Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p36210 Brassica napus HOM05D001038 ORTHO05D017560 1.5e-211 739.2 360 100.0
BolC5t32344H Brassica oleracea HOM05D001038 ORTHO05D017560 4.3e-150 535.0 288 91.0
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 2.6e-134 482.6 396 66.4
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 1.2e-96 357.5 377 56.5
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-71 273.5 454 40.3
BcaC05g27633 Brassica carinata HOM05D016987 ORTHO05D017560 4.0e-71 272.7 176 81.2
BcaB08g35416 Brassica carinata HOM05D001038 ORTHO05D017560 1.2e-51 208.0 318 44.0
BraA05t21067Z Brassica rapa HOM05D001038 ORTHO05D017560 1.6e-51 207.6 99 93.9
BcaC05g27732 Brassica carinata HOM05D016987 ORTHO05D017560 1.5e-49 201.1 169 68.0
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-45 187.2 425 33.6
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 1.0e-42 178.3 451 31.0
C02p45450 Brassica napus HOM05D001038 ORTHO05D017560 3.9e-42 176.4 173 47.4
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 1.1e-41 174.9 273 37.7
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 9.7e-41 171.8 412 30.8
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-40 170.6 386 32.6
A04p11350 Brassica napus HOM05D001038 ORTHO05D033175 4.8e-40 169.5 282 38.7
BraA04t16797Z Brassica rapa HOM05D001038 ORTHO05D033175 4.8e-40 169.5 282 38.7
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 1.5e-38 164.5 319 34.2
C09p35780 Brassica napus HOM05D001038 ORTHO05D000395 2.9e-37 160.2 168 57.1
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 6.5e-37 159.1 440 29.3
BcaC07g37457 Brassica carinata HOM05D001038 ORTHO05D010763 1.4e-36 157.9 173 48.0
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-35 154.5 465 27.1
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 4.6e-35 152.9 453 30.0
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 7.9e-35 152.1 449 28.5
C09p39680 Brassica napus HOM05D001038 ORTHO05D010763 3.0e-34 150.2 261 37.2
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 5.7e-33 146.0 345 33.9
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 6.3e-32 142.5 310 32.9
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-31 140.2 373 30.0
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-30 137.5 442 28.3
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 2.2e-29 134.0 440 28.2
BraA04t17267Z Brassica rapa HOM05D001038 ORTHO05D014932 1.9e-28 131.0 416 27.2
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 3.2e-28 130.2 180 38.3
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 3.2e-28 130.2 171 39.8
BcaB04g17277 Brassica carinata HOM05D001038 ORTHO05D014932 5.5e-28 129.4 410 28.8
BraA02t08689Z Brassica rapa HOM05D001038 ORTHO05D010763 5.5e-28 129.4 177 40.7
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 2.7e-27 127.1 208 34.1
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 2.7e-27 127.1 208 34.1
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 6.1e-27 125.9 414 26.8
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 6.1e-27 125.9 177 40.1
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 7.9e-27 125.6 449 26.7
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 1.8e-26 124.4 444 27.5
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-25 120.9 445 26.1
A05p28250 Brassica napus HOM05D001038 ORTHO05D019929 2.0e-25 120.9 371 27.8
BraA05t21706Z Brassica rapa HOM05D001038 ORTHO05D019929 2.0e-25 120.9 371 27.8
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-25 120.6 448 26.1
A02p12560 Brassica napus HOM05D001038 ORTHO05D019929 2.6e-25 120.6 372 28.0
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 2.6e-25 120.6 302 31.5
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 3.3e-25 120.2 176 36.4
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 3.3e-25 120.2 128 42.2
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 3.3e-25 120.2 448 26.6
