Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 1.7e-174 615.9 309 100.0
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 1.1e-170 603.2 311 97.7
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 2.7e-169 598.6 309 96.1
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 1.8e-168 595.9 309 96.1
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 2.8e-153 545.4 310 88.4
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 6.8e-152 540.8 308 88.0
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 4.9e-150 534.6 311 87.8
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 1.3e-147 526.6 306 84.6
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 6.6e-147 524.2 309 87.1
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 5.6e-138 494.6 307 78.2
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 1.1e-122 443.7 304 70.7
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 2.5e-122 442.6 301 71.8
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 7.3e-122 441.0 310 69.7
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 7.3e-122 441.0 304 70.7
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 9.6e-122 440.7 309 69.9
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 2.8e-121 439.1 311 69.1
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 3.6e-121 438.7 308 70.8
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 6.2e-121 438.0 308 69.2
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 6.2e-121 438.0 313 70.0
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 8.1e-121 437.6 308 70.1
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 1.1e-120 437.2 309 69.3
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 1.8e-120 436.4 299 71.6
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 3.1e-120 435.6 296 70.3
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 5.3e-120 434.9 298 70.8
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 5.3e-120 434.9 305 67.9
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 6.9e-120 434.5 301 70.1
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 9.0e-120 434.1 300 70.0
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 1.2e-119 433.7 298 70.8
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.5e-119 433.3 300 70.0
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 1.5e-119 433.3 313 69.0
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 2.6e-119 432.6 312 68.6
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 4.4e-119 431.8 306 68.0
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 5.8e-119 431.4 311 67.8
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 5.8e-119 431.4 306 67.6
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 5.8e-119 431.4 296 70.3
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 7.6e-119 431.0 305 67.2
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 1.3e-118 430.3 309 68.6
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 2.2e-118 429.5 305 67.2
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 1.4e-117 426.8 299 69.6
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 2.4e-117 426.0 308 67.5
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 3.2e-117 425.6 299 68.2
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 4.2e-117 425.2 296 69.6
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 7.1e-117 424.5 310 68.7
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 9.3e-117 424.1 306 68.3
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 1.2e-116 423.7 303 68.6
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 2.1e-116 422.9 296 69.6
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 2.1e-116 422.9 308 65.6
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 3.5e-116 422.2 310 67.4
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 1.0e-115 420.6 307 67.4
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 2.3e-115 419.5 311 66.6
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 3.0e-115 419.1 305 66.2
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 8.7e-115 417.5 306 68.0
AL3G15170 Arabidopsis lyrata HOM05D005899 ORTHO05D007445 1.1e-114 417.2 230 88.7
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 1.1e-114 417.2 309 68.0
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 1.5e-114 416.8 305 67.5
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 1.9e-114 416.4 305 66.9
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 1.9e-114 416.4 309 66.7
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 1.9e-114 416.4 319 66.5
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 7.3e-114 414.5 309 68.0
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 2.1e-113 412.9 304 68.4
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.4e-112 409.5 304 66.1
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 2.0e-111 406.4 295 65.4
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 2.6e-111 406.0 298 68.5
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 3.4e-111 405.6 312 65.4
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 6.4e-110 401.4 302 65.6
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 1.2e-108 397.1 297 65.0
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 1.6e-108 396.7 306 64.7
