Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p32880 Brassica napus HOM05D005650 ORTHO05D007020 1.5e-74 282.7 143 100.0
A07p26920 Brassica napus HOM05D005650 ORTHO05D007020 5.7e-53 211.1 137 84.7
C06p29600 Brassica napus HOM05D005650 ORTHO05D007020 7.5e-53 210.7 137 83.9
BcaC08g45346 Brassica carinata HOM05D005650 ORTHO05D007020 2.2e-52 209.1 137 83.2
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 3.7e-52 208.4 137 82.5
BraA07t30337Z Brassica rapa HOM05D005650 ORTHO05D007020 1.7e-49 199.5 156 74.4
BolC6t38125H Brassica oleracea HOM05D005650 ORTHO05D007020 2.9e-49 198.7 157 73.2
Sp5g34830 Schrenkiella parvula HOM05D005650 ORTHO05D007020 2.5e-48 195.7 137 78.1
AT1G80910 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 1.6e-47 193.0 137 74.5
Carub.0002s2663 Capsella rubella HOM05D005650 ORTHO05D007020 2.7e-47 192.2 137 75.2
Aa31LG4G1220 Aethionema arabicum HOM05D005650 ORTHO05D007020 4.7e-47 191.4 137 73.7
CARHR073550 Cardamine hirsuta HOM05D005650 ORTHO05D007020 6.1e-47 191.0 137 74.5
Thhalv10018445m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 3.0e-46 188.7 137 73.7
AL2G40470 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 4.0e-46 188.3 137 74.5
Ciclev10014948m.g Citrus clementina HOM05D005650 ORTHO05D007020 8.6e-41 170.6 137 67.2
Prupe.7G053000 Prunus persica HOM05D005650 ORTHO05D007020 8.6e-41 170.6 137 68.6
PSO063G5777 Papaver somniferum HOM05D005650 ORTHO05D007020 2.5e-40 169.1 137 66.4
PSO782G4204 Papaver somniferum HOM05D005650 ORTHO05D007020 2.5e-40 169.1 137 66.4
CSS0031782 Camellia sinensis var. sinensis HOM05D005650 ORTHO05D007020 3.3e-40 168.7 137 67.2
MD16G1016000 Malus domestica HOM05D005650 ORTHO05D007020 4.2e-40 168.3 137 67.9
Cpa.g.sc362.1 Carica papaya HOM05D005650 ORTHO05D007020 7.2e-40 167.5 137 65.0
Thhalv10007433m.g Eutrema salsugineum HOM05D005650 ORTHO05D007020 7.2e-40 167.5 136 66.9
Aa31LG7G600 Aethionema arabicum HOM05D005650 ORTHO05D007020 1.2e-39 166.8 136 67.6
Hma1.2p1_0192F.1_g083470 Hydrangea macrophylla HOM05D005650 ORTHO05D007020 1.2e-39 166.8 137 65.0
MD13G1018100 Malus domestica HOM05D005650 ORTHO05D007020 1.2e-39 166.8 137 67.2
TAR622G0850 Trochodendron aralioides HOM05D005650 ORTHO05D007020 1.6e-39 166.4 137 65.7
Carub.0001s1582 Capsella rubella HOM05D005650 ORTHO05D007020 2.1e-39 166.0 135 67.4
Cfa015047 Carpinus fangiana HOM05D005650 ORTHO05D007020 2.1e-39 166.0 138 68.1
Hund07852 Selenicereus undatus HOM05D005650 ORTHO05D007020 2.1e-39 166.0 137 62.8
Dinv26372 Davidia involucrata HOM05D005650 ORTHO05D007020 2.8e-39 165.6 137 66.4
