Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 5.8e-118 427.6 213 100.0
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 1.4e-103 379.8 291 70.8
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 1.4e-103 379.8 291 70.8
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 1.4e-103 379.8 291 70.8
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 5.3e-103 377.9 291 70.4
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 4.2e-100 368.2 291 68.7
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 5.6e-97 357.8 291 66.3
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 2.0e-94 349.4 291 65.6
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 5.8e-94 347.8 291 65.3
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 9.9e-94 347.1 291 64.3
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 1.7e-93 346.3 291 65.3
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 4.9e-93 344.7 291 66.0
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 9.3e-84 313.9 159 93.7
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 4.8e-80 301.6 291 56.7
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 1.2e-78 297.0 291 57.4
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 8.7e-74 280.8 291 54.3
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 1.5e-73 280.0 291 53.3
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 9.7e-73 277.3 291 51.9
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 3.7e-72 275.4 292 53.1
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 3.7e-72 275.4 291 53.3
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 3.7e-72 275.4 291 52.9
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 8.2e-72 274.2 292 51.7
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 3.1e-71 272.3 292 53.1
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 9.0e-71 270.8 259 54.8
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 1.5e-70 270.0 292 51.7
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 1.5e-70 270.0 291 51.5
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 2.6e-70 269.2 291 51.9
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 3.4e-70 268.9 259 54.4
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 3.4e-70 268.9 291 51.2
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 3.4e-70 268.9 291 50.5
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 4.5e-70 268.5 292 52.7
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 4.5e-70 268.5 291 50.5
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 7.7e-70 267.7 291 52.9
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 1.0e-69 267.3 292 52.4
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 2.9e-69 265.8 291 50.5
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 2.9e-69 265.8 291 51.5
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 3.8e-69 265.4 291 51.9
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 6.5e-69 264.6 291 50.5
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.1e-68 263.8 291 50.2
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 1.1e-68 263.8 291 51.2
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 1.4e-68 263.5 292 52.1
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 1.4e-68 263.5 178 71.9
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.9e-68 263.1 291 51.5
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 1.9e-68 263.1 178 70.8
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 2.5e-68 262.7 178 70.8
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 2.5e-68 262.7 291 50.2
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 3.2e-68 262.3 178 71.3
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 3.2e-68 262.3 291 51.2
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 3.2e-68 262.3 291 51.5
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 3.2e-68 262.3 291 51.2
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 4.2e-68 261.9 291 50.2
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 4.2e-68 261.9 291 50.2
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 5.5e-68 261.5 291 50.5
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 7.2e-68 261.2 291 50.5
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 7.2e-68 261.2 291 50.5
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 9.4e-68 260.8 293 50.9
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.2e-67 260.4 291 51.2
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 1.2e-67 260.4 289 49.5
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 2.7e-67 259.2 292 50.3
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 6.1e-67 258.1 292 50.3
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 7.9e-67 257.7 291 49.5
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 7.9e-67 257.7 291 49.8
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 7.9e-67 257.7 291 50.9
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 7.9e-67 257.7 291 50.9
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 7.9e-67 257.7 291 50.9
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 3.0e-66 255.8 291 50.2
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 6.7e-66 254.6 293 49.1
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 6.7e-66 254.6 291 49.8
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 6.7e-66 254.6 158 78.5
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 1.5e-65 253.4 253 54.5
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 1.5e-65 253.4 160 76.2
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 2.0e-65 253.1 178 69.7
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 2.5e-65 252.7 292 49.0
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 2.5e-65 252.7 179 69.3
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 3.3e-65 252.3 179 68.7
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 3.3e-65 252.3 179 68.7
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 3.3e-65 252.3 292 49.7
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 4.3e-65 251.9 287 49.8
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 1.3e-64 250.4 179 69.3
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 1.7e-64 250.0 179 69.8
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 1.7e-64 250.0 290 47.9
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.7e-64 250.0 179 68.2
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 3.7e-64 248.8 291 47.1
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.7e-64 248.8 314 46.5
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 3.7e-64 248.8 291 46.7
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 4.8e-64 248.4 178 68.0
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.4e-63 246.9 257 50.2
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.4e-63 246.9 178 66.9
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 4.1e-63 245.4 257 51.4
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.2e-62 243.8 293 48.5
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 5.9e-62 241.5 290 48.6
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 7.7e-62 241.1 290 48.6
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 7.7e-62 241.1 290 48.6
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 7.7e-62 241.1 291 45.0
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.2e-61 239.6 290 48.6
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 1.1e-60 237.3 293 46.4
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 7.2e-60 234.6 293 46.1
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.2e-59 233.8 291 44.3
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 3.6e-59 232.3 289 47.1
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 3.6e-59 232.3 289 47.1
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 7.9e-59 231.1 272 49.6
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 3.0e-58 229.2 179 64.2
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 1.5e-57 226.9 296 45.6
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 3.3e-57 225.7 251 48.6
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 1.3e-56 223.8 291 45.7
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 2.8e-56 222.6 178 61.2
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 4.8e-56 221.9 293 44.4
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 7.0e-55 218.0 164 63.4
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 9.1e-55 217.6 163 63.2
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 3.5e-54 215.7 178 57.3
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 7.7e-54 214.5 134 75.4
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 3.6e-51 205.7 162 60.5
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 1.3e-48 197.2 184 52.7
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 1.4e-47 193.7 128 72.7
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.6e-46 190.3 184 51.6
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 8.5e-45 184.5 178 54.5
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 8.5e-37 157.9 290 36.2
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 9.8e-33 144.4 182 41.2
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 4.1e-31 139.0 101 60.4
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 5.4e-31 138.7 295 36.3
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 4.7e-19 99.0 183 39.9


User provided reference genes

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