Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p24240 Brassica napus HOM05D004020 ORTHO05D004735 3.7e-174 614.8 308 100.0
C06p19250 Brassica napus HOM05D004020 ORTHO05D004735 9.5e-146 520.4 308 87.7
BcaC01g02437 Brassica carinata HOM05D004020 ORTHO05D004735 1.5e-98 363.6 221 84.6
BolC3t15517H Brassica oleracea HOM05D004020 ORTHO05D004735 8.5e-78 294.7 262 65.6
BcaB01g03084 Brassica carinata HOM05D004020 ORTHO05D004735 4.6e-76 288.9 262 64.5
BcaC01g04955 Brassica carinata HOM05D004020 ORTHO05D004735 6.1e-76 288.5 262 64.5
C03p31750 Brassica napus HOM05D004020 ORTHO05D004735 6.1e-76 288.5 262 64.5
A03p26460 Brassica napus HOM05D004020 ORTHO05D004735 1.8e-75 287.0 262 64.1
Thhalv10016162m.g Eutrema salsugineum HOM05D004020 ORTHO05D004735 4.3e-74 282.3 262 63.0
AT2G27900 Arabidopsis thaliana HOM05D004020 ORTHO05D004735 6.9e-72 275.0 260 60.8
A04p21190 Brassica napus HOM05D004020 ORTHO05D004735 4.5e-71 272.3 262 61.1
BraA04t17688Z Brassica rapa HOM05D004020 ORTHO05D004735 4.5e-71 272.3 262 61.1
Aa31LG5G8160 Aethionema arabicum HOM05D004020 ORTHO05D004735 7.7e-71 271.6 258 60.9
C04p57020 Brassica napus HOM05D004020 ORTHO05D004735 5.0e-70 268.9 262 59.9
BolC4t27237H Brassica oleracea HOM05D004020 ORTHO05D004735 5.0e-70 268.9 262 59.9
Carub.0004s0864 Capsella rubella HOM05D004020 ORTHO05D004735 8.5e-70 268.1 259 60.2
BcaB06g28175 Brassica carinata HOM05D004020 ORTHO05D004735 1.1e-69 267.7 262 60.3
Sp4g10720 Schrenkiella parvula HOM05D004020 ORTHO05D004735 1.9e-69 266.9 260 59.6
CARHR120590 Cardamine hirsuta HOM05D004020 ORTHO05D004735 3.2e-69 266.2 257 59.9
BcaC02g08224 Brassica carinata HOM05D004020 ORTHO05D004735 9.4e-69 264.6 259 59.8
AL4G22350 Arabidopsis lyrata HOM05D004020 ORTHO05D004735 1.4e-67 260.8 260 58.5
C03p65310 Brassica napus HOM05D004020 ORTHO05D004735 4.8e-65 252.3 234 63.7
THA.LOC104826398 Tarenaya hassleriana HOM05D004020 ORTHO05D004735 1.4e-64 250.8 258 55.4
THA.LOC104800567 Tarenaya hassleriana HOM05D004020 ORTHO05D004735 7.7e-63 245.0 257 55.3
Manes.11G154000 Manihot esculenta HOM05D004020 ORTHO05D004735 6.5e-62 241.9 257 52.9
GSVIVG01031444001 Vitis vinifera HOM05D004020 ORTHO05D004735 3.6e-60 236.1 256 52.3
Gohir.D05G087200 Gossypium hirsutum HOM05D004020 ORTHO05D004735 1.8e-59 233.8 256 52.3
Gorai.009G089000 Gossypium raimondii HOM05D004020 ORTHO05D004735 1.8e-59 233.8 256 52.3
Thecc.09G295800 Theobroma cacao HOM05D004020 ORTHO05D004735 1.8e-59 233.8 256 52.7
CSS0033419 Camellia sinensis var. sinensis HOM05D004020 ORTHO05D004735 2.3e-59 233.4 255 51.4
Actinidia24157 Actinidia chinensis HOM05D004020 ORTHO05D004735 3.9e-59 232.6 258 50.8
Glyma.11G191100 Glycine max HOM05D004020 ORTHO05D004735 3.9e-59 232.6 251 53.0
Atru.chr3.3492 Acer truncatum HOM05D004020 ORTHO05D004735 5.2e-59 232.3 258 52.7
Potri.009G002900 Populus trichocarpa HOM05D004020 ORTHO05D004735 5.2e-59 232.3 256 52.0