CARHR016520 Cardamine hirsuta HOM05D005650 ORTHO05D007020 3.6e-39 165.2 136 66.9
DCAR_023564 Daucus carota HOM05D005650 ORTHO05D007020 3.6e-39 165.2 134 63.4
AL1G28180 Arabidopsis lyrata HOM05D005650 ORTHO05D007020 4.7e-39 164.9 149 63.8
CsaV3_5G014540 Cucumis sativus L. HOM05D005650 ORTHO05D007020 6.1e-39 164.5 137 65.7
AT1G16020 Arabidopsis thaliana HOM05D005650 ORTHO05D007020 1.4e-38 163.3 149 63.1
Aqoxy2G00265 Aquilegia oxysepala HOM05D005650 ORTHO05D007020 1.8e-38 162.9 137 61.3
CiPaw.05G158000 Carya illinoinensis HOM05D005650 ORTHO05D007020 3.0e-38 162.2 138 65.9
MSTRG.23341 Avicennia marina HOM05D005650 ORTHO05D007020 6.8e-38 161.0 138 61.6
CiPaw.06G055300 Carya illinoinensis HOM05D005650 ORTHO05D007020 6.8e-38 161.0 138 67.4
Potri.008G137000 Populus trichocarpa HOM05D005650 ORTHO05D007020 6.8e-38 161.0 137 62.8
Nn8g41275 Nelumbo nucifera HOM05D005650 ORTHO05D007020 1.2e-37 160.2 137 62.0
QL03p037983 Quercus lobata HOM05D005650 ORTHO05D007020 1.2e-37 160.2 138 65.9
THA.LOC104814015 Tarenaya hassleriana HOM05D005650 ORTHO05D007020 1.2e-37 160.2 136 65.4
Sed0001111 Sechium edule HOM05D005650 ORTHO05D007020 1.5e-37 159.8 137 64.2
A09p61060 Brassica napus HOM05D005650 ORTHO05D007020 2.6e-37 159.1 151 62.9
BraA09t41479Z Brassica rapa HOM05D005650 ORTHO05D007020 2.6e-37 159.1 151 62.9
AUR62035393 Chenopodium quinoa HOM05D005650 ORTHO05D007020 3.4e-37 158.7 137 60.6
AUR62036082 Chenopodium quinoa HOM05D005650 ORTHO05D007020 3.4e-37 158.7 137 60.6
Actinidia12402 Actinidia chinensis HOM05D005650 ORTHO05D007020 5.7e-37 157.9 149 61.1
Duzib248G0273 Durio zibethinus HOM05D005650 ORTHO05D007020 7.5e-37 157.5 137 63.5
GSVIVG01011626001 Vitis vinifera HOM05D005650 ORTHO05D007020 7.5e-37 157.5 150 60.7
Gohir.A03G112000 Gossypium hirsutum HOM05D005650 ORTHO05D007020 9.8e-37 157.1 137 63.5
Sabra08G0104500 Salix brachista HOM05D005650 ORTHO05D007020 9.8e-37 157.1 137 62.0
Haze_10848 Corylus avellana HOM05D005650 ORTHO05D007020 1.3e-36 156.8 151 62.3
Rhsim09G0087900 Rhododendron simsii HOM05D005650 ORTHO05D007020 2.2e-36 156.0 137 64.2
RcHm_v2.0_Chr4g0442431 Rosa chinensis HOM05D005650 ORTHO05D007020 2.2e-36 156.0 137 64.2
C08p44650 Brassica napus HOM05D005650 ORTHO05D007020 2.8e-36 155.6 151 61.6
BolC8t52011H Brassica oleracea HOM05D005650 ORTHO05D007020 2.8e-36 155.6 151 61.6
Lj4g0026003 Lotus japonicus HOM05D005650 ORTHO05D007020 2.8e-36 155.6 137 61.3
Manes.15G123300 Manihot esculenta HOM05D005650 ORTHO05D007020 4.9e-36 154.8 137 60.6
Atru.chr11.825 Acer truncatum HOM05D005650 ORTHO05D007020 6.3e-36 154.5 150 59.3
