Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28579 Brassica carinata HOM05D005030 ORTHO05D006490 0.0e+00 2602.0 1326 100.0
C05p46820 Brassica napus HOM05D005030 ORTHO05D006490 0.0e+00 2602.0 1326 100.0
BolC5t33412H Brassica oleracea HOM05D005030 ORTHO05D006490 0.0e+00 2602.0 1326 100.0
BraA05t21931Z Brassica rapa HOM05D005030 ORTHO05D006490 0.0e+00 2494.2 1326 96.7
A05p30890 Brassica napus HOM05D005030 ORTHO05D006490 0.0e+00 2481.8 1327 96.5
BcaB06g25924 Brassica carinata HOM05D005030 ORTHO05D006490 0.0e+00 2399.4 1326 92.7
Sp3g16780 Schrenkiella parvula HOM05D005030 ORTHO05D006490 0.0e+00 2310.4 1330 89.1
Thhalv10019906m.g Eutrema salsugineum HOM05D005030 ORTHO05D006490 0.0e+00 2259.6 1331 87.0
CARHR094120 Cardamine hirsuta HOM05D005030 ORTHO05D006490 0.0e+00 2122.8 1330 82.1
AL3G32080 Arabidopsis lyrata HOM05D005030 ORTHO05D006490 0.0e+00 2121.7 1327 82.1
AT3G18730 Arabidopsis thaliana HOM05D005030 ORTHO05D006490 0.0e+00 2097.0 1328 81.6
Carub.0003s1851 Capsella rubella HOM05D005030 ORTHO05D006490 0.0e+00 2051.9 1330 80.3
Aa31LG8G5540 Aethionema arabicum HOM05D005030 ORTHO05D006490 0.0e+00 1979.1 1329 77.1
THA.LOC104821859 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 0.0e+00 1625.9 1338 66.0
THA.LOC104820424 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 0.0e+00 1614.0 1339 65.3
Gorai.002G151400 Gossypium raimondii HOM05D005030 ORTHO05D006490 0.0e+00 1341.6 1371 54.6
Gohir.D11G232200 Gossypium hirsutum HOM05D005030 ORTHO05D006490 0.0e+00 1337.0 1371 54.5
Gohir.A11G230400 Gossypium hirsutum HOM05D005030 ORTHO05D006490 0.0e+00 1335.9 1365 54.5
Duzib147G1675 Durio zibethinus HOM05D005030 ORTHO05D006490 0.0e+00 1332.4 1362 54.5
Thecc.01G124600 Theobroma cacao HOM05D005030 ORTHO05D006490 0.0e+00 1330.1 1361 54.8
Ciclev10024723m.g Citrus clementina HOM05D005030 ORTHO05D006490 0.0e+00 1324.7 1355 54.8
Atru.chr4.774 Acer truncatum HOM05D005030 ORTHO05D006490 0.0e+00 1323.5 1367 53.4
Actinidia06653 Actinidia chinensis HOM05D005030 ORTHO05D006490 0.0e+00 1276.9 1367 53.1
Dinv24313 Davidia involucrata HOM05D005030 ORTHO05D006490 0.0e+00 1266.1 1373 52.4
Potri.007G110800 Populus trichocarpa HOM05D005030 ORTHO05D006490 0.0e+00 1266.1 1363 52.2
GSVIVG01026545001 Vitis vinifera HOM05D005030 ORTHO05D006490 0.0e+00 1261.1 1358 52.8
TWI31G0652 Tripterygium wilfordii HOM05D005030 ORTHO05D006490 0.0e+00 1250.0 1347 52.8
Cfa002838 Carpinus fangiana HOM05D005030 ORTHO05D006490 0.0e+00 1239.2 1372 52.4
Eucgr.H04934 Eucalyptus grandis HOM05D005030 ORTHO05D006490 0.0e+00 1231.9 1347 52.5
Nn5g28681 Nelumbo nucifera HOM05D005030 ORTHO05D006490 0.0e+00 1224.5 1365 50.5
Prupe.3G147500 Prunus persica HOM05D005030 ORTHO05D006490 0.0e+00 1216.8 1360 50.7
Sabra07G0090700 Salix brachista HOM05D005030 ORTHO05D006490 0.0e+00 1215.7 1450 48.6
PGR102G2159 Punica granatum HOM05D005030 ORTHO05D006490 0.0e+00 1211.8 1354 51.3
MBI18_g25945_MAGBIO Magnolia biondii HOM05D005030 ORTHO05D006490 0.0e+00 1194.9 1362 50.1
CSS0019451 Camellia sinensis var. sinensis HOM05D005030 ORTHO05D006490 0.0e+00 1177.2 1480 48.5
Sc03g0005100 Simmondsia chinensis HOM05D005030 ORTHO05D006490 0.0e+00 1176.8 1358 50.2
