Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p43730 Brassica napus HOM05D001306 ORTHO05D031970 4.2e-49 197.6 92 100.0
BcaC05g28312 Brassica carinata HOM05D001306 ORTHO05D031970 1.1e-38 162.9 91 87.9
BolC5t33089H Brassica oleracea HOM05D001306 ORTHO05D031970 4.1e-36 154.5 90 83.3
Thhalv10020212m.g Eutrema salsugineum HOM05D001306 ORTHO05D001159 3.2e-33 144.8 89 77.5
Sp3g18600 Schrenkiella parvula HOM05D001306 ORTHO05D001159 5.5e-33 144.1 89 75.3
BcaB04g20644 Brassica carinata HOM05D001306 ORTHO05D001159 4.7e-32 141.0 89 74.2
A01p34220 Brassica napus HOM05D001306 ORTHO05D001159 6.1e-32 140.6 89 74.2
BcaC09g49002 Brassica carinata HOM05D001306 ORTHO05D001159 8.0e-32 140.2 89 73.0
BraA01t03522Z Brassica rapa HOM05D001306 ORTHO05D001159 2.3e-31 138.7 89 73.0
BcaB06g26123 Brassica carinata HOM05D001306 ORTHO05D001159 8.8e-31 136.7 64 95.3
C01p43610 Brassica napus HOM05D001306 ORTHO05D001159 4.4e-30 134.4 89 69.7
BolC1t04322H Brassica oleracea HOM05D001306 ORTHO05D001159 4.4e-30 134.4 89 69.7
AL3G34440 Arabidopsis lyrata HOM05D001306 ORTHO05D001159 1.3e-29 132.9 89 70.8
BcaB04g19116 Brassica carinata HOM05D001306 ORTHO05D001159 1.7e-29 132.5 89 73.0
Carub.0003s2056 Capsella rubella HOM05D001306 ORTHO05D001159 3.7e-29 131.3 81 75.3
AT3G20580 Arabidopsis thaliana HOM05D001306 ORTHO05D001159 4.8e-29 131.0 89 68.5
BraA03t13336Z Brassica rapa HOM05D001306 ORTHO05D001159 8.2e-29 130.2 90 71.1
A03p41830 Brassica napus HOM05D001306 ORTHO05D001159 1.8e-28 129.0 90 70.0
BcaC01g03547 Brassica carinata HOM05D001306 ORTHO05D001159 3.1e-28 128.3 65 90.8
C03p51210 Brassica napus HOM05D001306 ORTHO05D001159 3.1e-28 128.3 65 90.8
BolC3t17411H Brassica oleracea HOM05D001306 ORTHO05D001159 3.1e-28 128.3 65 90.8
CARHR096370 Cardamine hirsuta HOM05D001306 ORTHO05D001159 9.1e-20 100.1 66 74.2
THA.LOC104798780 Tarenaya hassleriana HOM05D001306 ORTHO05D001159 1.7e-18 95.9 91 53.8
THA.LOC104816922 Tarenaya hassleriana HOM05D001306 ORTHO05D001159 8.5e-18 93.6 91 49.5
Aa31LG8G7390 Aethionema arabicum HOM05D001306 ORTHO05D001159 7.5e-14 80.5 63 61.9
Aa31LG3G10700 Aethionema arabicum HOM05D001306 ORTHO05D001159 8.6e-10 67.0 57 54.4
TWI39G0978 Tripterygium wilfordii HOM05D001306 ORTHO05D001159 1.5e-09 66.2 57 50.9
CAN.G1110.5 Capsicum annuum HOM05D001306 ORTHO05D001159 3.3e-09 65.1 83 39.8
Peaxi162Scf00407g00039 Petunia axillaris HOM05D001306 ORTHO05D001159 5.6e-09 64.3 87 42.5
Sopen10g002400 Solanum pennellii HOM05D001306 ORTHO05D001159 1.2e-08 63.2 81 38.3
CiPaw.11G185000 Carya illinoinensis HOM05D001306 ORTHO05D001159 1.6e-08 62.8 86 37.2
Nitab4.5_0002342g0060 Nicotiana tabacum HOM05D001306 ORTHO05D001159 2.1e-08 62.4 81 43.2
Sabra16G0284500 Salix brachista HOM05D001306 ORTHO05D001159 2.8e-08 62.0 84 40.5
Solyc10g006450.3 Solanum lycopersicum HOM05D001306 ORTHO05D001159 3.6e-08 61.6 81 38.3
