Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p26050 Brassica napus HOM05D001285 ORTHO05D000199 4.4e-46 187.6 93 100.0
A01p27760 Brassica napus HOM05D001285 ORTHO05D000199 1.5e-41 172.6 93 93.5
C09p55130 Brassica napus HOM05D001285 ORTHO05D000199 4.7e-40 167.5 93 91.4
C08p11380 Brassica napus HOM05D001285 ORTHO05D000199 2.0e-38 162.2 90 90.0
C03p64080 Brassica napus HOM05D001285 ORTHO05D000199 4.4e-38 161.0 90 88.9
C05p22020 Brassica napus HOM05D001285 ORTHO05D000199 5.8e-38 160.6 85 94.1
A05p21700 Brassica napus HOM05D001285 ORTHO05D000199 2.4e-36 155.2 86 86.0
C07p23590 Brassica napus HOM05D001285 ORTHO05D000199 4.7e-32 141.0 90 76.7
C09p20890 Brassica napus HOM05D001285 ORTHO05D000199 3.1e-31 138.3 85 81.2
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 4.0e-31 137.9 85 82.4
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 5.4e-28 127.5 81 75.3
C09p23470 Brassica napus HOM05D001285 ORTHO05D000199 3.5e-27 124.8 73 79.5
C06p12830 Brassica napus HOM05D001285 ORTHO05D000199 6.0e-27 124.0 73 79.5
C08p09430 Brassica napus HOM05D004489 ORTHO05D000199 7.8e-27 123.6 76 77.6
C05p42600 Brassica napus HOM05D004489 ORTHO05D000199 6.6e-26 120.6 72 79.2
C01p12180 Brassica napus HOM05D004489 ORTHO05D000199 8.6e-26 120.2 73 78.1
BcaB02g07816 Brassica carinata HOM05D001285 ORTHO05D000199 3.3e-25 118.2 88 63.6
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 7.3e-25 117.1 68 82.4
BraA01t02913Z Brassica rapa HOM05D004489 ORTHO05D021897 5.2e-23 110.9 60 88.3
Carub.0006s2832 Capsella rubella HOM05D001285 ORTHO05D000199 1.1e-20 103.2 83 60.2
Carub.0004s0683 Capsella rubella HOM05D001285 ORTHO05D000199 3.2e-20 101.7 80 62.5
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 1.9e-17 92.4 46 97.8
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 5.6e-17 90.9 46 95.7
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 5.6e-17 90.9 46 95.7
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 3.6e-16 88.2 46 93.5
C07p19330 Brassica napus HOM05D004489 ORTHO05D021897 8.1e-16 87.0 46 91.3
C03p69080 Brassica napus HOM05D004489 ORTHO05D000199 1.1e-15 86.7 47 85.1
CARHR104030 Cardamine hirsuta HOM05D001285 ORTHO05D000199 1.1e-15 86.7 80 55.0
BraA05t20715Z Brassica rapa HOM05D001285 ORTHO05D000199 2.9e-13 78.6 80 51.2
BcaC06g30937 Brassica carinata HOM05D001285 ORTHO05D000199 4.9e-13 77.8 80 51.2
BcaNung03065 Brassica carinata HOM05D001285 ORTHO05D000199 4.9e-13 77.8 77 48.1
BcaC05g27108 Brassica carinata HOM05D001285 ORTHO05D000199 6.4e-13 77.4 80 50.0
C03p03120 Brassica napus HOM05D001285 ORTHO05D000199 6.4e-13 77.4 91 40.7
BcaB03g15573 Brassica carinata HOM05D001285 ORTHO05D000199 8.4e-13 77.0 80 51.2
BraA06t25595Z Brassica rapa HOM05D001285 ORTHO05D000199 8.4e-13 77.0 80 50.0
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 8.4e-13 77.0 77 48.1
AL1G60090 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.1e-12 76.6 80 42.5
AT5G45570 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 1.4e-12 76.3 82 46.3