Aqoxy2G01562 Aquilegia oxysepala HOM05D004020 ORTHO05D004735 6.7e-59 231.9 257 51.0
TAR633G0695 Trochodendron aralioides HOM05D004020 ORTHO05D004735 6.7e-59 231.9 259 51.4
Glyma.12G083200 Glycine max HOM05D004020 ORTHO05D004735 8.8e-59 231.5 251 52.2
Gohir.A05G084400 Gossypium hirsutum HOM05D004020 ORTHO05D004735 1.1e-58 231.1 256 52.0
Phvul.011G088000 Phaseolus vulgaris HOM05D004020 ORTHO05D004735 2.0e-58 230.3 250 51.6
Rhsim13G0102300 Rhododendron simsii HOM05D004020 ORTHO05D004735 2.0e-58 230.3 261 49.8
Lj3g0000902 Lotus japonicus HOM05D004020 ORTHO05D004735 3.3e-58 229.6 251 51.8
Gohir.D07G110000 Gossypium hirsutum HOM05D004020 ORTHO05D004735 7.4e-58 228.4 256 50.4
MBI18_g10967_MAGBIO Magnolia biondii HOM05D004020 ORTHO05D004735 7.4e-58 228.4 258 50.4
COL.COLO4_19229 Corchorus olitorius HOM05D004020 ORTHO05D004735 9.7e-58 228.0 256 50.8
Lj2A1002G14 Lonicera japonica HOM05D004020 ORTHO05D004735 1.3e-57 227.6 255 50.6
Sabra04G0148500 Salix brachista HOM05D004020 ORTHO05D004735 1.3e-57 227.6 256 52.0
Actinidia07194 Actinidia chinensis HOM05D004020 ORTHO05D004735 1.7e-57 227.3 250 50.4
Duzib150G0506 Durio zibethinus HOM05D004020 ORTHO05D004735 1.7e-57 227.3 255 51.4
Nn2g13902 Nelumbo nucifera HOM05D004020 ORTHO05D004735 2.2e-57 226.9 257 51.0
Os10g0546300 Oryza sativa ssp. japonica HOM05D004020 ORTHO05D004735 2.2e-57 226.9 257 50.6
Psat7g191400 Pisum sativum HOM05D004020 ORTHO05D004735 2.2e-57 226.9 252 51.2
EL10Ac9g20998 Beta vulgaris HOM05D004020 ORTHO05D004735 2.8e-57 226.5 256 52.3
Duzib168G0446 Durio zibethinus HOM05D004020 ORTHO05D004735 3.7e-57 226.1 256 50.8
FvH4_3g30380 Fragaria vesca HOM05D004020 ORTHO05D004735 3.7e-57 226.1 256 50.8
Gohir.A07G106066 Gossypium hirsutum HOM05D004020 ORTHO05D004735 3.7e-57 226.1 256 50.0
vmacro03245 Vaccinium macrocarpon HOM05D004020 ORTHO05D004735 3.7e-57 226.1 247 51.4
PGR102G0426 Punica granatum HOM05D004020 ORTHO05D004735 4.8e-57 225.7 256 50.8
Ah.01g015940 Amaranthus hybridus HOM05D004020 ORTHO05D004735 8.2e-57 224.9 256 52.3
Medtr4g056510 Medicago truncatula HOM05D004020 ORTHO05D004735 1.1e-56 224.6 252 51.2
Zm00001eb022740 Zea mays HOM05D004020 ORTHO05D004735 1.1e-56 224.6 257 51.0
AUR62024038 Chenopodium quinoa HOM05D004020 ORTHO05D004735 1.4e-56 224.2 259 51.7
FAN11G1674 Fragaria x ananassa HOM05D004020 ORTHO05D004735 1.4e-56 224.2 256 50.4
TWI75G0197 Tripterygium wilfordii HOM05D004020 ORTHO05D004735 1.4e-56 224.2 256 50.8
Ciclev10027713m.g Citrus clementina HOM05D004020 ORTHO05D004735 1.8e-56 223.8 258 51.2
Migut.D02305 Erythranthe guttata HOM05D004020 ORTHO05D004735 1.8e-56 223.8 256 49.6
Nitab4.5_0000173g0340 Nicotiana tabacum HOM05D004020 ORTHO05D004735 2.4e-56 223.4 253 49.8
Potri.001G212600 Populus trichocarpa HOM05D004020 ORTHO05D004735 3.1e-56 223.0 256 50.0
arahy.Tifrunner.gnm1.ann1.B084HG Arachis hypogaea HOM05D004020 ORTHO05D004735 4.1e-56 222.6 250 50.8
MD03G1129700 Malus domestica HOM05D004020 ORTHO05D004735 4.1e-56 222.6 256 50.0
