Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p30510 Brassica napus HOM05D001678 ORTHO05D032997 5.9e-68 260.8 135 100.0
BcaC05g27161 Brassica carinata HOM05D001678 ORTHO05D001698 2.2e-62 242.3 130 96.9
BolC5t31786H Brassica oleracea HOM05D001678 ORTHO05D001698 1.3e-59 233.0 136 92.6
BcaC03g17938 Brassica carinata HOM05D001678 ORTHO05D001698 7.1e-37 157.5 114 73.7
Carub.0002s1509 Capsella rubella HOM05D001678 ORTHO05D001698 7.1e-37 157.5 134 61.9
Carub.0007s2622 Capsella rubella HOM05D001678 ORTHO05D001698 7.1e-37 157.5 134 61.9
C09p07340 Brassica napus HOM05D001678 ORTHO05D001698 2.0e-31 139.4 88 79.5
BcaC07g37804 Brassica carinata HOM05D001678 ORTHO05D001698 4.0e-24 115.2 129 52.7
BolC8t48193H Brassica oleracea HOM05D001678 ORTHO05D001698 4.0e-24 115.2 129 52.7
A01p29830 Brassica napus HOM05D001678 ORTHO05D001698 6.9e-24 114.4 129 52.7
BraA01t03111Z Brassica rapa HOM05D001678 ORTHO05D001698 6.9e-24 114.4 129 52.7
Carub.0007s0094 Capsella rubella HOM05D001678 ORTHO05D001698 6.9e-24 114.4 134 47.8
C02p32520 Brassica napus HOM05D001678 ORTHO05D001698 7.6e-23 110.9 129 51.2
C07p32060 Brassica napus HOM05D001678 ORTHO05D001698 2.4e-21 105.9 111 54.1
BcaC06g34160 Brassica carinata HOM05D001678 ORTHO05D001698 3.2e-21 105.5 106 55.7
BraA06t25821Z Brassica rapa HOM05D001678 ORTHO05D001698 9.3e-21 104.0 111 51.4
BcaB01g02681 Brassica carinata HOM05D001678 ORTHO05D001698 5.6e-18 94.7 118 47.5
CARHR004570 Cardamine hirsuta HOM05D001678 ORTHO05D001698 6.2e-17 91.3 133 45.9
BcaB01g00604 Brassica carinata HOM05D001678 ORTHO05D001698 1.4e-16 90.1 61 82.0
A04p22040 Brassica napus HOM05D001678 ORTHO05D001698 1.4e-16 90.1 72 61.1
C09p55800 Brassica napus HOM05D001678 ORTHO05D001698 3.1e-16 89.0 72 59.7
C04p25210 Brassica napus HOM05D039589 ORTHO05D001698 4.0e-16 88.6 54 83.3
A01p28360 Brassica napus HOM05D001678 ORTHO05D001698 2.0e-15 86.3 119 46.2
A10p12020 Brassica napus HOM05D001678 ORTHO05D001698 1.4e-13 80.1 97 43.3
AL4G17900 Arabidopsis lyrata HOM05D001678 ORTHO05D001698 2.4e-13 79.3 129 40.3
AL4G17920 Arabidopsis lyrata HOM05D001678 ORTHO05D001698 2.4e-13 79.3 129 40.3
AL4G17660 Arabidopsis lyrata HOM05D001678 ORTHO05D001698 7.1e-13 77.8 115 42.6
BraA10t43304Z Brassica rapa HOM05D001678 ORTHO05D001698 9.3e-13 77.4 97 42.3
A09p37990 Brassica napus HOM05D001678 ORTHO05D001698 1.2e-12 77.0 131 38.9
BraA09t39310Z Brassica rapa HOM05D001678 ORTHO05D001698 1.2e-12 77.0 131 38.9
BraA01t03239Z Brassica rapa HOM05D001678 ORTHO05D001698 7.9e-12 74.3 115 40.9
AT2G29880 Arabidopsis thaliana HOM05D001678 ORTHO05D001698 6.7e-11 71.2 111 38.7
Carub.0004s0707 Capsella rubella HOM05D001678 ORTHO05D001698 6.7e-11 71.2 108 41.7
Carub.0006s3595 Capsella rubella HOM05D001678 ORTHO05D001698 8.7e-11 70.9 78 48.7
Carub.0008s1510 Capsella rubella HOM05D001678 ORTHO05D001698 8.7e-11 70.9 78 48.7
A05p21020 Brassica napus HOM05D001678 ORTHO05D001698 1.1e-10 70.5 153 34.0