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 4.4e-25 119.8 443 27.3
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 9.7e-25 118.6 272 27.9
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 9.7e-25 118.6 145 42.8
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 4.8e-24 116.3 448 27.0
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 6.3e-24 115.9 285 28.4
BraA01t02618Z Brassica rapa HOM05D016987 ORTHO05D010763 8.2e-24 115.5 168 45.8
C07p30940 Brassica napus HOM05D001038 ORTHO05D014932 1.4e-23 114.8 172 36.6
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 2.4e-23 114.0 457 25.2
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 2.4e-23 114.0 457 25.4
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 2.4e-23 114.0 145 39.3
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 3.1e-23 113.6 179 37.4
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 4.1e-23 113.2 171 36.3
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 4.1e-23 113.2 179 39.7
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 4.1e-23 113.2 179 39.7
BcaB03g16061 Brassica carinata HOM05D001038 ORTHO05D000395 7.0e-23 112.5 392 29.3
BraSC36t46107Z Brassica rapa HOM05D016987 ORTHO05D010763 9.1e-23 112.1 168 44.6
C07p21850 Brassica napus HOM05D001038 ORTHO05D019929 1.2e-22 111.7 377 27.3
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 1.6e-22 111.3 173 36.4
BNapus_Darmor_BZH_scaffold_103p00090 Brassica napus HOM05D016987 ORTHO05D010763 1.6e-22 111.3 168 44.0
BNapus_Darmor_BZH_scaffold_104p00100 Brassica napus HOM05D016987 ORTHO05D010763 1.6e-22 111.3 168 44.0
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-22 111.3 177 35.6
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 3.5e-22 110.2 173 35.8
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 4.5e-22 109.8 253 28.1
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 5.9e-22 109.4 172 33.1
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-21 108.6 450 26.2
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 1.3e-21 108.2 453 25.4
BolC7t42716H Brassica oleracea HOM05D001038 ORTHO05D019929 3.8e-21 106.7 377 26.8
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 1.1e-20 105.1 180 33.9
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 1.5e-20 104.8 175 35.4
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 1.9e-20 104.4 147 36.1
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 2.5e-20 104.0 426 25.6
A03p68390 Brassica napus HOM05D016987 ORTHO05D010763 2.5e-20 104.0 164 43.3
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 3.2e-20 103.6 145 35.9
C04p58380 Brassica napus HOM05D001038 ORTHO05D010763 3.2e-20 103.6 171 35.1
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 9.4e-20 102.1 435 27.4
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 9.4e-20 102.1 129 38.8
BraA08t32953Z Brassica rapa HOM05D001038 ORTHO05D014932 9.4e-20 102.1 119 42.9
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 3.6e-19 100.1 176 31.8
Thhalv10003408m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 4.7e-19 99.8 175 32.0
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 6.1e-19 99.4 136 38.2
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 8.0e-19 99.0 173 32.9
Thhalv10023964m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.0e-18 98.6 175 31.4
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-18 97.1 86 54.7
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 6.7e-18 95.9 145 36.6
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 1.1e-17 95.1 106 41.5
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 1.1e-17 95.1 106 41.5
BcaB08g34843 Brassica carinata HOM05D001038 ORTHO05D010946 1.5e-17 94.7 334 28.1
BcaC08g45228 Brassica carinata HOM05D001038 ORTHO05D010946 3.3e-17 93.6 149 33.6
C05p34670 Brassica napus HOM05D001038 ORTHO05D032287 9.7e-17 92.0 172 33.1
