Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p12520 Brassica napus HOM05D001038 ORTHO05D032356 3.8e-157 558.1 286 100.0
BolC6t36405H Brassica oleracea HOM05D001038 ORTHO05D032356 6.1e-155 550.8 286 98.6
BcaC08g43867 Brassica carinata HOM05D001038 ORTHO05D032356 1.2e-115 420.2 258 87.2
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 9.0e-50 201.4 186 57.0
BcaC05g28246 Brassica carinata HOM05D001038 ORTHO05D031796 1.7e-48 197.2 186 57.0
C05p42760 Brassica napus HOM05D001038 ORTHO05D031796 2.2e-48 196.8 185 57.3
BolC2t07874H Brassica oleracea HOM05D001038 ORTHO05D010946 1.1e-44 184.5 185 53.0
BcaC06g33888 Brassica carinata HOM05D001038 ORTHO05D017617 1.5e-44 184.1 186 55.4
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-44 183.3 187 52.9
C06p26270 Brassica napus HOM05D001038 ORTHO05D017617 5.9e-41 172.2 184 51.1
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 3.3e-36 156.4 198 46.5
BcaB08g35558 Brassica carinata HOM05D001038 ORTHO05D000395 7.4e-36 155.2 183 50.3
C07p35880 Brassica napus HOM05D001038 ORTHO05D017617 6.3e-35 152.1 256 39.1
BolC5t33003H Brassica oleracea HOM05D001038 ORTHO05D031796 1.4e-29 134.4 138 53.6
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-27 127.5 186 40.9
BcaB07g31666 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-23 114.4 185 41.6
BcaC05g27501 Brassica carinata HOM05D001038 ORTHO05D032287 2.1e-22 110.5 109 56.0
BolC6t37789H Brassica oleracea HOM05D001038 ORTHO05D039878 6.1e-22 109.0 108 55.6
BcaC01g05566 Brassica carinata HOM05D023990 ORTHO05D032040 1.2e-17 94.7 191 34.6
BcaB07g32821 Brassica carinata HOM05D001038 ORTHO05D039878 5.9e-17 92.4 66 68.2
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 5.9e-17 92.4 71 66.2
C05p38680 Brassica napus HOM05D001038 ORTHO05D000395 2.2e-16 90.5 93 49.5
BolC5t32608H Brassica oleracea HOM05D001038 ORTHO05D000395 2.2e-16 90.5 93 49.5
BcaB07g33657 Brassica carinata HOM05D000428 ORTHO05D000582 4.2e-15 86.3 145 35.9
BcaB05g23741 Brassica carinata HOM05D000373 ORTHO05D000395 2.8e-14 83.6 195 35.9
C03p24850 Brassica napus HOM05D023990 ORTHO05D032040 4.7e-14 82.8 174 34.5
BolC3t14873H Brassica oleracea HOM05D023990 ORTHO05D032040 4.7e-14 82.8 174 34.5
BcaB01g02416 Brassica carinata HOM05D011654 ORTHO05D010946 8.0e-14 82.0 189 31.7
BcaB06g26967 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-13 80.9 70 62.9
BcaB06g27191 Brassica carinata HOM05D001038 ORTHO05D010946 3.0e-13 80.1 92 47.8
BcaB02g11035 Brassica carinata HOM05D001038 ORTHO05D000395 5.2e-13 79.3 196 32.7
BcaC06g32416 Brassica carinata HOM05D001038 ORTHO05D017617 8.8e-13 78.6 78 51.3
BcaC05g27866 Brassica carinata HOM05D001038 ORTHO05D000395 7.5e-12 75.5 55 63.6
C02p31700 Brassica napus HOM05D000311 ORTHO05D000183 1.7e-11 74.3 135 37.0
BcaB01g02361 Brassica carinata HOM05D001038 ORTHO05D010946 6.3e-11 72.4 122 39.3
BcaC09g49302 Brassica carinata HOM05D034069 ORTHO05D032851 6.3e-11 72.4 185 29.7
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-10 71.2 119 37.8
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 1.8e-10 70.9 140 35.0
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 5.4e-10 69.3 83 48.2
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 7.0e-10 68.9 68 48.5
C03p52320 Brassica napus HOM05D001038 ORTHO05D032864 9.2e-10 68.6 43 69.8
BcaB08g36238 Brassica carinata HOM05D011654 ORTHO05D010946 1.2e-09 68.2 90 42.2
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.2e-09 68.2 157 31.2
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 2.0e-09 67.4 120 40.0
BcaB06g27217 Brassica carinata HOM05D020314 ORTHO05D010946 3.5e-09 66.6 185 28.6
BcaB08g34843 Brassica carinata HOM05D001038 ORTHO05D010946 3.5e-09 66.6 141 34.0
BolC9t59719H Brassica oleracea HOM05D001038 ORTHO05D032864 4.5e-09 66.2 43 69.8
BcaC01g03929 Brassica carinata HOM05D001038 ORTHO05D010946 2.9e-08 63.5 137 35.0
BcaB04g17957 Brassica carinata HOM05D020314 ORTHO05D093315 3.8e-08 63.2 173 29.5
BcaC03g14544 Brassica carinata HOM05D001038 ORTHO05D010946 1.1e-07 61.6 138 34.1
BcaB08g34797 Brassica carinata HOM05D001038 ORTHO05D000395 7.3e-07 58.9 119 35.3
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 7.3e-07 58.9 60 51.7
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 9.5e-07 58.5 131 31.3
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 9.5e-07 58.5 131 31.3
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.1e-06 57.4 155 32.9
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 2.8e-06 57.0 105 35.2
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 8.0e-06 55.5 91 38.5


User provided reference genes

Program Settings