Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p54740 Brassica napus HOM05D000435 ORTHO05D101094 1.8e-30 135.2 66 100.0
AL3G24980 Arabidopsis lyrata HOM05D000435 ORTHO05D000430 1.7e-15 85.5 57 73.7
AT3G13220 Arabidopsis thaliana HOM05D000435 ORTHO05D000430 1.7e-15 85.5 57 73.7
Carub.0003s1257 Capsella rubella HOM05D000435 ORTHO05D000430 2.8e-15 84.7 57 70.2
CARHR087810 Cardamine hirsuta HOM05D000435 ORTHO05D000430 3.1e-14 81.3 57 70.2
Thhalv10020198m.g Eutrema salsugineum HOM05D000435 ORTHO05D000430 9.2e-14 79.7 52 73.1
A01p40340 Brassica napus HOM05D000435 ORTHO05D000430 1.6e-13 79.0 57 68.4
C01p51870 Brassica napus HOM05D000435 ORTHO05D000430 1.6e-13 79.0 57 68.4
BolC1t05135H Brassica oleracea HOM05D000435 ORTHO05D000430 1.6e-13 79.0 57 68.4
BraA01t04069Z Brassica rapa HOM05D000435 ORTHO05D000430 1.6e-13 79.0 57 68.4
Sp3g11390 Schrenkiella parvula HOM05D000435 ORTHO05D000430 2.0e-13 78.6 57 66.7
BcaB04g21003 Brassica carinata HOM05D000435 ORTHO05D000430 2.7e-13 78.2 45 80.0
Ciclev10010223m.g Citrus clementina HOM05D000435 ORTHO05D000430 3.9e-12 74.3 57 63.2
TAR627G0575 Trochodendron aralioides HOM05D003572 ORTHO05D004118 5.0e-12 73.9 59 52.5
THA.LOC104815690 Tarenaya hassleriana HOM05D000435 ORTHO05D000430 1.9e-11 72.0 52 67.3
Aa31LG8G420 Aethionema arabicum HOM05D000435 ORTHO05D000430 3.3e-11 71.2 55 61.8
GSVIVG01014733001 Vitis vinifera HOM05D000435 ORTHO05D000430 9.5e-11 69.7 57 59.6
Atru.chr2.3749 Acer truncatum HOM05D000435 ORTHO05D000430 1.6e-10 68.9 57 59.6
DCAR_017069 Daucus carota HOM05D000435 ORTHO05D000430 2.1e-10 68.6 58 55.2
Atru.chr2.3763 Acer truncatum HOM05D000435 ORTHO05D000430 3.6e-10 67.8 51 64.7
CiPaw.11G206300 Carya illinoinensis HOM05D000435 ORTHO05D000430 3.6e-10 67.8 57 54.4
COL.COLO4_07733 Corchorus olitorius HOM05D003572 ORTHO05D004118 3.6e-10 67.8 50 62.0
TWI39G0143 Tripterygium wilfordii HOM05D000435 ORTHO05D000430 3.6e-10 67.8 58 60.3
Cfa016927 Carpinus fangiana HOM05D000435 ORTHO05D000430 4.7e-10 67.4 58 55.2
Sabra16G0243600 Salix brachista HOM05D000435 ORTHO05D000430 6.1e-10 67.0 59 57.6
Dinv10357 Davidia involucrata HOM05D000435 ORTHO05D000430 8.0e-10 66.6 57 52.6
Haze_09858 Corylus avellana HOM05D000435 ORTHO05D000430 1.0e-09 66.2 57 56.1
Oeu005470.2 Olea europaea HOM05D000435 ORTHO05D000430 1.8e-09 65.5 59 50.8
Cpa.g.sc12.135 Carica papaya HOM05D000435 ORTHO05D000430 3.1e-09 64.7 57 56.1