arahy.Tifrunner.gnm1.ann1.PN7A9Z Arachis hypogaea HOM05D004020 ORTHO05D004735 5.3e-56 222.2 250 50.0
RcHm_v2.0_Chr5g0056331 Rosa chinensis HOM05D004020 ORTHO05D004735 7.0e-56 221.9 256 50.4
Lalb_Chr01g0004661 Lupinus albus HOM05D004020 ORTHO05D004735 9.1e-56 221.5 256 51.2
MD11G1151500 Malus domestica HOM05D004020 ORTHO05D004735 9.1e-56 221.5 256 49.6
FAN21G0469 Fragaria x ananassa HOM05D004020 ORTHO05D004735 1.2e-55 221.1 248 52.0
MSTRG.18711 Avicennia marina HOM05D004020 ORTHO05D004735 1.6e-55 220.7 256 48.4
Ca_19329_v3 Cicer arietinum L. HOM05D004020 ORTHO05D004735 1.6e-55 220.7 252 49.2
TPR.G35043 Trifolium pratense HOM05D004020 ORTHO05D004735 1.6e-55 220.7 252 50.0
Sed0021294 Sechium edule HOM05D004020 ORTHO05D004735 7.7e-55 218.4 254 48.4
Cfa010130 Carpinus fangiana HOM05D004020 ORTHO05D004735 1.3e-54 217.6 256 49.2
CsaV3_1G014440 Cucumis sativus L. HOM05D004020 ORTHO05D004735 1.3e-54 217.6 256 48.0
Hund07762 Selenicereus undatus HOM05D004020 ORTHO05D004735 1.3e-54 217.6 256 48.4
SalBow6G5048 Salvia bowleyana HOM05D004020 ORTHO05D004735 1.7e-54 217.2 256 49.2
CiPaw.14G105600 Carya illinoinensis HOM05D004020 ORTHO05D004735 2.2e-54 216.9 256 48.0
MELO3C004814.2 Cucumis melo HOM05D004020 ORTHO05D004735 5.0e-54 215.7 256 47.7
arahy.Tifrunner.gnm1.ann1.533Y7U Arachis hypogaea HOM05D004020 ORTHO05D004735 8.5e-54 214.9 250 49.2
arahy.Tifrunner.gnm1.ann1.MMVL4X Arachis hypogaea HOM05D004020 ORTHO05D004735 8.5e-54 214.9 250 49.6
Lsat_1_v5_gn_6_42101 Lactuca sativa HOM05D004020 ORTHO05D004735 8.5e-54 214.9 260 47.7
Lalb_Chr19g0136831 Lupinus albus HOM05D004020 ORTHO05D004735 8.5e-54 214.9 256 50.0
Sopen11g026290 Solanum pennellii HOM05D004020 ORTHO05D004735 1.1e-53 214.5 253 49.0
PSO801G0568 Papaver somniferum HOM05D004020 ORTHO05D004735 1.5e-53 214.2 259 48.3
Peaxi162Scf00150g00917 Petunia axillaris HOM05D004020 ORTHO05D004735 1.5e-53 214.2 245 50.6
HanXRQChr14g0451831 Helianthus annuus HOM05D004020 ORTHO05D004735 2.5e-53 213.4 257 48.2
PSO339G0247 Papaver somniferum HOM05D004020 ORTHO05D004735 2.5e-53 213.4 259 48.3
CAN.G644.49 Capsicum annuum HOM05D004020 ORTHO05D004735 3.2e-53 213.0 253 49.0
HanXRQChr02g0055251 Helianthus annuus HOM05D004020 ORTHO05D004735 3.2e-53 213.0 259 47.1
CDE08G1223 Ceratophyllum demersum HOM05D004020 ORTHO05D004735 1.6e-52 210.7 255 47.1
Cc01_g10110 Coffea canephora HOM05D004020 ORTHO05D004735 4.7e-52 209.1 258 46.9
Lsat_1_v5_gn_2_99000 Lactuca sativa HOM05D004020 ORTHO05D004735 1.0e-51 208.0 260 46.2
ECA238G2607 Erigeron canadensis HOM05D004020 ORTHO05D004735 1.8e-51 207.2 258 46.9
ATR1158G033 Amborella trichopoda HOM05D004020 ORTHO05D004735 3.0e-51 206.5 254 47.2
unitig_746.g26602 Utricularia gibba HOM05D004020 ORTHO05D004735 8.8e-51 204.9 257 45.5
Prupe.6G114700 Prunus persica HOM05D004020 ORTHO05D004735 1.1e-48 198.0 256 47.3
Sc06g0008980 Simmondsia chinensis HOM05D004020 ORTHO05D004735 1.1e-48 198.0 221 52.0