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-12 76.3 77 46.8
C05p38640 Brassica napus HOM05D001285 ORTHO05D000199 1.4e-12 76.3 77 46.8
BolC5t32603H Brassica oleracea HOM05D001285 ORTHO05D021957 1.4e-12 76.3 77 46.8
AL1G51180 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.9e-12 75.9 80 43.8
AL3G30210 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 3.2e-12 75.1 80 43.8
C06p15920 Brassica napus HOM05D001285 ORTHO05D000199 4.2e-12 74.7 80 42.5
Thhalv10002866m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 5.4e-12 74.3 80 42.5
Carub.0005s0342 Capsella rubella HOM05D001285 ORTHO05D000199 9.3e-12 73.6 81 45.7
AT4G08430 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 1.2e-11 73.2 82 45.1
A02p21060 Brassica napus HOM05D001285 ORTHO05D000199 1.2e-11 73.2 71 52.1
A09p31280 Brassica napus HOM05D001285 ORTHO05D000199 1.2e-11 73.2 71 52.1
AL5G16910 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.6e-11 72.8 82 42.7
BcaC08g44187 Brassica carinata HOM05D001285 ORTHO05D000199 2.1e-11 72.4 80 41.2
BolC4t23605H Brassica oleracea HOM05D001285 ORTHO05D000199 2.1e-11 72.4 88 42.0
AL3G40680 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.7e-11 72.0 82 42.7
Carub.0006s2659 Capsella rubella HOM05D001285 ORTHO05D000199 2.7e-11 72.0 57 49.1
A02p26990 Brassica napus HOM05D001285 ORTHO05D000199 3.5e-11 71.6 80 50.0
BcaC02g11078 Brassica carinata HOM05D001285 ORTHO05D000199 4.6e-11 71.2 88 42.0
BraA03t11415Z Brassica rapa HOM05D001285 ORTHO05D000199 4.6e-11 71.2 80 43.8
BraA07t28518Z Brassica rapa HOM05D001285 ORTHO05D000199 4.6e-11 71.2 80 43.8
BolC2t07252H Brassica oleracea HOM05D001285 ORTHO05D000199 6.0e-11 70.9 80 43.8
BraA01t02157Z Brassica rapa HOM05D001285 ORTHO05D000199 6.0e-11 70.9 80 43.8
Thhalv10015545m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.0e-11 70.9 82 47.6
AL8G24550 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.0e-10 70.1 80 43.8
Carub.0027s0004 Capsella rubella HOM05D001285 ORTHO05D000199 3.9e-10 68.2 91 41.8
BcaC04g20925 Brassica carinata HOM05D001285 ORTHO05D000199 5.1e-10 67.8 80 42.5
Carub.0004s0691 Capsella rubella HOM05D001285 ORTHO05D000199 6.6e-10 67.4 90 42.2
BcaC07g38661 Brassica carinata HOM05D001285 ORTHO05D000199 8.7e-10 67.0 84 41.7
C02p49790 Brassica napus HOM05D001285 ORTHO05D000199 8.7e-10 67.0 84 41.7
BcaC07g41747 Brassica carinata HOM05D001285 ORTHO05D000199 1.1e-09 66.6 80 42.5
Thhalv10009813m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.1e-09 66.6 82 45.1
AL3G45900 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.5e-09 66.2 81 40.7
Carub.0003s3058 Capsella rubella HOM05D001285 ORTHO05D000199 1.5e-09 66.2 81 38.3
AL6G40760 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.5e-09 65.5 81 42.0
A02p36790 Brassica napus HOM05D001285 ORTHO05D000199 3.3e-09 65.1 85 42.4
C09p65970 Brassica napus HOM05D001285 ORTHO05D000199 3.3e-09 65.1 85 42.4
BolC9t59420H Brassica oleracea HOM05D001285 ORTHO05D000199 3.3e-09 65.1 85 42.4