FvH4_4g33280 Fragaria vesca HOM05D005650 ORTHO05D007020 6.3e-36 154.5 137 62.8
Sc14g0006580 Simmondsia chinensis HOM05D005650 ORTHO05D007020 8.3e-36 154.1 137 60.6
Sp1g14330 Schrenkiella parvula HOM05D005650 ORTHO05D007020 1.1e-35 153.7 150 60.7
Thecc.02G307700 Theobroma cacao HOM05D005650 ORTHO05D007020 1.8e-35 152.9 150 59.3
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 3.1e-35 152.1 151 58.3
HanXRQChr17g0565991 Helianthus annuus HOM05D005650 ORTHO05D007020 3.1e-35 152.1 137 62.0
SGA_v2.0_scaffold111G31522 Striga asiatica HOM05D005650 ORTHO05D007020 5.4e-35 151.4 157 54.8
CDE05G1068 Ceratophyllum demersum HOM05D005650 ORTHO05D007020 9.2e-35 150.6 138 60.9
Cc11_g06590 Coffea canephora HOM05D005650 ORTHO05D007020 9.2e-35 150.6 150 58.7
Sed0000862 Sechium edule HOM05D005650 ORTHO05D007020 9.2e-35 150.6 138 61.6
VMungo0251G0664 Vigna mungo HOM05D005650 ORTHO05D007020 9.2e-35 150.6 137 61.3
ECA234G4226 Erigeron canadensis HOM05D005650 ORTHO05D007020 1.6e-34 149.8 137 59.1
Duzib251G0272 Durio zibethinus HOM05D005650 ORTHO05D007020 2.0e-34 149.4 149 58.4
Gohir.D02G136500 Gossypium hirsutum HOM05D005650 ORTHO05D007020 2.0e-34 149.4 150 59.3
Gorai.005G152600 Gossypium raimondii HOM05D005650 ORTHO05D007020 2.0e-34 149.4 150 59.3
TWI74G1652 Tripterygium wilfordii HOM05D005650 ORTHO05D007020 4.5e-34 148.3 150 58.7
VMungo1127G0110 Vigna mungo HOM05D005650 ORTHO05D007020 5.9e-34 147.9 137 59.9
TPR.G19250 Trifolium pratense HOM05D005650 ORTHO05D007020 7.8e-34 147.5 137 59.9
Phvul.011G008500 Phaseolus vulgaris HOM05D005650 ORTHO05D007020 1.0e-33 147.1 137 61.3
Glyma.05G240900 Glycine max HOM05D005650 ORTHO05D007020 1.7e-33 146.4 137 58.4
Os08g0427300 Oryza sativa ssp. japonica HOM05D005650 ORTHO05D007020 3.8e-33 145.2 137 57.7
Solyc02g062110.4 Solanum lycopersicum HOM05D005650 ORTHO05D007020 3.8e-33 145.2 136 61.0
Sopen02g013060 Solanum pennellii HOM05D005650 ORTHO05D007020 3.8e-33 145.2 136 61.0
CAN.G1206.2 Capsicum annuum HOM05D005650 ORTHO05D007020 8.6e-33 144.1 136 60.3
arahy.Tifrunner.gnm1.ann1.L5UDEC Arachis hypogaea HOM05D005650 ORTHO05D007020 1.1e-32 143.7 150 56.7
Psat4g004560 Pisum sativum HOM05D005650 ORTHO05D007020 1.5e-32 143.3 137 59.9
ATR0021G018 Amborella trichopoda HOM05D005650 ORTHO05D007020 2.5e-32 142.5 137 56.9
BcaB03g14509 Brassica carinata HOM05D005650 ORTHO05D007020 2.5e-32 142.5 113 70.8
Nitab4.5_0002337g0070 Nicotiana tabacum HOM05D005650 ORTHO05D007020 2.5e-32 142.5 149 56.4
unitig_21.g20969 Utricularia gibba HOM05D005650 ORTHO05D007020 3.3e-32 142.1 138 55.1
