Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g29209 Brassica carinata HOM05D004814 ORTHO05D005778 7.5e-104 380.6 197 100.0
C05p54820 Brassica napus HOM05D004814 ORTHO05D005778 7.5e-104 380.6 197 100.0
BolC5t34154H Brassica oleracea HOM05D004814 ORTHO05D005778 1.8e-102 375.9 197 99.0
Sp3g11290 Schrenkiella parvula HOM05D004814 ORTHO05D005778 8.0e-98 360.5 197 95.4
BraA05t22442Z Brassica rapa HOM05D004814 ORTHO05D005778 1.2e-96 356.7 197 94.4
A05p36420 Brassica napus HOM05D004814 ORTHO05D005778 1.9e-94 349.4 197 92.9
BcaB06g25486 Brassica carinata HOM05D004814 ORTHO05D005778 1.7e-92 342.8 197 93.4
BraA03t12957Z Brassica rapa HOM05D004814 ORTHO05D005778 3.4e-88 328.6 202 87.1
A03p38040 Brassica napus HOM05D004814 ORTHO05D005778 4.4e-88 328.2 198 88.4
C03p46130 Brassica napus HOM05D004814 ORTHO05D005778 1.3e-87 326.6 198 89.9
BcaC01g04010 Brassica carinata HOM05D004814 ORTHO05D005778 1.7e-87 326.2 198 89.4
BolC3t16886H Brassica oleracea HOM05D004814 ORTHO05D005778 1.7e-87 326.2 198 89.4
BcaNung05270 Brassica carinata HOM05D004814 ORTHO05D005778 1.9e-86 322.8 198 87.9
A01p40420 Brassica napus HOM05D004814 ORTHO05D005778 9.2e-86 320.5 201 89.6
BraA01t04077Z Brassica rapa HOM05D004814 ORTHO05D005778 9.2e-86 320.5 201 89.6
Thhalv10021566m.g Eutrema salsugineum HOM05D004814 ORTHO05D005778 1.7e-84 316.2 200 86.5
Aa31LG8G330 Aethionema arabicum HOM05D004814 ORTHO05D005778 2.3e-81 305.8 200 85.0
AT3G13120 Arabidopsis thaliana HOM05D004814 ORTHO05D005778 3.1e-81 305.4 200 85.0
AL3G24860 Arabidopsis lyrata HOM05D004814 ORTHO05D005778 1.5e-80 303.1 200 85.0
Carub.0003s1246 Capsella rubella HOM05D004814 ORTHO05D005778 6.6e-76 287.7 200 81.5
CARHR087710 Cardamine hirsuta HOM05D004814 ORTHO05D005778 1.9e-75 286.2 201 81.6
Aa31LG10G250 Aethionema arabicum HOM05D004814 ORTHO05D005778 2.5e-75 285.8 200 82.5
THA.LOC104822735 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 5.2e-73 278.1 200 78.5
THA.LOC104815700 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 1.2e-72 276.9 201 78.6
THA.LOC104810287 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 1.3e-68 263.5 201 77.1
Manes.15G061900 Manihot esculenta HOM05D004814 ORTHO05D005778 5.3e-65 251.5 219 66.2
A01p40680 Brassica napus HOM05D004814 ORTHO05D005778 1.5e-64 250.0 199 73.4
C01p51960 Brassica napus HOM05D004814 ORTHO05D005778 5.8e-64 248.1 179 76.5
Atru.chr2.3664 Acer truncatum HOM05D004814 ORTHO05D005778 2.2e-63 246.1 197 71.6
CANSAT11G0174 Cannabis sativa HOM05D004814 ORTHO05D005778 2.2e-63 246.1 206 70.9
Manes.03G139872 Manihot esculenta HOM05D004814 ORTHO05D005778 2.2e-63 246.1 217 66.8
QL08p004842 Quercus lobata HOM05D004814 ORTHO05D005778 2.7e-61 239.2 212 67.0
DCAR_013223 Daucus carota HOM05D004814 ORTHO05D005778 3.5e-61 238.8 197 68.5
TWI38G0785 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 4.6e-61 238.4 208 66.8
TWI39G1010 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 7.8e-61 237.7 208 67.3
Potri.001G365600 Populus trichocarpa HOM05D004814 ORTHO05D005778 1.3e-60 236.9 162 77.8
Potri.011G092800 Populus trichocarpa HOM05D004814 ORTHO05D005778 1.7e-60 236.5 211 65.9
CiPaw.12G136400 Carya illinoinensis HOM05D004814 ORTHO05D005778 6.6e-60 234.6 211 66.8