BraA02t08671Z Brassica rapa HOM05D001285 ORTHO05D000199 3.3e-09 65.1 85 42.4
CARHR260230 Cardamine hirsuta HOM05D001285 ORTHO05D000199 7.3e-09 63.9 48 56.2
AL3G44710 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 9.6e-09 63.5 48 50.0
AL6G42160 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 9.6e-09 63.5 78 41.0
BcaC05g25966 Brassica carinata HOM05D001285 ORTHO05D000199 9.6e-09 63.5 56 51.8
Thhalv10002320m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 9.6e-09 63.5 59 47.5
CARHR032540 Cardamine hirsuta HOM05D001285 ORTHO05D021957 1.3e-08 63.2 55 50.9
AL4G17640 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.6e-08 62.8 55 45.5
AL4G20190 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.6e-08 62.8 78 41.0
AL1G65960 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.8e-08 62.0 81 38.3
BcaB03g15494 Brassica carinata HOM05D001285 ORTHO05D000199 2.8e-08 62.0 80 41.2
Carub.0008s0707 Capsella rubella HOM05D001285 ORTHO05D000199 2.8e-08 62.0 91 38.5
C02p57920 Brassica napus HOM05D001285 ORTHO05D000199 3.6e-08 61.6 82 41.5
BcaB01g00219 Brassica carinata HOM05D001285 ORTHO05D000199 4.8e-08 61.2 80 41.2
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.8e-08 61.2 48 54.2
C01p17430 Brassica napus HOM05D001285 ORTHO05D000199 6.2e-08 60.8 61 47.5
C01p48530 Brassica napus HOM05D001285 ORTHO05D000199 6.2e-08 60.8 61 45.9
CARHR185190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 6.2e-08 60.8 80 42.5
BcaB06g28698 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-07 59.7 79 40.5
BcaC03g14913 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-07 59.7 82 40.2
A06p22000 Brassica napus HOM05D001285 ORTHO05D000199 1.4e-07 59.7 82 40.2
C02p23920 Brassica napus HOM05D001285 ORTHO05D000199 1.4e-07 59.7 82 40.2
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.4e-07 59.7 55 43.6
A10p12140 Brassica napus HOM05D001285 ORTHO05D000199 1.8e-07 59.3 82 40.2
C03p67770 Brassica napus HOM05D000471 ORTHO05D000199 2.4e-07 58.9 94 36.2
BolC3t17402H Brassica oleracea HOM05D001285 ORTHO05D000199 2.4e-07 58.9 61 47.5
A10p10700 Brassica napus HOM05D001285 ORTHO05D000199 3.1e-07 58.5 82 40.2
Thhalv10002270m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.1e-07 58.5 61 47.5
BcaC03g17776 Brassica carinata HOM05D001285 ORTHO05D000199 4.0e-07 58.2 82 39.0
BcaC05g30530 Brassica carinata HOM05D001285 ORTHO05D000199 4.0e-07 58.2 42 54.8
BraA05t21432Z Brassica rapa HOM05D001285 ORTHO05D000199 4.0e-07 58.2 65 40.0
BolC2t11860H Brassica oleracea HOM05D001285 ORTHO05D000199 5.3e-07 57.8 82 39.0
CARHR289190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 5.3e-07 57.8 55 49.1
AT1G37020 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 6.9e-07 57.4 85 35.3
BcaC08g43423 Brassica carinata HOM05D001285 ORTHO05D000199 6.9e-07 57.4 82 39.0
C02p29930 Brassica napus HOM05D001285 ORTHO05D000199 6.9e-07 57.4 63 44.4
BolC6t35851H Brassica oleracea HOM05D001285 ORTHO05D000199 6.9e-07 57.4 82 39.0
Thhalv10005571m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.9e-07 57.4 65 50.8