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 9.7e-17 92.0 172 29.7
Thhalv10003372m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.3e-16 91.7 172 29.7
BolC2t07874H Brassica oleracea HOM05D001038 ORTHO05D010946 2.2e-16 90.9 161 31.1
Carub.0004s1123 Capsella rubella HOM05D001038 ORTHO05D000395 3.7e-16 90.1 150 33.3
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 4.8e-16 89.7 170 30.6
Thhalv10023140m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.1e-15 88.6 175 29.1
BcaC06g34914 Brassica carinata HOM05D001038 ORTHO05D019929 1.8e-15 87.8 391 25.3
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 1.8e-15 87.8 175 28.6
Thhalv10015447m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 3.1e-15 87.0 233 27.5
C06p00840 Brassica napus HOM05D001038 ORTHO05D010946 5.3e-15 86.3 173 30.1
BcaB06g28131 Brassica carinata HOM05D001038 ORTHO05D000395 7.0e-15 85.9 397 24.2
C07p18290 Brassica napus HOM05D001038 ORTHO05D010763 7.0e-15 85.9 119 42.0
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 7.0e-15 85.9 173 28.3
BcaC03g14544 Brassica carinata HOM05D001038 ORTHO05D010946 9.1e-15 85.5 173 30.1
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 9.1e-15 85.5 187 29.4
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 2.0e-14 84.3 133 36.1
C09p31530 Brassica napus HOM05D020314 ORTHO05D032005 2.7e-14 84.0 143 32.2
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 4.5e-14 83.2 177 28.2
BcaB01g01614 Brassica carinata HOM05D001038 ORTHO05D014932 5.9e-14 82.8 406 25.6
BraA06t25408Z Brassica rapa HOM05D001038 ORTHO05D010763 1.3e-13 81.6 94 43.6
BolC3t20322H Brassica oleracea HOM05D001038 ORTHO05D010946 1.7e-13 81.3 160 28.1
BolC3t14874H Brassica oleracea HOM05D001038 ORTHO05D010763 3.8e-13 80.1 103 38.8
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 3.8e-13 80.1 261 24.5
CARHR120350 Cardamine hirsuta HOM05D001038 ORTHO05D010763 3.8e-13 80.1 104 39.4
AT2G07240 Arabidopsis thaliana HOM05D001038 ORTHO05D010763 5.0e-13 79.7 176 27.8
BraA06t25316Z Brassica rapa HOM05D001038 ORTHO05D010763 5.0e-13 79.7 102 39.2
Thhalv10015415m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 8.5e-13 79.0 154 31.2
BcaB02g10814 Brassica carinata HOM05D001038 ORTHO05D010946 1.1e-12 78.6 268 23.5
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 1.5e-12 78.2 118 36.4
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 1.5e-12 78.2 95 36.8
BraA01t02230Z Brassica rapa HOM05D001038 ORTHO05D000395 2.5e-12 77.4 102 37.3
C05p38700 Brassica napus HOM05D037879 ORTHO05D027353 2.7e-11 73.9 150 29.3
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 2.7e-11 73.9 170 29.4
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 3.6e-11 73.6 198 24.2
BcaC07g36920 Brassica carinata HOM05D001038 ORTHO05D000395 4.7e-11 73.2 122 44.3
Thhalv10003093m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 8.0e-11 72.4 156 28.2
BolC7t42339H Brassica oleracea HOM05D001038 ORTHO05D010763 2.3e-10 70.9 81 42.0
BcaB02g10826 Brassica carinata HOM05D001038 ORTHO05D021697 3.0e-10 70.5 132 31.8
C07p12200 Brassica napus HOM05D001038 ORTHO05D010763 4.0e-10 70.1 170 28.8
C03p31470 Brassica napus HOM05D001038 ORTHO05D010946 6.8e-10 69.3 198 23.7
AL2G29150 Arabidopsis lyrata HOM05D020011 ORTHO05D021433 1.2e-09 68.6 181 26.5
BcaC01g04978 Brassica carinata HOM05D001038 ORTHO05D010946 1.2e-09 68.6 158 25.3
BolC7t41410H Brassica oleracea HOM05D001038 ORTHO05D010763 1.2e-09 68.6 170 27.6
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 1.2e-09 68.6 125 32.0
BolC4t26248H Brassica oleracea HOM05D001038 ORTHO05D018589 2.0e-09 67.8 229 27.1
BcaC08g44172 Brassica carinata HOM05D001038 ORTHO05D018589 2.6e-09 67.4 92 35.9
C02p39590 Brassica napus HOM05D001038 ORTHO05D021697 2.6e-09 67.4 139 32.4
BolC2t09973H Brassica oleracea HOM05D001038 ORTHO05D021697 2.6e-09 67.4 139 32.4
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 4.4e-09 66.6 154 26.6
