Gene: PGSC0003DMG400001032
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400001032
- Transcript Identifier PGSC0003DMT400002678
- Gene Type Coding gene
- Location ST4.03ch07 : 54402449-54404575 : positive
Gene Family Information
- ID HOM05D001306
- #Genes/#Species 481/97
- Phylogenetic origin
- ID ORTHO05D001159
- #Genes/#Species 471/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- pacid 37434555
- id PGSC0003DMG400001032.v4.03
- uniprot M0ZKG7
Descriptions
- Description COBRA 10
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010215 | IEA | GOA Database | cellulose microfibril organization | |
| GO:0010215 | IEA | InterPro | cellulose microfibril organization | |
| GO:0009860 | ISO | PLAZA Integrative Orthology | pollen tube growth | AT4G27110 |
| GO:0010183 | ISO | PLAZA Integrative Orthology | pollen tube guidance | AT4G27110 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT3G20580 |
| GO:0071555 | ISO | PLAZA Integrative Orthology | cell wall organization | AT4G27110 |
| GO:0009846 | ISO | PLAZA Integrative Orthology | pollen germination | AT3G20580 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031225 | IEA | GOA Database | anchored component of membrane | |
| GO:0031225 | IEA | InterPro | anchored component of membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G20580 |
| GO:0031982 | ISO | PLAZA Integrative Orthology | vesicle | AT4G27110 |
| GO:0016324 | ISO | PLAZA Integrative Orthology | apical plasma membrane | AT4G27110 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G20580 |
| GO:0090406 | ISO | PLAZA Integrative Orthology | pollen tube | AT3G20580 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006918 | COBRA, plant |
| Mapman id | Description |
|---|---|
| 21.1.2.2 | Cell wall organisation.cellulose.cellulose-hemicellulose network assembly.regulatory protein (COB) |