Ca_17653_v3 Cicer arietinum L. HOM05D005030 ORTHO05D006490 0.0e+00 1167.9 1359 50.0
Aqoxy5G02153 Aquilegia oxysepala HOM05D005030 ORTHO05D006490 0.0e+00 1167.5 1355 50.0
Sed0011527 Sechium edule HOM05D005030 ORTHO05D006490 0.0e+00 1167.5 1365 50.3
Lj2A602G37 Lonicera japonica HOM05D005030 ORTHO05D006490 0.0e+00 1161.4 1404 48.6
RcHm_v2.0_Chr2g0120111 Rosa chinensis HOM05D005030 ORTHO05D006490 0.0e+00 1160.6 1358 49.3
QL06p030436 Quercus lobata HOM05D005030 ORTHO05D006490 0.0e+00 1150.6 1497 46.3
Cc08_g02710 Coffea canephora HOM05D005030 ORTHO05D006490 0.0e+00 1148.7 1390 48.9
CsaV3_6G041830 Cucumis sativus L. HOM05D005030 ORTHO05D006490 0.0e+00 1146.3 1366 49.3
ClCG01G015590 Citrullus lanatus HOM05D005030 ORTHO05D006490 0.0e+00 1132.9 1357 49.8
Sopen11g001650 Solanum pennellii HOM05D005030 ORTHO05D006490 0.0e+00 1130.2 1384 47.7
VMungo0251G0340 Vigna mungo HOM05D005030 ORTHO05D006490 0.0e+00 1129.4 1350 49.1
Dinv05712 Davidia involucrata HOM05D005030 ORTHO05D006490 0.0e+00 1129.0 1363 50.0
Lsat_1_v5_gn_1_117161 Lactuca sativa HOM05D005030 ORTHO05D006490 0.0e+00 1125.9 1363 48.3
PSO210G3052 Papaver somniferum HOM05D005030 ORTHO05D006490 0.0e+00 1125.2 1369 47.8
HanXRQChr02g0043651 Helianthus annuus HOM05D005030 ORTHO05D006490 0.0e+00 1124.0 1368 47.7
Psat7g048200 Pisum sativum HOM05D005030 ORTHO05D006490 0.0e+00 1123.2 1345 48.3
Hund04465 Selenicereus undatus HOM05D005030 ORTHO05D006490 0.0e+00 1123.2 1367 48.6
FvH4_1g23980 Fragaria vesca HOM05D005030 ORTHO05D006490 0.0e+00 1120.5 1360 47.9
Glyma.05G189400 Glycine max HOM05D005030 ORTHO05D006490 0.0e+00 1107.8 1352 48.2
TPR.G37387 Trifolium pratense HOM05D005030 ORTHO05D006490 0.0e+00 1107.0 1403 46.5
FAN26G2615 Fragaria x ananassa HOM05D005030 ORTHO05D006490 0.0e+00 1106.3 1359 47.6
FAN19G2772 Fragaria x ananassa HOM05D005030 ORTHO05D006490 0.0e+00 1105.9 1396 46.8
Nitab4.5_0002909g0070 Nicotiana tabacum HOM05D005030 ORTHO05D006490 0.0e+00 1103.2 1380 48.4
DCAR_001349 Daucus carota HOM05D005030 ORTHO05D006490 0.0e+00 1102.8 1441 46.4
Medtr8g093100 Medicago truncatula HOM05D005030 ORTHO05D006490 0.0e+00 1102.0 1350 47.5
COL.COLO4_13999 Corchorus olitorius HOM05D005030 ORTHO05D006490 0.0e+00 1101.3 1383 47.4
Phvul.002G270100 Phaseolus vulgaris HOM05D005030 ORTHO05D006490 0.0e+00 1099.7 1358 48.4
PSO832G2315 Papaver somniferum HOM05D005030 ORTHO05D006490 0.0e+00 1094.3 1379 47.4
arahy.Tifrunner.gnm1.ann1.CRY23I Arachis hypogaea HOM05D005030 ORTHO05D006490 0.0e+00 1092.4 1350 48.2
FAN28G1848 Fragaria x ananassa HOM05D005030 ORTHO05D006490 0.0e+00 1092.0 1396 46.6
Migut.H01102 Erythranthe guttata HOM05D005030 ORTHO05D006490 0.0e+00 1090.1 1363 48.3
arahy.Tifrunner.gnm1.ann1.HR53B8 Arachis hypogaea HOM05D005030 ORTHO05D006490 0.0e+00 1088.9 1349 48.1
AUR62017924 Chenopodium quinoa HOM05D005030 ORTHO05D006490 0.0e+00 1087.8 1357 46.6
MELO3C008038.2 Cucumis melo HOM05D005030 ORTHO05D006490 0.0e+00 1087.4 1429 46.7
FAN23G1259 Fragaria x ananassa HOM05D005030 ORTHO05D006490 0.0e+00 1084.7 1398 46.1
CANSAT01G2434 Cannabis sativa HOM05D005030 ORTHO05D006490 0.0e+00 1083.6 1338 48.4
