Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p13820 Brassica napus HOM05D000082 ORTHO05D007743 1.6e-106 389.4 192 100.0
BcaC08g43979 Brassica carinata HOM05D000082 ORTHO05D007743 3.4e-69 265.4 151 92.1
A03p10340 Brassica napus HOM05D000278 ORTHO05D004673 6.9e-62 241.1 169 77.5
Sp6g23610 Schrenkiella parvula HOM05D000082 ORTHO05D007743 1.5e-61 240.0 166 77.7
BcaNung05757 Brassica carinata HOM05D000082 ORTHO05D007743 4.5e-61 238.4 167 77.2
C03p11870 Brassica napus HOM05D000278 ORTHO05D004673 4.5e-61 238.4 167 77.2
Thhalv10014170m.g Eutrema salsugineum HOM05D000082 ORTHO05D007743 2.5e-59 232.6 167 74.3
CARHR191940 Cardamine hirsuta HOM05D000082 ORTHO05D007743 1.2e-58 230.3 166 74.1
AL6G32470 Arabidopsis lyrata HOM05D000082 ORTHO05D007743 2.1e-58 229.6 166 73.5
AT5G20910 Arabidopsis thaliana HOM05D000082 ORTHO05D007743 4.6e-58 228.4 166 72.3
Carub.0006s1920 Capsella rubella HOM05D000082 ORTHO05D007743 5.1e-57 224.9 167 72.5
Aa31LG1G13850 Aethionema arabicum HOM05D000082 ORTHO05D007743 1.5e-53 213.4 166 68.7
THA.LOC104810973 Tarenaya hassleriana HOM05D000082 ORTHO05D007743 7.4e-48 194.5 179 62.6
Duzib150G1135 Durio zibethinus HOM05D000082 ORTHO05D007743 2.0e-37 159.8 173 53.8
Gohir.A06G081400 Gossypium hirsutum HOM05D000082 ORTHO05D007743 1.3e-36 157.1 179 52.0
Thecc.09G066800 Theobroma cacao HOM05D000082 ORTHO05D007743 5.0e-36 155.2 179 51.4
COL.COLO4_21172 Corchorus olitorius HOM05D000082 ORTHO05D007743 6.5e-36 154.8 179 51.4
Manes.16G088000 Manihot esculenta HOM05D000082 ORTHO05D007743 6.5e-36 154.8 179 52.5
TWI63G0835 Tripterygium wilfordii HOM05D000082 ORTHO05D007743 8.5e-36 154.5 179 52.5
Gohir.D06G081000 Gossypium hirsutum HOM05D000082 ORTHO05D007743 5.5e-35 151.8 179 50.8
Cpa.g.sc82.22 Carica papaya HOM05D000082 ORTHO05D007743 7.2e-35 151.4 179 51.4
Gorai.010G094400 Gossypium raimondii HOM05D000082 ORTHO05D007743 7.2e-35 151.4 179 50.8
Actinidia01322 Actinidia chinensis HOM05D000082 ORTHO05D007743 1.2e-34 150.6 201 46.8
Ciclev10008969m.g Citrus clementina HOM05D000082 ORTHO05D007743 1.6e-34 150.2 183 50.8
Atru.chr7.1811 Acer truncatum HOM05D000082 ORTHO05D007743 2.1e-34 149.8 181 51.4
Lj7C205T1 Lonicera japonica HOM05D000082 ORTHO05D007743 8.0e-34 147.9 171 49.7
BolC6t36554H Brassica oleracea HOM05D000082 ORTHO05D007743 1.8e-33 146.7 75 100.0
ECA240G1377 Erigeron canadensis HOM05D000082 ORTHO05D007743 2.3e-33 146.4 185 43.8
HanXRQChr09g0248291 Helianthus annuus HOM05D000082 ORTHO05D007743 2.3e-33 146.4 183 46.4
Glyma.14G105900 Glycine max HOM05D000082 ORTHO05D007743 6.7e-33 144.8 176 49.4