MELO3C024899.2 Cucumis melo HOM05D004814 ORTHO05D005778 6.6e-60 234.6 211 64.5
Gorai.007G310400 Gossypium raimondii HOM05D004814 ORTHO05D005778 6.6e-60 234.6 197 69.0
RcHm_v2.0_Chr5g0054381 Rosa chinensis HOM05D004814 ORTHO05D005778 6.6e-60 234.6 204 65.7
Thecc.07G016800 Theobroma cacao HOM05D004814 ORTHO05D005778 6.6e-60 234.6 197 68.5
GSVIVG01014640001 Vitis vinifera HOM05D004814 ORTHO05D005778 6.6e-60 234.6 207 67.6
ClCG09G021040 Citrullus lanatus HOM05D004814 ORTHO05D005778 8.7e-60 234.2 213 64.3
EL10Ac4g07605 Beta vulgaris HOM05D004814 ORTHO05D005778 1.1e-59 233.8 199 68.3
Gohir.D11G287000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 1.1e-59 233.8 197 69.0
CSS0025876 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 1.9e-59 233.0 208 69.7
CsaV3_7G018640 Cucumis sativus L. HOM05D004814 ORTHO05D005778 1.9e-59 233.0 212 63.7
FAN16G2593 Fragaria x ananassa HOM05D004814 ORTHO05D005778 2.5e-59 232.6 204 66.7
MD03G1187000 Malus domestica HOM05D004814 ORTHO05D005778 2.5e-59 232.6 204 67.6
Ciclev10009615m.g Citrus clementina HOM05D004814 ORTHO05D005778 3.3e-59 232.3 197 66.5
Gohir.A11G276900 Gossypium hirsutum HOM05D004814 ORTHO05D005778 3.3e-59 232.3 199 68.3
CAN.G492.31 Capsicum annuum HOM05D004814 ORTHO05D005778 5.6e-59 231.5 201 68.2
Cfa020215 Carpinus fangiana HOM05D004814 ORTHO05D005778 5.6e-59 231.5 214 66.4
Sabra16G0239200 Salix brachista HOM05D004814 ORTHO05D005778 7.3e-59 231.1 215 64.2
FvH4_3g29500 Fragaria vesca HOM05D004814 ORTHO05D005778 9.6e-59 230.7 204 66.7
FAN11G3417 Fragaria x ananassa HOM05D004814 ORTHO05D005778 9.6e-59 230.7 204 66.7
FAN25G3790 Fragaria x ananassa HOM05D004814 ORTHO05D005778 9.6e-59 230.7 203 67.0
Dinv40842 Davidia involucrata HOM05D004814 ORTHO05D005778 1.3e-58 230.3 206 68.0
FAN21G1289 Fragaria x ananassa HOM05D004814 ORTHO05D005778 1.3e-58 230.3 204 66.7
Gohir.A01G090000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 1.3e-58 230.3 199 69.3
Dinv10318 Davidia involucrata HOM05D004814 ORTHO05D005778 1.6e-58 229.9 205 67.3
Gohir.D01G075300 Gossypium hirsutum HOM05D004814 ORTHO05D005778 1.6e-58 229.9 199 68.8
Gorai.002G098500 Gossypium raimondii HOM05D004814 ORTHO05D005778 1.6e-58 229.9 199 68.8
Nitab4.5_0006756g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 1.6e-58 229.9 196 67.9
vmacro22713 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 1.6e-58 229.9 208 65.4
Sabra11G0087000 Salix brachista HOM05D004814 ORTHO05D005778 2.1e-58 229.6 211 64.5
Duzib213G0234 Durio zibethinus HOM05D004814 ORTHO05D005778 3.6e-58 228.8 197 67.0
Haze_09803 Corylus avellana HOM05D004814 ORTHO05D005778 4.8e-58 228.4 197 68.5
Ah.06g181280 Amaranthus hybridus HOM05D004814 ORTHO05D005778 8.1e-58 227.6 197 67.5
MSTRG.14478 Avicennia marina HOM05D004814 ORTHO05D005778 8.1e-58 227.6 197 65.5
AUR62017069 Chenopodium quinoa HOM05D004814 ORTHO05D005778 8.1e-58 227.6 202 65.3
Actinidia30418 Actinidia chinensis HOM05D004814 ORTHO05D005778 1.1e-57 227.3 206 67.5
AUR62036421 Chenopodium quinoa HOM05D004814 ORTHO05D005778 1.1e-57 227.3 202 65.3
AUR62036427 Chenopodium quinoa HOM05D004814 ORTHO05D005778 1.1e-57 227.3 202 65.3
AUR62040646 Chenopodium quinoa HOM05D004814 ORTHO05D005778 1.1e-57 227.3 202 65.3