BcaB07g33549 Brassica carinata HOM05D000977 ORTHO05D001094 9.0e-07 57.0 91 35.2
A04p14250 Brassica napus HOM05D000977 ORTHO05D001094 9.0e-07 57.0 78 38.5
C04p44910 Brassica napus HOM05D000977 ORTHO05D001094 9.0e-07 57.0 77 39.0
BolC1t02405H Brassica oleracea HOM05D001285 ORTHO05D000199 9.0e-07 57.0 65 40.0
BraA03t15188Z Brassica rapa HOM05D000977 ORTHO05D001094 9.0e-07 57.0 78 38.5
BcaB03g16512 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-06 56.6 79 36.7
C04p21620 Brassica napus HOM05D000977 ORTHO05D001094 1.2e-06 56.6 62 43.5
BolSC21t60244H Brassica oleracea HOM05D000471 ORTHO05D000199 1.2e-06 56.6 82 37.8
BolC9t57495H Brassica oleracea HOM05D000977 ORTHO05D001094 1.5e-06 56.2 62 43.5
BcaC02g09936 Brassica carinata HOM05D000977 ORTHO05D001094 2.0e-06 55.8 78 35.9
C09p43120 Brassica napus HOM05D000977 ORTHO05D001094 2.0e-06 55.8 78 38.5
BolC9t57183H Brassica oleracea HOM05D000977 ORTHO05D001094 2.0e-06 55.8 78 38.5
BcaC04g22378 Brassica carinata HOM05D000977 ORTHO05D001094 2.6e-06 55.5 71 42.3
BolC7t41538H Brassica oleracea HOM05D000977 ORTHO05D001094 2.6e-06 55.5 78 35.9
BraA09t37769Z Brassica rapa HOM05D001285 ORTHO05D000199 2.6e-06 55.5 82 40.2
CARHR153270 Cardamine hirsuta HOM05D001285 ORTHO05D000199 2.6e-06 55.5 57 42.1
Thhalv10000500m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.6e-06 55.5 68 42.6
BolC9t58247H Brassica oleracea HOM05D000977 ORTHO05D001094 3.4e-06 55.1 62 43.5
BcaC02g09888 Brassica carinata HOM05D000977 ORTHO05D001094 4.4e-06 54.7 62 41.9
BolC4t25104H Brassica oleracea HOM05D000977 ORTHO05D001094 4.4e-06 54.7 62 41.9
CARHR177560 Cardamine hirsuta HOM05D001285 ORTHO05D000199 4.4e-06 54.7 51 45.1
BcaC01g02097 Brassica carinata HOM05D001285 ORTHO05D039944 5.8e-06 54.3 77 41.6
BcaC01g02182 Brassica carinata HOM05D000977 ORTHO05D001094 5.8e-06 54.3 78 37.2
BcaC05g25804 Brassica carinata HOM05D000471 ORTHO05D000199 5.8e-06 54.3 81 38.3
BcaC08g43667 Brassica carinata HOM05D000977 ORTHO05D001094 5.8e-06 54.3 62 43.5
C03p68510 Brassica napus HOM05D001285 ORTHO05D039944 5.8e-06 54.3 77 41.6
C06p10910 Brassica napus HOM05D000977 ORTHO05D001094 5.8e-06 54.3 62 43.5
BolC5t30444H Brassica oleracea HOM05D000471 ORTHO05D010016 5.8e-06 54.3 81 38.3
BolC6t36171H Brassica oleracea HOM05D000977 ORTHO05D001094 5.8e-06 54.3 62 43.5
BolSC21t60291H Brassica oleracea HOM05D000977 ORTHO05D001094 5.8e-06 54.3 78 37.2
CARHR116190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 5.8e-06 54.3 84 38.1
BcaC04g20474 Brassica carinata HOM05D000977 ORTHO05D001094 7.6e-06 53.9 78 37.2
C01p37340 Brassica napus HOM05D000977 ORTHO05D001094 7.6e-06 53.9 62 41.9
BcaB06g28518 Brassica carinata HOM05D000977 ORTHO05D001094 9.9e-06 53.5 71 38.0
BolC8t47821H Brassica oleracea HOM05D000977 ORTHO05D001094 9.9e-06 53.5 78 34.6
BolC9t55617H Brassica oleracea HOM05D000471 ORTHO05D000199 9.9e-06 53.5 94 34.0


User provided reference genes

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