Potri.006G217600 Populus trichocarpa HOM05D000082 ORTHO05D007743 6.7e-33 144.8 175 48.0
CSS0031449 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D007743 8.8e-33 144.4 175 47.4
arahy.Tifrunner.gnm1.ann1.9Z4RH8 Arachis hypogaea HOM05D000082 ORTHO05D007743 1.2e-32 144.1 178 48.9
arahy.Tifrunner.gnm1.ann1.GHB8SH Arachis hypogaea HOM05D000082 ORTHO05D007743 1.2e-32 144.1 177 49.2
CANSAT25G3535 Cannabis sativa HOM05D000082 ORTHO05D007743 1.2e-32 144.1 180 47.8
Migut.E01466 Erythranthe guttata HOM05D000082 ORTHO05D007743 1.2e-32 144.1 174 48.3
CiPaw.16G071800 Carya illinoinensis HOM05D000082 ORTHO05D007743 1.5e-32 143.7 182 49.5
Hma1.2p1_0920F.1_g236580 Hydrangea macrophylla HOM05D000082 ORTHO05D007743 2.0e-32 143.3 179 48.6
Nitab4.5_0009154g0010 Nicotiana tabacum HOM05D000082 ORTHO05D007743 2.0e-32 143.3 178 48.3
Peaxi162Scf00922g00002 Petunia axillaris HOM05D000082 ORTHO05D007743 2.0e-32 143.3 173 48.0
Phvul.001G043900 Phaseolus vulgaris HOM05D000082 ORTHO05D007743 2.0e-32 143.3 177 50.3
MSTRG.1634 Avicennia marina HOM05D000082 ORTHO05D007743 2.6e-32 142.9 176 47.7
VMungo0647G2039 Vigna mungo HOM05D000082 ORTHO05D007743 2.6e-32 142.9 177 49.7
Lalb_Chr24g0393731 Lupinus albus HOM05D000082 ORTHO05D007743 3.3e-32 142.5 176 50.0
Nitab4.5_0015655g0010 Nicotiana tabacum HOM05D000082 ORTHO05D007743 3.3e-32 142.5 178 48.9
unitig_0.g2182 Utricularia gibba HOM05D000082 ORTHO05D007743 3.3e-32 142.5 170 48.2
Lsat_1_v5_gn_7_59260 Lactuca sativa HOM05D000082 ORTHO05D007743 4.4e-32 142.1 188 45.2
Cfa017843 Carpinus fangiana HOM05D000082 ORTHO05D007743 7.5e-32 141.4 180 47.8
Sabra06G0167800 Salix brachista HOM05D000082 ORTHO05D007743 7.5e-32 141.4 175 46.9
Glyma.17G220500 Glycine max HOM05D000082 ORTHO05D007743 9.7e-32 141.0 176 49.4
MD15G1046800 Malus domestica HOM05D000082 ORTHO05D007743 1.7e-31 140.2 198 43.9
PGR044G1353 Punica granatum HOM05D000082 ORTHO05D007743 1.7e-31 140.2 171 47.4
Ca_13085_v3 Cicer arietinum L. HOM05D000082 ORTHO05D007743 3.7e-31 139.0 176 46.6
DCAR_004369 Daucus carota HOM05D000082 ORTHO05D007743 3.7e-31 139.0 175 48.0
Lj5g0022807 Lotus japonicus HOM05D000082 ORTHO05D007743 3.7e-31 139.0 177 48.0
ClCG05G015970 Citrullus lanatus HOM05D000082 ORTHO05D007743 6.3e-31 138.3 184 46.7
Haze_18365 Corylus avellana HOM05D000082 ORTHO05D007743 1.1e-30 137.5 186 46.8
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 1.4e-30 137.1 176 44.3
MD08G1045000 Malus domestica HOM05D000082 ORTHO05D007743 2.4e-30 136.3 172 46.5