CANSAT64G1975 Cannabis sativa HOM05D004020 ORTHO05D004735 1.0e-43 181.4 211 49.3
SGA_v2.0_scaffold27G11582 Striga asiatica HOM05D004020 ORTHO05D004735 8.3e-41 171.8 368 34.5
QL01p014670 Quercus lobata HOM05D004020 ORTHO05D004735 1.4e-40 171.0 363 34.4
Hma1.2p1_1225F.1_g268540 Hydrangea macrophylla HOM05D004020 ORTHO05D004735 3.5e-39 166.4 137 64.2
Mapoly0001s0255 Marchantia polymorpha HOM05D004020 ORTHO05D004735 1.3e-38 164.5 254 38.2
AUR62041305 Chenopodium quinoa HOM05D004020 ORTHO05D004735 1.7e-38 164.1 225 46.7
Haze_23515 Corylus avellana HOM05D004020 ORTHO05D004735 2.8e-36 156.8 153 55.6
SMO118G0476 Selaginella moellendorffii HOM05D004020 ORTHO05D004735 2.8e-36 156.8 257 35.8
AagrBONN_evm.TU.Sc2ySwM_340.402 Anthoceros agrestis HOM05D004020 ORTHO05D004735 3.6e-36 156.4 254 37.4
Pp3c16_8720 Physcomitrium patens HOM05D004020 ORTHO05D004735 4.7e-36 156.0 255 34.9
Pp3c5_16860 Physcomitrium patens HOM05D004020 ORTHO05D004735 8.0e-36 155.2 255 34.9
DCAR_031637 Daucus carota HOM05D004020 ORTHO05D004735 5.7e-34 149.1 132 59.8
Lj2C1000T6 Lonicera japonica HOM05D004020 ORTHO05D004735 9.8e-34 148.3 134 58.2
Oeu007301.5 Olea europaea HOM05D004020 ORTHO05D004735 1.3e-33 147.9 254 39.0
HPP92_022573 Vanilla planifolia HOM05D004020 ORTHO05D004735 2.8e-33 146.7 138 57.2
TAR633G2769 Trochodendron aralioides HOM05D004020 ORTHO05D004735 5.4e-32 142.5 131 58.0
arahy.Tifrunner.gnm1.ann1.FLM5Q5 Arachis hypogaea HOM05D004020 ORTHO05D004735 9.2e-32 141.7 213 39.4
BolC3t18785H Brassica oleracea HOM05D004801 ORTHO05D004735 3.6e-28 129.8 103 69.9
SHI06179 Sapria himalayana HOM05D004020 ORTHO05D004735 2.0e-26 124.0 133 51.1
AagrBONN_evm.TU.Sc2ySwM_117.107 Anthoceros agrestis HOM05D004020 ORTHO05D004735 2.7e-23 113.6 250 30.8
ClCG01G012880 Citrullus lanatus HOM05D004020 ORTHO05D004735 3.1e-19 100.1 94 58.5
Cpa.g.sc47.18 Carica papaya HOM05D004020 ORTHO05D004735 1.2e-18 98.2 99 54.5
CANSAT64G1073 Cannabis sativa HOM05D004020 ORTHO05D004735 2.2e-17 94.0 94 53.2
PRCOL_00006567 Prasinoderma coloniale HOM05D004020 ORTHO05D004735 3.2e-16 90.1 283 27.2
MCO09G744 Micromonas commoda HOM05D004020 ORTHO05D004735 3.0e-14 83.6 254 26.4
Dinv12567 Davidia involucrata HOM05D004020 ORTHO05D004735 1.5e-13 81.3 65 58.5
Hund00854 Selenicereus undatus HOM05D004020 ORTHO05D004735 4.3e-13 79.7 65 61.5
Eucgr.B03912 Eucalyptus grandis HOM05D004020 ORTHO05D004735 1.2e-12 78.2 128 37.5
arahy.Tifrunner.gnm1.ann1.LCV131 Arachis hypogaea HOM05D004020 ORTHO05D004735 2.8e-12 77.0 127 38.6
ClCG01G012850 Citrullus lanatus HOM05D004020 ORTHO05D004735 6.2e-12 75.9 76 48.7
AL4G12830 Arabidopsis lyrata HOM05D004020 ORTHO05D004735 8.9e-11 72.0 45 84.4
DCAR_031639 Daucus carota HOM05D004020 ORTHO05D004735 4.4e-10 69.7 65 47.7
Cre10.g443350 Chlamydomonas reinhardtii HOM05D004020 ORTHO05D004735 9.2e-08 62.0 273 24.9


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