Eucgr.B02693 Eucalyptus grandis HOM05D005650 ORTHO05D007020 5.6e-32 141.4 150 56.0
PGR004G1106 Punica granatum HOM05D005650 ORTHO05D007020 7.3e-32 141.0 151 55.0
Zm00001eb179310 Zea mays HOM05D005650 ORTHO05D007020 1.6e-31 139.8 137 56.2
Lsat_1_v5_gn_4_23420 Lactuca sativa HOM05D005650 ORTHO05D007020 3.6e-31 138.7 150 54.0
CANSAT78G2020 Cannabis sativa HOM05D005650 ORTHO05D007020 4.7e-31 138.3 149 57.0
Medtr8g105900 Medicago truncatula HOM05D005650 ORTHO05D007020 4.7e-31 138.3 150 55.3
arahy.Tifrunner.gnm1.ann1.NIUA4E Arachis hypogaea HOM05D005650 ORTHO05D007020 8.0e-31 137.5 179 47.5
SalBow3G3602 Salvia bowleyana HOM05D005650 ORTHO05D007020 8.0e-31 137.5 161 50.9
SEGI_01999 Sequoiadendron giganteum HOM05D005650 ORTHO05D007020 5.2e-30 134.8 136 54.4
Lalb_Chr14g0362121 Lupinus albus HOM05D005650 ORTHO05D007020 1.5e-29 133.3 137 55.5
Glyma.08G047900 Glycine max HOM05D005650 ORTHO05D007020 2.6e-29 132.5 150 54.7
Lj6C735G0 Lonicera japonica HOM05D005650 ORTHO05D007020 9.2e-27 124.0 104 60.6
SHI04292 Sapria himalayana HOM05D005650 ORTHO05D007020 9.2e-27 124.0 104 62.5
Dinv01894 Davidia involucrata HOM05D005650 ORTHO05D007020 1.2e-26 123.6 132 53.8
Oeu036123.1 Olea europaea HOM05D005650 ORTHO05D007020 7.8e-26 120.9 116 56.9
HPP92_009689 Vanilla planifolia HOM05D005650 ORTHO05D007020 2.3e-25 119.4 105 60.0
FAN07G2273 Fragaria x ananassa HOM05D005650 ORTHO05D007020 6.6e-25 117.9 104 60.6
FAN17G2396 Fragaria x ananassa HOM05D005650 ORTHO05D007020 1.2e-23 113.6 104 57.7
Ah.01g015510 Amaranthus hybridus HOM05D005650 ORTHO05D007020 1.6e-23 113.2 117 54.7
EL10Ac9g20842 Beta vulgaris HOM05D005650 ORTHO05D007020 1.6e-23 113.2 142 48.6
Nitab4.5_0000188g0130 Nicotiana tabacum HOM05D005650 ORTHO05D007020 4.0e-22 108.6 116 55.2
Mapoly0059s0063 Marchantia polymorpha HOM05D005650 ORTHO05D007020 1.5e-21 106.7 137 46.0
C05p23900 Brassica napus HOM05D005650 ORTHO05D007020 4.4e-21 105.1 122 52.5
Pp3c16_7940 Physcomitrium patens HOM05D005650 ORTHO05D007020 4.6e-18 95.1 136 44.1
AagrBONN_evm.TU.Sc2ySwM_117.2271 Anthoceros agrestis HOM05D005650 ORTHO05D007020 1.4e-14 83.6 137 35.8
COL.COLO4_27613 Corchorus olitorius HOM05D005650 ORTHO05D007020 4.0e-14 82.0 74 64.9
SMO146G0258 Selaginella moellendorffii HOM05D005650 ORTHO05D007020 3.4e-13 79.0 137 35.0
Migut.H02363 Erythranthe guttata HOM05D005650 ORTHO05D007020 4.1e-11 72.0 71 54.9
C06p53600 Brassica napus HOM05D005650 ORTHO05D040396 4.3e-08 62.0 40 80.0
Peaxi162Scf00439g00528 Petunia axillaris HOM05D005650 ORTHO05D007020 7.3e-08 61.2 70 52.9


User provided reference genes

Program Settings