MELO3C018094.2 Cucumis melo HOM05D001306 ORTHO05D001159 4.7e-08 61.2 63 49.2
Nitab4.5_0008018g0010 Nicotiana tabacum HOM05D001306 ORTHO05D001159 1.0e-07 60.1 81 38.3
Peaxi162Scf00450g00875 Petunia axillaris HOM05D001306 ORTHO05D001159 1.0e-07 60.1 56 51.8
Sed0018984 Sechium edule HOM05D001306 ORTHO05D001159 1.0e-07 60.1 74 45.9
Nitab4.5_0002229g0150 Nicotiana tabacum HOM05D001306 ORTHO05D001159 1.8e-07 59.3 80 41.2
CAN.G337.96 Capsicum annuum HOM05D001306 ORTHO05D001159 2.3e-07 58.9 80 36.2
Potri.001G419000 Populus trichocarpa HOM05D001306 ORTHO05D001159 4.0e-07 58.2 82 37.8
PGSC0003DMG400014428 Solanum tuberosum HOM05D001306 ORTHO05D001159 4.0e-07 58.2 65 40.0
Ah.04g165570 Amaranthus hybridus HOM05D001306 ORTHO05D001159 5.2e-07 57.8 90 38.9
Potri.011G135200 Populus trichocarpa HOM05D001306 ORTHO05D001159 5.2e-07 57.8 67 49.3
Haze_09630 Corylus avellana HOM05D001306 ORTHO05D001159 8.9e-07 57.0 61 45.9
Solyc07g064200.4 Solanum lycopersicum HOM05D001306 ORTHO05D001159 8.9e-07 57.0 80 37.5
PGSC0003DMG400001032 Solanum tuberosum HOM05D001306 ORTHO05D001159 1.2e-06 56.6 80 38.8
Duzib213G0807 Durio zibethinus HOM05D001306 ORTHO05D001159 1.5e-06 56.2 80 38.8
TAR624G0946 Trochodendron aralioides HOM05D001306 ORTHO05D001159 1.5e-06 56.2 66 42.4
MD03G1209900 Malus domestica HOM05D001306 ORTHO05D001159 2.0e-06 55.8 85 34.1
QL08p012745 Quercus lobata HOM05D001306 ORTHO05D001159 2.0e-06 55.8 86 36.0
QL08p012872 Quercus lobata HOM05D001306 ORTHO05D001159 2.0e-06 55.8 86 36.0
Sopen07g032340 Solanum pennellii HOM05D001306 ORTHO05D001159 2.0e-06 55.8 80 37.5
Cfa020403 Carpinus fangiana HOM05D001306 ORTHO05D001159 2.6e-06 55.5 50 52.0
Thecc.07G050500 Theobroma cacao HOM05D001306 ORTHO05D001159 2.6e-06 55.5 81 42.0
Ca_01739_v3 Cicer arietinum L. HOM05D001306 ORTHO05D001159 3.4e-06 55.1 62 43.5
Nitab4.5_0013434g0010 Nicotiana tabacum HOM05D001306 ORTHO05D001159 3.4e-06 55.1 80 36.2
SGA_v2.0_scaffold22G09783 Striga asiatica HOM05D001306 ORTHO05D001159 3.4e-06 55.1 50 48.0
Duzib268G1798 Durio zibethinus HOM05D001306 ORTHO05D001159 4.4e-06 54.7 87 37.9
Nn1g07059 Nelumbo nucifera HOM05D001306 ORTHO05D001159 4.4e-06 54.7 57 45.6
Actinidia35325 Actinidia chinensis HOM05D001306 ORTHO05D001159 5.7e-06 54.3 66 42.4
Eucgr.F03435 Eucalyptus grandis HOM05D001306 ORTHO05D001159 5.7e-06 54.3 47 46.8
Aqoxy3G01005 Aquilegia oxysepala HOM05D001306 ORTHO05D001159 7.5e-06 53.9 67 38.8
Carub.0007s1373 Capsella rubella HOM05D001306 ORTHO05D001159 7.5e-06 53.9 62 45.2
AUR62015669 Chenopodium quinoa HOM05D001306 ORTHO05D001159 7.5e-06 53.9 104 31.7
COL.COLO4_09588 Corchorus olitorius HOM05D001306 ORTHO05D001159 7.5e-06 53.9 53 49.1
Atru.chr2.3230 Acer truncatum HOM05D001306 ORTHO05D001159 9.8e-06 53.5 56 44.6
AUR62020534 Chenopodium quinoa HOM05D001306 ORTHO05D001159 9.8e-06 53.5 104 30.8


User provided reference genes

Program Settings