Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p57700 Brassica napus HOM05D001807 ORTHO05D042163 1.2e-104 383.3 199 100.0
A05p38740 Brassica napus HOM05D001807 ORTHO05D002044 3.5e-32 142.5 158 60.1
BraA05t22665Z Brassica rapa HOM05D001807 ORTHO05D002044 4.5e-32 142.1 158 60.1
Thhalv10020197m.g Eutrema salsugineum HOM05D001807 ORTHO05D002044 6.5e-31 138.3 159 56.6
AT3G10420 Arabidopsis thaliana HOM05D001807 ORTHO05D002044 7.2e-30 134.8 159 57.2
Sp3g08700 Schrenkiella parvula HOM05D001807 ORTHO05D002044 7.2e-30 134.8 158 56.3
AL3G21790 Arabidopsis lyrata HOM05D001807 ORTHO05D002044 3.6e-29 132.5 161 55.9
BcaB04g21212 Brassica carinata HOM05D001807 ORTHO05D002044 2.3e-28 129.8 158 55.7
Carub.0003s0961 Capsella rubella HOM05D001807 ORTHO05D002044 5.2e-28 128.6 161 55.9
CARHR084910 Cardamine hirsuta HOM05D001807 ORTHO05D002044 1.2e-27 127.5 153 58.8
Aa31LG3G3030 Aethionema arabicum HOM05D001807 ORTHO05D002044 1.3e-23 114.0 163 50.3
BolC1t05402H Brassica oleracea HOM05D001807 ORTHO05D042163 6.8e-20 101.7 71 80.3
THA.LOC104823203 Tarenaya hassleriana HOM05D001807 ORTHO05D002044 7.0e-17 91.7 149 44.3
MD07G1168300 Malus domestica HOM05D001807 ORTHO05D002044 1.7e-10 70.5 157 37.6
C05p57750 Brassica napus HOM05D001807 ORTHO05D002044 3.7e-10 69.3 159 40.3
BolC5t34432H Brassica oleracea HOM05D001807 ORTHO05D002044 3.7e-10 69.3 159 40.3
BcaC05g29469 Brassica carinata HOM05D001807 ORTHO05D002044 6.4e-10 68.6 160 40.0
FvH4_7g18530 Fragaria vesca HOM05D001807 ORTHO05D002044 2.4e-09 66.6 144 38.2
RcHm_v2.0_Chr1g0362311 Rosa chinensis HOM05D001807 ORTHO05D002044 3.2e-09 66.2 150 36.0
Nn6g35251 Nelumbo nucifera HOM05D001807 ORTHO05D002044 4.1e-09 65.9 170 35.9
QL08p053655 Quercus lobata HOM05D001807 ORTHO05D002044 5.4e-09 65.5 148 37.2
FAN06G1750 Fragaria x ananassa HOM05D001807 ORTHO05D002044 1.2e-08 64.3 168 36.3
MD01G1101700 Malus domestica HOM05D001807 ORTHO05D002044 1.2e-08 64.3 155 36.8
Potri.010G228600 Populus trichocarpa HOM05D001807 ORTHO05D002044 1.6e-08 63.9 153 34.6
Actinidia34799 Actinidia chinensis HOM05D001807 ORTHO05D002044 2.7e-08 63.2 168 33.3
QL03p058546 Quercus lobata HOM05D001807 ORTHO05D002044 2.7e-08 63.2 150 36.7
Actinidia38877 Actinidia chinensis HOM05D001807 ORTHO05D002044 3.5e-08 62.8 171 33.9
FAN10G3933 Fragaria x ananassa HOM05D001807 ORTHO05D002044 3.5e-08 62.8 168 35.7
Ciclev10030851m.g Citrus clementina HOM05D001807 ORTHO05D002044 4.6e-08 62.4 158 38.0
CAN.G321.50 Capsicum annuum HOM05D001807 ORTHO05D002044 6.0e-08 62.0 161 32.3
Eucgr.J01045 Eucalyptus grandis HOM05D001807 ORTHO05D002044 6.0e-08 62.0 157 35.7
FAN01G1128 Fragaria x ananassa HOM05D001807 ORTHO05D002044 6.0e-08 62.0 144 35.4
Haze_16749 Corylus avellana HOM05D001807 ORTHO05D002044 7.8e-08 61.6 151 36.4
FAN03G3235 Fragaria x ananassa HOM05D001807 ORTHO05D002044 7.8e-08 61.6 144 36.8
C09p61620 Brassica napus HOM05D001807 ORTHO05D002044 1.7e-07 60.5 30 93.3
BolC9t59000H Brassica oleracea HOM05D001807 ORTHO05D002044 1.7e-07 60.5 30 93.3
Manes.07G094300 Manihot esculenta HOM05D001807 ORTHO05D002044 2.3e-07 60.1 158 35.4
Prupe.2G206900 Prunus persica HOM05D001807 ORTHO05D002044 3.0e-07 59.7 157 35.7
Sabra10G0177300 Salix brachista HOM05D001807 ORTHO05D002044 3.0e-07 59.7 152 36.8
Cpa.g.sc53.144 Carica papaya HOM05D001807 ORTHO05D002044 5.0e-07 58.9 148 35.8
CiPaw.01G267600 Carya illinoinensis HOM05D001807 ORTHO05D002044 1.1e-06 57.8 153 34.0
Lsat_1_v5_gn_9_69640 Lactuca sativa HOM05D001807 ORTHO05D002044 1.5e-06 57.4 159 30.8
Aqoxy1G01126 Aquilegia oxysepala HOM05D001807 ORTHO05D002044 3.3e-06 56.2 144 34.7
Cfa001802 Carpinus fangiana HOM05D001807 ORTHO05D002044 4.3e-06 55.8 150 34.7
TAR633G0552 Trochodendron aralioides HOM05D001807 ORTHO05D002044 4.3e-06 55.8 159 35.2
arahy.Tifrunner.gnm1.ann1.7Y3RHD Arachis hypogaea HOM05D001807 ORTHO05D002044 5.6e-06 55.5 160 36.2
CANSAT56G2515 Cannabis sativa HOM05D001807 ORTHO05D002044 5.6e-06 55.5 146 32.2
TAR636G3645 Trochodendron aralioides HOM05D001807 ORTHO05D002044 5.6e-06 55.5 155 33.5


User provided reference genes

Program Settings