AUR62003613 Chenopodium quinoa HOM05D005030 ORTHO05D006490 0.0e+00 1082.4 1363 45.7
Glyma.08G147000 Glycine max HOM05D005030 ORTHO05D006490 0.0e+00 1078.5 1348 47.3
Os02g0782800 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 3.6e-311 1072.0 1367 46.3
Oeu037792.2 Olea europaea HOM05D005030 ORTHO05D006490 3.1e-310 1068.9 1412 46.3
Peaxi162Scf00012g02419 Petunia axillaris HOM05D005030 ORTHO05D006490 2.0e-309 1066.2 1417 45.7
Ah.03g146670 Amaranthus hybridus HOM05D005030 ORTHO05D006490 1.1e-307 1060.4 1342 46.6
Manes.12G152000 Manihot esculenta HOM05D005030 ORTHO05D006490 1.0e-305 1053.9 1054 55.6
Nitab4.5_0003048g0010 Nicotiana tabacum HOM05D005030 ORTHO05D006490 9.0e-302 1040.8 1414 45.9
ECA240G4559 Erigeron canadensis HOM05D005030 ORTHO05D006490 3.2e-299 1032.3 1321 47.9
Lalb_Chr13g0296501 Lupinus albus HOM05D005030 ORTHO05D006490 1.2e-298 1030.4 1362 46.4
Lalb_Chr12g0203281 Lupinus albus HOM05D005030 ORTHO05D006490 3.7e-295 1018.8 1350 45.9
SGA_v2.0_scaffold137G35137 Striga asiatica HOM05D005030 ORTHO05D006490 4.8e-295 1018.5 1421 44.0
Lj4g0022240 Lotus japonicus HOM05D005030 ORTHO05D006490 1.9e-291 1006.5 1359 45.3
ATR0772G104 Amborella trichopoda HOM05D005030 ORTHO05D006490 3.2e-291 1005.7 1363 44.2
CDE06G1651 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 4.5e-285 985.3 1347 44.8
CiPaw.03G127500 Carya illinoinensis HOM05D005030 ORTHO05D006490 3.2e-283 979.2 1375 45.0
unitig_0.g2514 Utricularia gibba HOM05D005030 ORTHO05D006490 1.7e-271 940.3 1343 43.9
Cc07_g17780 Coffea canephora HOM05D005030 ORTHO05D006490 2.0e-269 933.3 1276 45.2
Rhsim10G0138800 Rhododendron simsii HOM05D005030 ORTHO05D006490 7.7e-269 931.4 1354 44.2
Zm00001eb192940 Zea mays HOM05D005030 ORTHO05D006490 3.2e-267 926.0 1097 49.0
MD00G1172700 Malus domestica HOM05D005030 ORTHO05D006490 5.7e-248 862.1 1358 40.1
HPP92_005719 Vanilla planifolia HOM05D005030 ORTHO05D006490 7.0e-246 855.1 1296 41.7
Hma1.2p1_0006F.1_g004750 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 7.6e-208 728.8 909 47.0
Cpa.g.sc42.108 Carica papaya HOM05D005030 ORTHO05D006490 4.4e-192 676.4 691 54.3
Haze_25135 Corylus avellana HOM05D005030 ORTHO05D006490 1.9e-190 671.0 919 45.9
Solyc11g005690.3 Solanum lycopersicum HOM05D005030 ORTHO05D006490 2.5e-187 660.6 858 46.6
Cpa.g.sc42.107 Carica papaya HOM05D005030 ORTHO05D006490 4.2e-182 643.3 647 55.6
MSTRG.2678 Avicennia marina HOM05D005030 ORTHO05D006490 4.6e-181 639.8 639 55.2
SHI11439 Sapria himalayana HOM05D005030 ORTHO05D006490 1.0e-180 638.6 649 53.8
TAR381G0402 Trochodendron aralioides HOM05D005030 ORTHO05D006490 2.5e-171 607.4 711 48.9
MD09G1255500 Malus domestica HOM05D005030 ORTHO05D006490 2.3e-164 584.3 930 42.5
CiPaw.03G127200 Carya illinoinensis HOM05D005030 ORTHO05D006490 4.5e-160 570.1 827 44.1
CiPaw.03G127100 Carya illinoinensis HOM05D005030 ORTHO05D006490 8.8e-156 555.8 471 59.9
Mapoly0047s0105 Marchantia polymorpha HOM05D005030 ORTHO05D006490 1.4e-153 548.5 1326 32.5
CiPaw.03G127600 Carya illinoinensis HOM05D005030 ORTHO05D006490 7.2e-150 536.2 484 57.9
SEGI_29284 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 2.6e-144 517.7 638 45.1