Sed0005903 Sechium edule HOM05D000082 ORTHO05D007743 2.4e-30 136.3 183 45.9
Cc08_g07820 Coffea canephora HOM05D000082 ORTHO05D007743 3.1e-30 136.0 175 46.9
TPR.G38904 Trifolium pratense HOM05D000082 ORTHO05D007743 5.3e-30 135.2 176 47.7
Medtr1g014710 Medicago truncatula HOM05D000082 ORTHO05D007743 7.0e-30 134.8 176 45.5
Prupe.1G401200 Prunus persica HOM05D006336 ORTHO05D007819 7.0e-30 134.8 176 48.3
Rhsim12G0139000 Rhododendron simsii HOM05D000082 ORTHO05D007743 7.0e-30 134.8 175 44.6
TAR624G0119 Trochodendron aralioides HOM05D000082 ORTHO05D007743 2.0e-29 133.3 178 44.4
Eucgr.C03179 Eucalyptus grandis HOM05D000082 ORTHO05D007743 2.7e-29 132.9 180 47.2
Solyc08g067290.3 Solanum lycopersicum HOM05D000082 ORTHO05D007743 5.9e-29 131.7 176 45.5
Psat6g024320 Pisum sativum HOM05D000082 ORTHO05D007743 1.3e-28 130.6 176 44.9
Sopen08g021220 Solanum pennellii HOM05D000082 ORTHO05D007743 2.2e-28 129.8 176 46.6
PGSC0003DMG400007377 Solanum tuberosum HOM05D000082 ORTHO05D007743 2.2e-28 129.8 176 46.6
vmacro16415 Vaccinium macrocarpon HOM05D000082 ORTHO05D007743 3.8e-28 129.0 200 42.0
CsaV3_4G036260 Cucumis sativus L. HOM05D000082 ORTHO05D007743 6.5e-28 128.3 201 42.8
PSO724G0255 Papaver somniferum HOM05D000082 ORTHO05D007743 1.1e-27 127.5 181 43.1
GSVIVG01035508001 Vitis vinifera HOM05D000082 ORTHO05D007743 1.5e-27 127.1 184 45.1
FvH4_2g37060 Fragaria vesca HOM05D000082 ORTHO05D007743 4.2e-27 125.6 177 44.6
MBI13_g01682_MAGBIO Magnolia biondii HOM05D000082 ORTHO05D007743 4.2e-27 125.6 197 42.1
FAN06G0753 Fragaria x ananassa HOM05D000082 ORTHO05D007743 5.5e-27 125.2 177 44.6
FAN06G3381 Fragaria x ananassa HOM05D000082 ORTHO05D007743 5.5e-27 125.2 177 44.6
A09p23530 Brassica napus HOM05D000082 ORTHO05D007743 2.1e-26 123.2 77 88.3
FAN25G1293 Fragaria x ananassa HOM05D000082 ORTHO05D007743 4.7e-26 122.1 176 43.2
RcHm_v2.0_Chr6g0304721 Rosa chinensis HOM05D000082 ORTHO05D007743 4.7e-26 122.1 178 43.3
FAN07G0416 Fragaria x ananassa HOM05D000116 ORTHO05D007743 6.1e-26 121.7 177 44.1
FAN21G1538 Fragaria x ananassa HOM05D000082 ORTHO05D007743 8.0e-26 121.3 177 44.1
PSO135G0672 Papaver somniferum HOM05D000082 ORTHO05D007743 8.0e-26 121.3 180 43.3
FAN21G0679 Fragaria x ananassa HOM05D000082 ORTHO05D007743 1.4e-25 120.6 177 44.1
Aqoxy7G04170 Aquilegia oxysepala HOM05D000082 ORTHO05D007743 8.8e-25 117.9 173 40.5
MD08G1045700 Malus domestica HOM05D000082 ORTHO05D007743 1.5e-24 117.1 185 43.2
Zm00001eb099970 Zea mays HOM05D000082 ORTHO05D007743 3.4e-24 115.9 185 41.1
EL10As3g23312 Beta vulgaris HOM05D000082 ORTHO05D007743 4.4e-24 115.5 175 46.9