Carub.0004s0720 Capsella rubella HOM05D001678 ORTHO05D001698 1.1e-10 70.5 122 38.5
Thhalv10023821m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 1.1e-10 70.5 100 43.0
BcaC01g04115 Brassica carinata HOM05D001678 ORTHO05D001698 1.5e-10 70.1 137 33.6
BcaC04g21001 Brassica carinata HOM05D001678 ORTHO05D001698 1.5e-10 70.1 153 33.3
C09p36790 Brassica napus HOM05D001678 ORTHO05D001698 1.5e-10 70.1 153 33.3
BolC3t16754H Brassica oleracea HOM05D001678 ORTHO05D001698 1.5e-10 70.1 137 33.6
A08p16470 Brassica napus HOM05D001678 ORTHO05D001698 2.5e-10 69.3 153 33.3
Thhalv10029423m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 2.5e-10 69.3 104 40.4
BcaC09g49863 Brassica carinata HOM05D001678 ORTHO05D001698 3.3e-10 68.9 141 33.3
Carub.0006s2633 Capsella rubella HOM05D001678 ORTHO05D001698 3.3e-10 68.9 122 32.8
BcaB08g36227 Brassica carinata HOM05D001678 ORTHO05D001698 4.3e-10 68.6 80 46.2
Thhalv10005278m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 4.3e-10 68.6 134 35.1
Carub.0006s2679 Capsella rubella HOM05D001678 ORTHO05D001698 2.8e-09 65.9 119 37.8
Thhalv10027019m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 4.8e-09 65.1 120 35.8
C03p36980 Brassica napus HOM05D001678 ORTHO05D032997 8.2e-09 64.3 37 89.2
BolC4t24811H Brassica oleracea HOM05D001678 ORTHO05D032997 8.2e-09 64.3 37 89.2
MD03G1206200 Malus domestica HOM05D001678 ORTHO05D001698 8.2e-09 64.3 122 36.9
Carub.0011s0001 Capsella rubella HOM05D001678 ORTHO05D001698 1.1e-08 63.9 124 33.9
AT5G28820 Arabidopsis thaliana HOM05D001678 ORTHO05D001698 1.4e-08 63.5 82 43.9
Thhalv10022272m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 1.8e-08 63.2 143 32.9
AL1G56710 Arabidopsis lyrata HOM05D001678 ORTHO05D001698 2.4e-08 62.8 124 34.7
AL1G65820 Arabidopsis lyrata HOM05D001678 ORTHO05D001698 9.0e-08 60.8 104 38.5
BolC3t20376H Brassica oleracea HOM05D001678 ORTHO05D001698 9.0e-08 60.8 137 30.7
BcaNung00414 Brassica carinata HOM05D001678 ORTHO05D001698 1.2e-07 60.5 118 36.4
Prupe.1G229800 Prunus persica HOM05D001678 ORTHO05D001698 1.5e-07 60.1 119 33.6
BolC3t21566H Brassica oleracea HOM05D001678 ORTHO05D001698 1.3e-06 57.0 141 32.6
Carub.0001s3536 Capsella rubella HOM05D001678 ORTHO05D001698 1.7e-06 56.6 88 36.4
SalBow7G3019 Salvia bowleyana HOM05D010254 ORTHO05D015184 2.2e-06 56.2 117 34.2
BraA05t21006Z Brassica rapa HOM05D001678 ORTHO05D001698 2.9e-06 55.8 140 32.1
BolC9t56511H Brassica oleracea HOM05D001678 ORTHO05D001698 3.8e-06 55.5 140 31.4
BraA04t16704Z Brassica rapa HOM05D001678 ORTHO05D001698 3.8e-06 55.5 140 32.1
MD06G1083900 Malus domestica HOM05D001678 ORTHO05D001698 3.8e-06 55.5 122 33.6
Thhalv10029159m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 6.5e-06 54.7 140 30.0
Prupe.6G020000 Prunus persica HOM05D001678 ORTHO05D001698 6.5e-06 54.7 117 32.5


User provided reference genes

Program Settings