e-22 111.3 107 49.5
Prupe.5G219600 Prunus persica HOM05D003769 ORTHO05D004521 1.2e-22 111.3 107 51.4
Hund10227 Selenicereus undatus HOM05D003769 ORTHO05D000105 1.2e-22 111.3 107 52.3
FvH4_5g12450 Fragaria vesca HOM05D003769 ORTHO05D004521 1.5e-22 110.9 107 50.5
MD14G1224200 Malus domestica HOM05D003769 ORTHO05D004521 1.5e-22 110.9 107 51.4
FAN04G2437 Fragaria x ananassa HOM05D003769 ORTHO05D004521 2.0e-22 110.5 107 50.5
FAN08G0427 Fragaria x ananassa HOM05D003769 ORTHO05D004521 2.0e-22 110.5 107 50.5
FAN18G2555 Fragaria x ananassa HOM05D003769 ORTHO05D004521 2.0e-22 110.5 107 50.5
Hma1.2p1_1001F.1_g246600 Hydrangea macrophylla HOM05D003769 ORTHO05D004521 2.0e-22 110.5 107 50.5
Aqoxy3G00338 Aquilegia oxysepala HOM05D003769 ORTHO05D004521 2.6e-22 110.2 107 49.5
CANSAT80G0780 Cannabis sativa HOM05D003769 ORTHO05D004521 2.6e-22 110.2 107 50.5
Ah.11g044930 Amaranthus hybridus HOM05D003769 ORTHO05D004521 3.4e-22 109.8 107 49.5
FAN18G2189 Fragaria x ananassa HOM05D003769 ORTHO05D004521 3.4e-22 109.8 107 49.5
QL10p023978 Quercus lobata HOM05D003769 ORTHO05D004521 3.4e-22 109.8 106 50.9
Atru.chr9.806 Acer truncatum HOM05D003769 ORTHO05D004521 4.5e-22 109.4 110 48.2
Potri.012G060800 Populus trichocarpa HOM05D003769 ORTHO05D004521 4.5e-22 109.4 107 48.6
SMO228G0026 Selaginella moellendorffii HOM05D003769 ORTHO05D004521 4.5e-22 109.4 113 46.9
AUR62025881 Chenopodium quinoa HOM05D003769 ORTHO05D004521 1.3e-21 107.8 107 49.5
unitig_8.g3058 Utricularia gibba HOM05D003769 ORTHO05D004521 1.7e-21 107.5 107 47.7
MBI04_g31736_MAGBIO Magnolia biondii HOM05D003769 ORTHO05D004521 2.2e-21 107.1 107 50.5
SalBow1G2916 Salvia bowleyana HOM05D003769 ORTHO05D004521 2.2e-21 107.1 98 53.1
HPP92_022912 Vanilla planifolia HOM05D003769 ORTHO05D004521 2.9e-21 106.7 107 47.7
AUR62025889 Chenopodium quinoa HOM05D003769 ORTHO05D004521 5.0e-21 105.9 107 48.6
Mapoly0058s0028 Marchantia polymorpha HOM05D003769 ORTHO05D004521 8.5e-21 105.1 107 46.7
Aa31LG5G11570 Aethionema arabicum HOM05D003769 ORTHO05D004521 1.9e-20 104.0 91 57.1
MBI04_g48188_MAGBIO Magnolia biondii HOM05D003769 ORTHO05D004521 3.2e-20 103.2 72 59.7
Lj5C147T4 Lonicera japonica HOM05D003769 ORTHO05D004521 7.2e-20 102.1 121 43.0
Haze_18653 Corylus avellana HOM05D003769 ORTHO05D004521 9.4e-20 101.7 137 39.4
AUR62029854 Chenopodium quinoa HOM05D003769 ORTHO05D004521 1.4e-18 97.8 101 47.5
Pp3c26_9700 Physcomitrium patens HOM05D003769 ORTHO05D004521 3.0e-18 96.7 113 45.1
EL10Ac5g11429 Beta vulgaris HOM05D003769 ORTHO05D004521 3.3e-17 93.2 107 44.9
AagrBONN_evm.TU.Sc2ySwM_368.2777 Anthoceros agrestis HOM05D003769 ORTHO05D004521 7.0e-15 85.5 106 40.6
BolC7t43935H Brassica oleracea HOM05D003769 ORTHO05D004521 1.2e-14 84.7 44 86.4
BolC6t38930H Brassica oleracea HOM05D003769 ORTHO05D032036 8.5e-13 78.6 70 64.3
CBR_g48868 Chara braunii HOM05D007859 ORTHO05D009320 1.1e-12 78.2 71 47.9
FvH4_5g12360 Fragaria vesca HOM05D003769 ORTHO05D004521 3.5e-06 56.6 72 38.9
BolC8t48710H Brassica oleracea HOM05D000305 ORTHO05D000065 7.7e-06 55.5 36 75.0


User provided reference genes

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