SMO203G0163 Selaginella moellendorffii HOM05D005030 ORTHO05D006490 2.9e-143 514.2 1338 30.0
Pp3c6_6440 Physcomitrium patens HOM05D005030 ORTHO05D006490 5.5e-142 510.0 1330 30.5
MSTRG.2677 Avicennia marina HOM05D005030 ORTHO05D006490 6.7e-140 503.1 598 47.3
AagrBONN_evm.TU.Sc2ySwM_228.5700 Anthoceros agrestis HOM05D005030 ORTHO05D006490 2.1e-133 481.5 1162 31.4
Haze_25140 Corylus avellana HOM05D005030 ORTHO05D006490 2.7e-128 464.5 358 65.6
MD17G1248700 Malus domestica HOM05D005030 ORTHO05D000105 2.0e-120 438.3 354 63.6
CAN.G802.6 Capsicum annuum HOM05D005030 ORTHO05D006490 5.9e-120 436.8 515 50.1
CDE08G0761 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 8.0e-117 426.4 358 59.2
EL10Ac6g15267 Beta vulgaris HOM05D005030 ORTHO05D006490 1.7e-111 408.7 1020 32.3
SEGI_07118 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 2.3e-111 408.3 414 49.5
SEGI_08752 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 1.7e-95 355.5 675 36.6
ECA234G2315 Erigeron canadensis HOM05D005030 ORTHO05D006490 8.4e-90 336.7 439 42.1
BcaNung06136 Brassica carinata HOM05D005030 ORTHO05D006490 1.5e-83 315.8 205 82.9
Os02g0784100 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 3.6e-77 294.7 244 60.2
SEGI_25247 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 8.1e-77 293.5 326 46.0
FAN23G1614 Fragaria x ananassa HOM05D005030 ORTHO05D006490 3.0e-63 248.4 352 42.6
vmacro12845 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 2.1e-56 225.7 325 44.6
Thecc.01G125300 Theobroma cacao HOM05D005030 ORTHO05D006490 1.1e-49 203.4 366 38.8
TAR381G0325 Trochodendron aralioides HOM05D005030 ORTHO05D006490 5.9e-43 181.0 242 46.7
ECA234G1901 Erigeron canadensis HOM05D005030 ORTHO05D006490 8.5e-42 177.2 273 37.7
vmacro12844 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 4.2e-41 174.9 321 35.8
PGSC0003DMG400025561 Solanum tuberosum HOM05D005030 ORTHO05D006490 1.2e-35 156.8 272 36.8
TAR625G0665 Trochodendron aralioides HOM05D005030 ORTHO05D006490 3.6e-32 145.2 121 60.3
CBR_g36663 Chara braunii HOM05D005030 ORTHO05D006490 1.8e-31 142.9 497 26.0
CBR_g61481 Chara braunii HOM05D005030 ORTHO05D001575 2.8e-29 135.6 382 27.0
MD17G1248600 Malus domestica HOM05D005030 ORTHO05D006490 3.7e-29 135.2 275 34.5
vmacro12843 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 1.0e-26 127.1 201 46.8
SEGI_13201 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.0e-23 115.2 423 28.6
CBR_g36665 Chara braunii HOM05D005030 ORTHO05D006490 5.7e-22 111.3 495 21.8
SEGI_13008 Sequoiadendron giganteum HOM05D005030 ORTHO05D050943 1.8e-20 106.3 417 24.5
Sopen11g004310 Solanum pennellii HOM05D000399 ORTHO05D000304 1.0e-18 100.5 140 42.9
TAR376G0117 Trochodendron aralioides HOM05D005030 ORTHO05D006490 3.2e-17 95.5 162 38.9
Hma1.2p1_0006F.1_g004730 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 6.1e-16 91.3 115 46.1
MBI11_g38367_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D010488 1.8e-12 79.7 71 57.7
SEGI_37730 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 5.4e-12 78.2 284 28.2
Sc05g0004550 Simmondsia chinensis HOM05D005030 ORTHO05D006490 4.0e-07 62.0 83 44.6


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