HPP92_027597 Vanilla planifolia HOM05D000082 ORTHO05D007743 9.8e-24 114.4 198 40.9
AUR62038076 Chenopodium quinoa HOM05D000082 ORTHO05D007743 1.7e-23 113.6 182 44.0
Nn8g38527 Nelumbo nucifera HOM05D000082 ORTHO05D007743 4.8e-23 112.1 179 40.2
HPP92_002370 Vanilla planifolia HOM05D000082 ORTHO05D007743 1.8e-22 110.2 198 40.4
Sc25g0004450 Simmondsia chinensis HOM05D000082 ORTHO05D007743 4.1e-22 109.0 174 41.4
Peaxi162Scf00251g00411 Petunia axillaris HOM05D000082 ORTHO05D007743 7.0e-22 108.2 168 41.7
AUR62038171 Chenopodium quinoa HOM05D000082 ORTHO05D007743 1.6e-21 107.1 182 43.4
Os09g0434200 Oryza sativa ssp. japonica HOM05D000082 ORTHO05D007743 6.6e-20 101.7 233 31.3
A10p19130 Brassica napus HOM05D000082 ORTHO05D007743 1.5e-19 100.5 59 86.4
SEGI_35365 Sequoiadendron giganteum HOM05D000082 ORTHO05D007743 1.5e-19 100.5 197 34.5
BcaC04g19487 Brassica carinata HOM05D000082 ORTHO05D007743 1.9e-19 100.1 64 79.7
C09p55200 Brassica napus HOM05D000082 ORTHO05D007743 4.2e-19 99.0 59 84.7
Peaxi162Scf00251g00048 Petunia axillaris HOM05D000082 ORTHO05D007743 1.6e-18 97.1 125 45.6
FAN23G0804 Fragaria x ananassa HOM05D000082 ORTHO05D007743 1.8e-17 93.6 188 35.1
Aqoxy7G00970 Aquilegia oxysepala HOM05D000082 ORTHO05D007743 4.0e-17 92.4 186 32.8
BolC3t13657H Brassica oleracea HOM05D000278 ORTHO05D004673 1.7e-15 87.0 47 91.5
CDE06G2470 Ceratophyllum demersum HOM05D000082 ORTHO05D007743 2.2e-15 86.7 150 35.3
SMO011G0034 Selaginella moellendorffii HOM05D000082 ORTHO05D007743 1.6e-13 80.5 166 33.1
Mapoly0027s0101 Marchantia polymorpha HOM05D000082 ORTHO05D007743 5.9e-13 78.6 188 30.9
MELO3C016933.2 Cucumis melo HOM05D000082 ORTHO05D007743 1.0e-12 77.8 87 48.3
BraA09t37955Z Brassica rapa HOM05D000082 ORTHO05D007743 1.3e-12 77.4 113 48.7
AagrBONN_evm.TU.Sc2ySwM_344.4009 Anthoceros agrestis HOM05D000082 ORTHO05D007743 2.3e-09 66.6 196 30.1
MD08G1042800 Malus domestica HOM05D000082 ORTHO05D007743 4.0e-09 65.9 50 60.0
Pp3c1_42450 Physcomitrium patens HOM05D000082 ORTHO05D007743 4.4e-08 62.4 75 41.3
Dinv40947 Davidia involucrata HOM05D000082 ORTHO05D007743 7.5e-08 61.6 63 49.2
ATR0099G078 Amborella trichopoda HOM05D000082 ORTHO05D007743 9.8e-08 61.2 56 50.0
Pp3c2_5960 Physcomitrium patens HOM05D000082 ORTHO05D007743 1.9e-06 57.0 202 26.7
PSO421G0433 Papaver somniferum HOM05D000082 ORTHO05D007743 3.2e-06 56.2 51 60.8
PSO104G0089 Papaver somniferum HOM05D000082 ORTHO05D007743 9.2e-06 54.7 51 58.8


User provided reference genes

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