Nitab4.5_0003491g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 1.8e-57 226.5 198 66.2
Oeu049351.1 Olea europaea HOM05D004814 ORTHO05D005778 1.8e-57 226.5 202 66.3
arahy.Tifrunner.gnm1.ann1.0CA1AM Arachis hypogaea HOM05D004814 ORTHO05D005778 2.4e-57 226.1 212 63.7
HanXRQChr03g0061321 Helianthus annuus HOM05D004814 ORTHO05D005778 2.4e-57 226.1 196 64.8
PGSC0003DMG400014378 Solanum tuberosum HOM05D004814 ORTHO05D005778 2.4e-57 226.1 196 65.8
arahy.Tifrunner.gnm1.ann1.X98J9H Arachis hypogaea HOM05D004814 ORTHO05D005778 3.1e-57 225.7 211 64.5
Sc16g0007970 Simmondsia chinensis HOM05D004814 ORTHO05D005778 3.1e-57 225.7 200 65.5
Sed0017349 Sechium edule HOM05D004814 ORTHO05D005778 4.0e-57 225.3 214 63.1
arahy.Tifrunner.gnm1.ann1.CWZH2K Arachis hypogaea HOM05D004814 ORTHO05D005778 5.3e-57 224.9 212 63.7
Glyma.18G079900 Glycine max HOM05D004814 ORTHO05D005778 5.3e-57 224.9 214 66.4
COL.COLO4_09806 Corchorus olitorius HOM05D004814 ORTHO05D005778 6.9e-57 224.6 197 64.0
Lalb_Chr05g0211691 Lupinus albus HOM05D004814 ORTHO05D005778 6.9e-57 224.6 212 63.2
Sopen10g001990 Solanum pennellii HOM05D004814 ORTHO05D005778 1.2e-56 223.8 196 64.3
arahy.Tifrunner.gnm1.ann1.RG8M6K Arachis hypogaea HOM05D004814 ORTHO05D005778 2.0e-56 223.0 212 63.7
Glyma.08G327500 Glycine max HOM05D004814 ORTHO05D005778 3.4e-56 222.2 212 64.6
Hma1.2p1_0889F.1_g232870 Hydrangea macrophylla HOM05D004814 ORTHO05D005778 5.8e-56 221.5 216 61.1
MD11G1202000 Malus domestica HOM05D004814 ORTHO05D005778 5.8e-56 221.5 204 62.7
Solyc10g006030.3 Solanum lycopersicum HOM05D004814 ORTHO05D005778 5.8e-56 221.5 194 65.5
TAR626G1431 Trochodendron aralioides HOM05D004814 ORTHO05D005778 5.8e-56 221.5 213 63.8
Oeu057089.1 Olea europaea HOM05D004814 ORTHO05D005778 7.6e-56 221.1 197 63.5
PGR031G1774 Punica granatum HOM05D004814 ORTHO05D005778 7.6e-56 221.1 198 65.2
Ah.04g166490 Amaranthus hybridus HOM05D004814 ORTHO05D005778 9.9e-56 220.7 198 65.7
Lsat_1_v5_gn_9_90400 Lactuca sativa HOM05D004814 ORTHO05D005778 9.9e-56 220.7 197 65.0
Nn1g03216 Nelumbo nucifera HOM05D004814 ORTHO05D005778 9.9e-56 220.7 212 62.3
Ca_20138_v3 Cicer arietinum L. HOM05D004814 ORTHO05D005778 1.3e-55 220.3 209 64.1
Cc05_g14790 Coffea canephora HOM05D004814 ORTHO05D005778 1.3e-55 220.3 197 62.9
Peaxi162Scf00900g00010 Petunia axillaris HOM05D004814 ORTHO05D005778 2.2e-55 219.5 171 70.8
Actinidia05019 Actinidia chinensis HOM05D004814 ORTHO05D005778 3.8e-55 218.8 206 65.5
PSO541G0969 Papaver somniferum HOM05D004814 ORTHO05D005778 3.8e-55 218.8 213 63.4
PSO675G8482 Papaver somniferum HOM05D004814 ORTHO05D005778 4.9e-55 218.4 213 62.9
ECA240G4731 Erigeron canadensis HOM05D001580 ORTHO05D001517 6.4e-55 218.0 139 79.9
Prupe.4G239600 Prunus persica HOM05D004814 ORTHO05D005778 8.4e-55 217.6 204 63.7
Hund01909 Selenicereus undatus HOM05D004814 ORTHO05D005778 1.1e-54 217.2 198 66.2
TAR629G3287 Trochodendron aralioides HOM05D004814 ORTHO05D005778 1.9e-54 216.5 211 64.0
Eucgr.F03697 Eucalyptus grandis HOM05D004814 ORTHO05D005778 3.2e-54 215.7 198 62.6
Rhsim06G0227300 Rhododendron simsii HOM05D004814 ORTHO05D005778 7.1e-54 214.5 207 62.3
TPR.G30737 Trifolium pratense HOM05D004814 ORTHO05D005778 1.2e-53 213.8 205 62.9
Phvul.001G030600 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 1.6e-53 213.4 213 62.0
