Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p35200 Brassica napus HOM05D000361 ORTHO05D101084 5.3e-14 79.7 38 100.0
BcaC03g16842 Brassica carinata HOM05D000361 ORTHO05D007313 6.5e-12 72.8 35 97.1
BcaC06g31485 Brassica carinata HOM05D000361 ORTHO05D007313 6.5e-12 72.8 35 97.1
A02p29810 Brassica napus HOM05D000361 ORTHO05D007313 6.5e-12 72.8 35 97.1
A06p46030 Brassica napus HOM05D000361 ORTHO05D007313 6.5e-12 72.8 35 97.1
C02p47220 Brassica napus HOM05D000361 ORTHO05D007313 6.5e-12 72.8 35 97.1
C07p29500 Brassica napus HOM05D000361 ORTHO05D007313 6.5e-12 72.8 35 97.1
BolC2t10766H Brassica oleracea HOM05D000361 ORTHO05D007313 6.5e-12 72.8 35 97.1
BolC7t43499H Brassica oleracea HOM05D000361 ORTHO05D007313 6.5e-12 72.8 35 97.1
BraA02t08002Z Brassica rapa HOM05D000361 ORTHO05D007313 6.5e-12 72.8 35 97.1
BraA06t27467Z Brassica rapa HOM05D000361 ORTHO05D007313 6.5e-12 72.8 35 97.1
Aa31LG9G6610 Aethionema arabicum HOM05D000361 ORTHO05D007313 1.4e-11 71.6 35 94.3
Sp2g11130 Schrenkiella parvula HOM05D000361 ORTHO05D007313 1.4e-11 71.6 35 94.3
Thhalv10000786m.g Eutrema salsugineum HOM05D000361 ORTHO05D007313 2.7e-10 67.4 35 88.6
AL8G12180 Arabidopsis lyrata HOM05D000361 ORTHO05D007313 7.4e-08 59.3 34 85.3
AT5G46280 Arabidopsis thaliana HOM05D000361 ORTHO05D007313 7.4e-08 59.3 34 85.3
Lalb_Chr07g0188661 Lupinus albus HOM05D000361 ORTHO05D007313 1.3e-07 58.5 36 80.6
CARHR175520 Cardamine hirsuta HOM05D000361 ORTHO05D007313 1.6e-07 58.2 35 74.3
Atru.chr10.1316 Acer truncatum HOM05D000361 ORTHO05D007313 4.8e-07 56.6 35 80.0
FvH4_3g05860 Fragaria vesca HOM05D000361 ORTHO05D007313 4.8e-07 56.6 35 80.0
FAN11G2321 Fragaria x ananassa HOM05D000736 ORTHO05D007313 4.8e-07 56.6 35 80.0
FAN16G3703 Fragaria x ananassa HOM05D000361 ORTHO05D007313 4.8e-07 56.6 35 80.0
FAN21G3930 Fragaria x ananassa HOM05D000361 ORTHO05D007313 4.8e-07 56.6 35 80.0
FAN25G1702 Fragaria x ananassa HOM05D000361 ORTHO05D007313 4.8e-07 56.6 35 80.0
RcHm_v2.0_Chr5g0013661 Rosa chinensis HOM05D000361 ORTHO05D007313 4.8e-07 56.6 35 80.0
THA.LOC104806124 Tarenaya hassleriana HOM05D000361 ORTHO05D007313 8.2e-07 55.8 35 77.1
arahy.Tifrunner.gnm1.ann1.7J68PP Arachis hypogaea HOM05D000361 ORTHO05D007313 1.1e-06 55.5 35 77.1
arahy.Tifrunner.gnm1.ann1.I8W9P3 Arachis hypogaea HOM05D000361 ORTHO05D007313 1.1e-06 55.5 35 77.1
ClCG01G024510 Citrullus lanatus HOM05D000361 ORTHO05D007313 1.1e-06 55.5 35 77.1
Haze_05571 Corylus avellana HOM05D000361 ORTHO05D007313 1.1e-06 55.5 35 77.1
Phvul.002G194200 Phaseolus vulgaris HOM05D000361 ORTHO05D007313 1.1e-06 55.5 35 77.1
Prupe.4G078300 Prunus persica HOM05D000361 ORTHO05D007313 1.1e-06 55.5 35 77.1
Sed0015619 Sechium edule HOM05D000361 ORTHO05D007313 1.1e-06 55.5 35 77.1
VMungo1309G0878 Vigna mungo HOM05D000361 ORTHO05D007313 1.1e-06 55.5 35 77.1
GSVIVG01021426001 Vitis vinifera HOM05D000361 ORTHO05D007313 1.1e-06 55.5 35 77.1
QL05p058975 Quercus lobata HOM05D000361 ORTHO05D007313 1.4e-06 55.1 35 77.1
TAR626G0055 Trochodendron aralioides HOM05D000361 ORTHO05D007313 1.4e-06 55.1 35 77.1
CANSAT35G0708 Cannabis sativa HOM05D000361 ORTHO05D007313 1.8e-06 54.7 35 77.1
Ca_18269_v3 Cicer arietinum L. HOM05D000361 ORTHO05D007313 1.8e-06 54.7 35 77.1
MELO3C007144.2 Cucumis melo HOM05D000361 ORTHO05D007313 1.8e-06 54.7 35 77.1