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 1.6e-108 396.7 295 67.1
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 4.6e-108 395.2 300 65.0
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 4.6e-108 395.2 299 66.9
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 2.3e-107 392.9 312 61.9
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 3.0e-107 392.5 308 62.3
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 8.7e-107 391.0 306 63.4
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 1.5e-106 390.2 297 64.6
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 1.9e-106 389.8 306 63.4
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 9.6e-106 387.5 307 62.9
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 1.4e-104 383.6 302 62.6
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 2.4e-104 382.9 305 64.3
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 1.7e-102 376.7 311 62.1
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 6.5e-102 374.8 296 61.5
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 2.7e-100 369.4 305 61.0
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.8e-99 366.7 306 62.7
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 6.5e-94 348.2 296 56.8
TPR.G8897 Trifolium pratense HOM05D005899 ORTHO05D007445 1.3e-91 340.5 253 65.2
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 6.7e-91 338.2 175 100.0
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 1.1e-90 337.4 309 58.6
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 1.6e-89 333.6 310 57.1
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 6.3e-89 331.6 239 66.1
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 4.2e-85 318.9 243 65.0
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 5.5e-85 318.5 241 65.6
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 7.4e-82 308.1 417 41.7
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.7e-81 307.0 311 53.4
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 3.8e-78 295.8 274 55.8
Eucgr.L02186 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.7e-76 289.7 312 50.0
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.9e-75 285.8 306 51.3
Peaxi162Scf00404g00009 Petunia axillaris HOM05D005899 ORTHO05D007445 4.4e-74 282.3 202 67.3
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 7.4e-74 281.6 239 61.1
Eucgr.L02099 Eucalyptus grandis HOM05D005899 ORTHO05D007445 1.0e-70 271.2 202 65.3
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 4.7e-68 262.3 210 61.9
Carub.0003s0407 Capsella rubella HOM05D005899 ORTHO05D007445 8.0e-68 261.5 149 84.6
Ah.04g162380 Amaranthus hybridus HOM05D005899 ORTHO05D007445 3.3e-66 256.1 166 71.1
Nitab4.5_0013433g0050 Nicotiana tabacum HOM05D005899 ORTHO05D007445 2.2e-65 253.4 189 63.0
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 4.2e-61 239.2 306 45.8
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.7e-57 227.3 256 49.6
Dinv12477 Davidia involucrata HOM05D005899 ORTHO05D007445 2.7e-55 219.9 139 75.5
Sabra15G0056900 Salix brachista HOM05D005899 ORTHO05D007445 1.4e-51 207.6 141 69.5
Sabra15G0057000 Salix brachista HOM05D005899 ORTHO05D007445 1.4e-51 207.6 141 69.5
Sabra15G0068600 Salix brachista HOM05D005899 ORTHO05D007445 1.4e-51 207.6 141 69.5
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 2.6e-50 203.4 162 65.4
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 2.2e-49 200.3 190 55.3
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 7.0e-48 195.3 162 58.6
FAN05G4786 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.7e-46 190.7 102 84.3
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 8.0e-44 181.8 169 58.6
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 6.8e-43 178.7 108 88.0
SGA_v2.0_scaffold31G12627 Striga asiatica HOM05D005899 ORTHO05D007445 2.6e-42 176.8 127 63.8
Cfa006462 Carpinus fangiana HOM05D005899 ORTHO05D007445 2.4e-40 170.2 122 65.6
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 1.2e-36 157.9 117 70.9
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 6.8e-35 152.1 118 66.9
TAR140G0002 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.4e-24 117.1 106 57.5
TAR623G1042 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.4e-24 117.1 106 57.5
TAR375G0990 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.3e-22 110.5 107 56.1
TAR636G1090 Trochodendron aralioides HOM05D005899 ORTHO05D007445 3.9e-22 109.8 106 54.7
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.2e-20 104.8 93 57.0
RcHm_v2.0_Chr7g0217791 Rosa chinensis HOM05D005899 ORTHO05D007445 6.2e-20 102.4 151 39.7
PRCOL_00001982 Prasinoderma coloniale HOM05D005899 ORTHO05D007445 8.1e-20 102.1 150 40.0
TAR625G0400 Trochodendron aralioides HOM05D005899 ORTHO05D007445 8.9e-19 98.6 91 54.9
unitig_21.g20175 Utricularia gibba HOM05D005899 ORTHO05D007445 2.6e-18 97.1 71 67.6
TAR375G0306 Trochodendron aralioides HOM05D005899 ORTHO05D007445 5.2e-11 72.8 44 81.8
TAR365G0745 Trochodendron aralioides HOM05D005899 ORTHO05D007445 4.4e-10 69.7 61 57.4
FvH4_7g17710 Fragaria vesca HOM05D005899 ORTHO05D045384 1.3e-06 58.2 58 46.6
FAN06G4129 Fragaria x ananassa HOM05D005899 ORTHO05D045384 3.0e-06 57.0 68 41.2


User provided reference genes

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