QL08p003237 Quercus lobata HOM05D000435 ORTHO05D000430 3.1e-09 64.7 58 55.2
Gohir.A08G025300 Gossypium hirsutum HOM05D000435 ORTHO05D000430 4.0e-09 64.3 52 55.8
Gohir.D08G035800 Gossypium hirsutum HOM05D000435 ORTHO05D000430 4.0e-09 64.3 52 55.8
Gorai.004G033800 Gossypium raimondii HOM05D000435 ORTHO05D000430 4.0e-09 64.3 52 55.8
Lalb_Chr20g0114061 Lupinus albus HOM05D000435 ORTHO05D000430 4.0e-09 64.3 52 63.5
Duzib170G0379 Durio zibethinus HOM05D000435 ORTHO05D000430 5.2e-09 63.9 50 58.0
Lsat_1_v5_gn_7_114141 Lactuca sativa HOM05D000435 ORTHO05D000430 5.2e-09 63.9 57 52.6
DCAR_013252 Daucus carota HOM05D000435 ORTHO05D000430 6.8e-09 63.5 60 53.3
Potri.001G370600 Populus trichocarpa HOM05D000435 ORTHO05D000430 6.8e-09 63.5 59 52.5
Hma1.2p1_0193F.1_g083870 Hydrangea macrophylla HOM05D000435 ORTHO05D000430 1.2e-08 62.8 51 52.9
vmacro09627 Vaccinium macrocarpon HOM05D000435 ORTHO05D000430 1.2e-08 62.8 57 50.9
CANSAT11G0821 Cannabis sativa HOM05D000435 ORTHO05D000430 1.5e-08 62.4 59 52.5
Thecc.07G008500 Theobroma cacao HOM05D000435 ORTHO05D000430 1.5e-08 62.4 52 53.8
Glyma.08G332100 Glycine max HOM05D000435 ORTHO05D000430 2.0e-08 62.0 52 59.6
Nn2g15498 Nelumbo nucifera HOM05D000435 ORTHO05D000430 2.0e-08 62.0 59 50.8
RcHm_v2.0_Chr5g0075901 Rosa chinensis HOM05D000435 ORTHO05D000430 2.6e-08 61.6 58 53.4
HanXRQChr04g0114551 Helianthus annuus HOM05D000435 ORTHO05D000430 4.4e-08 60.8 57 50.9
Aqoxy3G03979 Aquilegia oxysepala HOM05D000435 ORTHO05D000430 5.8e-08 60.5 60 50.0
CSS0004404 Camellia sinensis var. sinensis HOM05D000435 ORTHO05D000430 5.8e-08 60.5 57 49.1
CSS0032781 Camellia sinensis var. sinensis HOM05D000435 ORTHO05D000430 5.8e-08 60.5 57 49.1
Eucgr.F03676 Eucalyptus grandis HOM05D000435 ORTHO05D000430 7.5e-08 60.1 57 54.4
Manes.03G143200 Manihot esculenta HOM05D000435 ORTHO05D000430 7.5e-08 60.1 50 60.0
FvH4_3g42410 Fragaria vesca HOM05D000435 ORTHO05D000430 9.8e-08 59.7 58 53.4
FAN11G3608 Fragaria x ananassa HOM05D000435 ORTHO05D000430 9.8e-08 59.7 58 53.4
FAN21G0356 Fragaria x ananassa HOM05D000435 ORTHO05D000430 9.8e-08 59.7 58 53.4
FAN25G2805 Fragaria x ananassa HOM05D000435 ORTHO05D000430 9.8e-08 59.7 58 53.4
FAN28G0967 Fragaria x ananassa HOM05D000435 ORTHO05D000430 9.8e-08 59.7 58 53.4
HanXRQChr11g0334421 Helianthus annuus HOM05D000435 ORTHO05D000430 9.8e-08 59.7 58 51.7
Lj1A893T55 Lonicera japonica HOM05D000435 ORTHO05D000430 9.8e-08 59.7 59 44.1