DCAR_027944 Daucus carota HOM05D000361 ORTHO05D007313 1.8e-06 54.7 35 77.1
MBI10_g21116_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D007313 1.8e-06 54.7 35 77.1
Medtr4g096700 Medicago truncatula HOM05D000361 ORTHO05D007313 1.8e-06 54.7 35 77.1
Psat7g090360 Pisum sativum HOM05D000361 ORTHO05D007313 1.8e-06 54.7 35 77.1
PGR042G0058 Punica granatum HOM05D000361 ORTHO05D007313 1.8e-06 54.7 35 77.1
TWI73G0468 Tripterygium wilfordii HOM05D000361 ORTHO05D007313 1.8e-06 54.7 35 77.1
Ah.09g232710 Amaranthus hybridus HOM05D000736 ORTHO05D007313 2.4e-06 54.3 35 74.3
CSS0047698 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
CiPaw.10G092900 Carya illinoinensis HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
AUR62027610 Chenopodium quinoa HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
AUR62030235 Chenopodium quinoa HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
Ciclev10017750m.g Citrus clementina HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
Duzib160G0935 Durio zibethinus HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
Glyma.05G129700 Glycine max HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 77.1
Glyma.08G084400 Glycine max HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 77.1
Gohir.A10G039500 Gossypium hirsutum HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
Gohir.D05G152200 Gossypium hirsutum HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
Gohir.D10G040300 Gossypium hirsutum HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
Gorai.009G156300 Gossypium raimondii HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
Gorai.011G042400 Gossypium raimondii HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
Manes.17G068400 Manihot esculenta HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
Potri.004G131600 Populus trichocarpa HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
Rhsim13G0194100 Rhododendron simsii HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
Sabra04G0086300 Salix brachista HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
Thecc.06G152900 Theobroma cacao HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
vmacro22572 Vaccinium macrocarpon HOM05D000361 ORTHO05D007313 2.4e-06 54.3 35 74.3
CsaV3_6G051630 Cucumis sativus L. HOM05D000361 ORTHO05D007313 3.1e-06 53.9 35 77.1
Lj1A1185G63 Lonicera japonica HOM05D000361 ORTHO05D007313 3.1e-06 53.9 35 74.3
CDE02G2269 Ceratophyllum demersum HOM05D000361 ORTHO05D007313 4.0e-06 53.5 35 74.3
COL.COLO4_38291 Corchorus olitorius HOM05D000361 ORTHO05D007313 4.0e-06 53.5 35 74.3
Nn3g20692 Nelumbo nucifera HOM05D000361 ORTHO05D007313 4.0e-06 53.5 35 77.1
Actinidia16720 Actinidia chinensis HOM05D000361 ORTHO05D007313 5.3e-06 53.1 35 71.4
Manes.15G120100 Manihot esculenta HOM05D000361 ORTHO05D007313 5.3e-06 53.1 35 74.3
EL10As10g23969 Beta vulgaris HOM05D000361 ORTHO05D007313 6.9e-06 52.8 35 71.4
Cpa.g.sc166.27 Carica papaya HOM05D000361 ORTHO05D007313 6.9e-06 52.8 35 74.3
Aqoxy1G01748 Aquilegia oxysepala HOM05D000361 ORTHO05D007313 9.0e-06 52.4 35 74.3
Dinv32273 Davidia involucrata HOM05D000361 ORTHO05D007313 9.0e-06 52.4 35 74.3
Lj4g0025504 Lotus japonicus HOM05D000361 ORTHO05D007313 9.0e-06 52.4 35 71.4


User provided reference genes

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