Psat5g170120 Pisum sativum HOM05D004814 ORTHO05D005778 2.7e-53 212.6 199 60.3
Aqoxy4G02247 Aquilegia oxysepala HOM05D004814 ORTHO05D005778 3.5e-53 212.2 207 61.4
Cpa.g.sc12.175 Carica papaya HOM05D004814 ORTHO05D005778 3.5e-53 212.2 104 98.1
Phvul.006G055300 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 4.6e-53 211.8 213 61.0
CSS0019029 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 7.9e-53 211.1 112 92.0
HanXRQChr13g0408121 Helianthus annuus HOM05D004814 ORTHO05D005778 7.9e-53 211.1 198 64.1
Medtr3g058430 Medicago truncatula HOM05D004814 ORTHO05D005778 1.3e-52 210.3 202 60.9
Lj1P888T30 Lonicera japonica HOM05D004814 ORTHO05D005778 1.8e-52 209.9 104 97.1
VMungo0248G0001 Vigna mungo HOM05D004814 ORTHO05D005778 3.0e-52 209.1 104 96.2
Zm00001eb401060 Zea mays HOM05D004814 ORTHO05D005778 3.0e-52 209.1 159 67.9
unitig_62.g23297 Utricularia gibba HOM05D004814 ORTHO05D005778 5.1e-52 208.4 185 65.9
BraA01t04102Z Brassica rapa HOM05D004814 ORTHO05D005778 8.7e-52 207.6 104 97.1
CDE10G1086 Ceratophyllum demersum HOM05D004814 ORTHO05D005778 8.7e-52 207.6 111 89.2
ATR0624G087 Amborella trichopoda HOM05D004814 ORTHO05D005778 1.5e-51 206.8 104 95.2
HPP92_020399 Vanilla planifolia HOM05D004814 ORTHO05D005778 3.3e-51 205.7 197 64.0
Zm00001eb008100 Zea mays HOM05D004814 ORTHO05D005778 7.4e-51 204.5 188 61.7
Os03g0196800 Oryza sativa ssp. japonica HOM05D004814 ORTHO05D005778 9.6e-51 204.1 183 61.2
SGA_v2.0_scaffold8G04398 Striga asiatica HOM05D004814 ORTHO05D005778 9.6e-51 204.1 197 59.4
Actinidia05024 Actinidia chinensis HOM05D004814 ORTHO05D005778 3.7e-50 202.2 201 62.2
QL05p065674 Quercus lobata HOM05D004814 ORTHO05D005778 2.4e-49 199.5 110 90.0
QL05p065593 Quercus lobata HOM05D004814 ORTHO05D005778 1.1e-46 190.7 103 92.2
MBI19_g45743_MAGBIO Magnolia biondii HOM05D004814 ORTHO05D005778 1.9e-46 189.9 100 89.0
PSO832G2117 Papaver somniferum HOM05D004814 ORTHO05D005778 1.5e-43 180.3 210 54.3
AagrBONN_evm.TU.Sc2ySwM_117.1321 Anthoceros agrestis HOM05D004814 ORTHO05D005778 3.3e-43 179.1 104 80.8
Pp3c24_19230 Physcomitrium patens HOM05D004814 ORTHO05D005778 5.7e-43 178.3 129 69.0
Pp3c8_18990 Physcomitrium patens HOM05D004814 ORTHO05D005778 4.8e-42 175.3 124 71.0
Pp3c20_8830 Physcomitrium patens HOM05D004814 ORTHO05D005778 1.4e-41 173.7 102 80.4
Mapoly0009s0107 Marchantia polymorpha HOM05D004814 ORTHO05D005778 9.0e-41 171.0 202 52.0
SEGI_32296 Sequoiadendron giganteum HOM05D004814 ORTHO05D005778 1.6e-37 160.2 115 68.7
CBR_g19640 Chara braunii HOM05D004814 ORTHO05D005778 4.3e-35 152.1 144 54.9
MSTRG.13015 Avicennia marina HOM05D004814 ORTHO05D005778 2.2e-34 149.8 154 57.1
SMO228G0012 Selaginella moellendorffii HOM05D004814 ORTHO05D005778 9.0e-33 144.4 115 60.0
MCO07G521 Micromonas commoda HOM05D004814 ORTHO05D005778 5.5e-30 135.2 99 63.6
PRCOL_00000430 Prasinoderma coloniale HOM05D004814 ORTHO05D005778 1.0e-23 114.4 100 52.0
BolC1t05144H Brassica oleracea HOM05D004814 ORTHO05D005778 1.9e-22 110.2 107 71.0
Cre03.g195650 Chlamydomonas reinhardtii HOM05D004814 ORTHO05D005778 3.0e-20 102.8 117 45.3
vmacro17432 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 5.9e-08 62.0 206 33.5


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