Lj6g0002997 Lotus japonicus HOM05D000435 ORTHO05D000430 9.8e-08 59.7 52 59.6
Glyma.18G074800 Glycine max HOM05D000435 ORTHO05D000430 1.3e-07 59.3 52 61.5
Ca_12447_v3 Cicer arietinum L. HOM05D000435 ORTHO05D000430 1.7e-07 58.9 52 61.5
FAN16G3565 Fragaria x ananassa HOM05D000435 ORTHO05D000430 1.7e-07 58.9 58 53.4
MD11G1036200 Malus domestica HOM05D000435 ORTHO05D000430 1.7e-07 58.9 58 53.4
Psat0s3858g0080 Pisum sativum HOM05D000435 ORTHO05D000430 2.9e-07 58.2 51 60.8
Psat0s4150g0240 Pisum sativum HOM05D000435 ORTHO05D000430 2.9e-07 58.2 50 60.0
Sc03g0011590 Simmondsia chinensis HOM05D000435 ORTHO05D000430 3.7e-07 57.8 50 58.0
Actinidia03625 Actinidia chinensis HOM05D000435 ORTHO05D000430 4.9e-07 57.4 58 44.8
Medtr5g096390 Medicago truncatula HOM05D000435 ORTHO05D000430 1.1e-06 56.2 50 58.0
AUR62017136 Chenopodium quinoa HOM05D000435 ORTHO05D000430 1.4e-06 55.8 50 60.0
Glyma.14G012000 Glycine max HOM05D000435 ORTHO05D000430 1.4e-06 55.8 49 57.1
VMungo0540G1677 Vigna mungo HOM05D003572 ORTHO05D004118 1.4e-06 55.8 49 59.2
MBI15_g38526_MAGBIO Magnolia biondii HOM05D000435 ORTHO05D000430 1.9e-06 55.5 49 51.0
Migut.M01629 Erythranthe guttata HOM05D000435 ORTHO05D000430 2.4e-06 55.1 55 50.9
LjContig00081g0009877 Lotus japonicus HOM05D000435 ORTHO05D000430 2.4e-06 55.1 50 58.0
Phvul.006G059212 Phaseolus vulgaris HOM05D000435 ORTHO05D000430 2.4e-06 55.1 52 55.8
SGA_v2.0_scaffold171G38846 Striga asiatica HOM05D000435 ORTHO05D000430 2.4e-06 55.1 60 48.3
AUR62035671 Chenopodium quinoa HOM05D000435 ORTHO05D000430 3.2e-06 54.7 50 60.0
ATR0751G105 Amborella trichopoda HOM05D000435 ORTHO05D000430 4.1e-06 54.3 56 51.8
EL10Ac4g07534 Beta vulgaris HOM05D000435 ORTHO05D000430 4.1e-06 54.3 45 62.2
Glyma.02G302200 Glycine max HOM05D000435 ORTHO05D000430 4.1e-06 54.3 49 57.1
Lalb_Chr10g0107501 Lupinus albus HOM05D000435 ORTHO05D000430 4.1e-06 54.3 49 59.2
Phvul.008G280800 Phaseolus vulgaris HOM05D000435 ORTHO05D000430 4.1e-06 54.3 50 56.0
Cc05_g15220 Coffea canephora HOM05D000435 ORTHO05D000430 7.0e-06 53.5 57 47.4
Nitab4.5_0010643g0020 Nicotiana tabacum HOM05D000435 ORTHO05D000430 7.0e-06 53.5 57 47.4
Peaxi162Scf00139g01031 Petunia axillaris HOM05D000435 ORTHO05D000430 7.0e-06 53.5 57 47.4
CDE02G3494 Ceratophyllum demersum HOM05D000435 ORTHO05D000430 9.2e-06 53.1 58 50.0
TPR.G17959 Trifolium pratense HOM05D000435 ORTHO05D000430 9.2e-06 53.1 52 59.6


User provided reference genes

Program Settings