Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p09580 Brassica napus HOM05D000083 ORTHO05D001732 1.9e-37 158.7 79 100.0
A06p00760 Brassica napus HOM05D000083 ORTHO05D001732 8.7e-27 123.2 67 91.0
BraA06t23310Z Brassica rapa HOM05D000083 ORTHO05D001732 8.7e-27 123.2 67 91.0
BolC6t36032H Brassica oleracea HOM05D000083 ORTHO05D001732 5.1e-19 97.4 68 77.9
C06p09600 Brassica napus HOM05D000083 ORTHO05D001732 2.4e-16 88.6 61 78.7
C06p09590 Brassica napus HOM05D000083 ORTHO05D001732 1.2e-15 86.3 61 77.0
BolC3t15705H Brassica oleracea HOM05D000083 ORTHO05D001732 1.6e-12 75.9 58 70.7
BcaC01g04771 Brassica carinata HOM05D000083 ORTHO05D001732 6.0e-12 73.9 46 82.6
A03p28060 Brassica napus HOM05D000083 ORTHO05D001732 6.0e-12 73.9 46 82.6
C03p33920 Brassica napus HOM05D000083 ORTHO05D001732 6.0e-12 73.9 46 82.6
BraA03t12019Z Brassica rapa HOM05D000083 ORTHO05D001732 6.0e-12 73.9 46 82.6
Aa31LG1G10850 Aethionema arabicum HOM05D000083 ORTHO05D001732 8.7e-11 70.1 43 81.4
Thhalv10028523m.g Eutrema salsugineum HOM05D000083 ORTHO05D001732 1.1e-10 69.7 46 78.3
BcaB01g02860 Brassica carinata HOM05D000083 ORTHO05D001732 7.4e-10 67.0 42 83.3
BcaB06g26629 Brassica carinata HOM05D000083 ORTHO05D001732 1.1e-08 63.2 47 70.2
CARHR259530 Cardamine hirsuta HOM05D000083 ORTHO05D001732 1.1e-08 63.2 43 74.4
Sp6g09370 Schrenkiella parvula HOM05D000083 ORTHO05D001732 1.4e-08 62.8 47 72.3
AL6G42310 Arabidopsis lyrata HOM05D000083 ORTHO05D001732 1.8e-08 62.4 44 75.0
AT4G08500 Arabidopsis thaliana HOM05D000083 ORTHO05D001732 4.0e-08 61.2 44 72.7
BcaC04g20908 Brassica carinata HOM05D000083 ORTHO05D001732 4.0e-08 61.2 44 72.7
A09p30200 Brassica napus HOM05D000083 ORTHO05D001732 4.0e-08 61.2 44 72.7
C09p38090 Brassica napus HOM05D000083 ORTHO05D001732 4.0e-08 61.2 44 72.7
BolC9t56645H Brassica oleracea HOM05D000083 ORTHO05D001732 4.0e-08 61.2 44 72.7
BraA09t38584Z Brassica rapa HOM05D000083 ORTHO05D001732 4.0e-08 61.2 44 72.7
Carub.0006s2704 Capsella rubella HOM05D000083 ORTHO05D001732 4.0e-08 61.2 54 64.8
BcaB01g01347 Brassica carinata HOM05D000083 ORTHO05D001732 1.2e-07 59.7 47 68.1
BolC4t24655H Brassica oleracea HOM05D000083 ORTHO05D032390 2.6e-07 58.5 42 69.0
C03p37850 Brassica napus HOM05D000083 ORTHO05D001732 7.6e-07 57.0 49 61.2
BolC3t16074H Brassica oleracea HOM05D000083 ORTHO05D001732 7.6e-07 57.0 50 64.0
BcaB01g02458 Brassica carinata HOM05D000083 ORTHO05D001732 1.3e-06 56.2 46 65.2
CARHR253350 Cardamine hirsuta HOM05D000083 ORTHO05D001732 2.2e-06 55.5 71 53.5
AT4G12020 Arabidopsis thaliana HOM05D000005 ORTHO05D012037 2.9e-06 55.1 43 69.8
BcaC01g06757 Brassica carinata HOM05D000083 ORTHO05D001732 2.9e-06 55.1 50 62.0
AL6G42300 Arabidopsis lyrata HOM05D000083 ORTHO05D001732 4.9e-06 54.3 51 60.8
arahy.Tifrunner.gnm1.ann1.SQ16A9 Arachis hypogaea HOM05D000083 ORTHO05D001732 8.4e-06 53.5 71 50.7
arahy.Tifrunner.gnm1.ann1.XPKP8Y Arachis hypogaea HOM05D000083 ORTHO05D001732 8.4e-06 53.5 66 48.5


User provided reference genes

Program Settings