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 5.7e-09 66.2 127 37.0
BcaB07g32718 Brassica carinata HOM05D004375 ORTHO05D008558 5.7e-09 66.2 108 31.5
Thhalv10029131m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 5.7e-09 66.2 170 28.2
C08p05940 Brassica napus HOM05D001038 ORTHO05D024385 7.5e-09 65.9 92 34.8
BolC5t31712H Brassica oleracea HOM05D001038 ORTHO05D032287 7.5e-09 65.9 94 35.1
BcaB03g16620 Brassica carinata HOM05D001038 ORTHO05D000395 9.8e-09 65.5 120 34.2
C07p09720 Brassica napus HOM05D001038 ORTHO05D010763 9.8e-09 65.5 170 26.5
BcaC01g03929 Brassica carinata HOM05D001038 ORTHO05D010946 1.3e-08 65.1 171 28.1
AL6G43780 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 1.7e-08 64.7 130 25.4
C01p28010 Brassica napus HOM05D004375 ORTHO05D008558 1.7e-08 64.7 103 33.0
AL5G38970 Arabidopsis lyrata HOM05D020011 ORTHO05D021433 2.2e-08 64.3 305 24.9
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 2.2e-08 64.3 148 23.6
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 2.2e-08 64.3 148 23.6
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 2.8e-08 63.9 188 26.1
C09p12400 Brassica napus HOM05D001038 ORTHO05D019962 2.8e-08 63.9 360 24.4
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 2.8e-08 63.9 188 26.1
Thhalv10001261m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 3.7e-08 63.5 363 23.4
BcaB03g16529 Brassica carinata HOM05D000675 ORTHO05D003044 4.8e-08 63.2 141 27.0
BcaB08g36238 Brassica carinata HOM05D011654 ORTHO05D010946 8.3e-08 62.4 79 38.0
C03p78170 Brassica napus HOM05D000675 ORTHO05D003044 8.3e-08 62.4 148 23.0
BraA04t17363Z Brassica rapa HOM05D000675 ORTHO05D003044 1.1e-07 62.0 188 25.5
Carub.0006s2598 Capsella rubella HOM05D002776 ORTHO05D003044 1.1e-07 62.0 156 27.6
A09p51430 Brassica napus HOM05D000675 ORTHO05D003044 1.4e-07 61.6 97 29.9
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 1.4e-07 61.6 261 22.6
C05p51310 Brassica napus HOM05D000675 ORTHO05D003044 1.8e-07 61.2 99 29.3
Sp4g09840 Schrenkiella parvula HOM05D001038 ORTHO05D010763 1.8e-07 61.2 217 28.1
BcaB05g23703 Brassica carinata HOM05D004375 ORTHO05D008558 3.1e-07 60.5 112 31.2
BcaB05g23866 Brassica carinata HOM05D004375 ORTHO05D008558 3.1e-07 60.5 98 31.6
A04p08430 Brassica napus HOM05D001038 ORTHO05D010946 4.1e-07 60.1 171 24.6
BolC2t11143H Brassica oleracea HOM05D001038 ORTHO05D024385 5.4e-07 59.7 87 34.5
A07p03350 Brassica napus HOM05D000675 ORTHO05D003044 7.0e-07 59.3 97 28.9
BraA05t20771Z Brassica rapa HOM05D000675 ORTHO05D003044 7.0e-07 59.3 97 28.9
BcaC01g03691 Brassica carinata HOM05D000675 ORTHO05D000395 9.1e-07 58.9 99 28.3
C03p49520 Brassica napus HOM05D000675 ORTHO05D003044 9.1e-07 58.9 99 28.3
BolC2t09930H Brassica oleracea HOM05D000675 ORTHO05D000395 1.2e-06 58.5 192 27.6
BcaC02g11195 Brassica carinata HOM05D000675 ORTHO05D000395 1.6e-06 58.2 96 27.1
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 1.6e-06 58.2 148 23.6
C04p19390 Brassica napus HOM05D000675 ORTHO05D003044 1.6e-06 58.2 96 27.1
BolC4t23472H Brassica oleracea HOM05D000675 ORTHO05D003044 1.6e-06 58.2 96 27.1
BolC7t44676H Brassica oleracea HOM05D020011 ORTHO05D021433 1.6e-06 58.2 131 26.7
BcaB03g15207 Brassica carinata HOM05D000675 ORTHO05D000395 2.0e-06 57.8 95 28.4
BcaNung04782 Brassica carinata HOM05D001038 ORTHO05D014932 2.7e-06 57.4 87 37.9
C07p41410 Brassica napus HOM05D020011 ORTHO05D021433 2.7e-06 57.4 131 26.7
BcaB05g23859 Brassica carinata HOM05D001038 ORTHO05D091541 3.5e-06 57.0 52 59.6
A10p11800 Brassica napus HOM05D000675 ORTHO05D003044 5.9e-06 56.2 98 30.6
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 5.9e-06 56.2 105 30.5
A05p27930 Brassica napus HOM05D004375 ORTHO05D008558 7.7e-06 55.8 111 28.8
C05p25450 Brassica napus HOM05D000675 ORTHO05D003044 7.7e-06 55.8 148 23.6
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 7.7e-06 55.8 173 26.0


User provided reference genes

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