Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p22570 Brassica napus HOM05D011070 ORTHO05D014113 3.3e-62 241.5 119 100.0
C09p65230 Brassica napus HOM05D011070 ORTHO05D014113 4.4e-51 204.5 174 65.5
BcaC04g19213 Brassica carinata HOM05D011070 ORTHO05D014113 3.8e-50 201.4 174 64.9
C07p06730 Brassica napus HOM05D011070 ORTHO05D014113 8.4e-50 200.3 174 66.1
BolC7t41096H Brassica oleracea HOM05D011070 ORTHO05D014113 8.4e-50 200.3 174 66.1
C07p41760 Brassica napus HOM05D011070 ORTHO05D014113 3.2e-49 198.4 174 64.9
C02p46850 Brassica napus HOM05D011070 ORTHO05D014113 3.0e-47 191.8 174 62.6
BolC5t30956H Brassica oleracea HOM05D011070 ORTHO05D033336 1.0e-31 140.2 67 98.5
A03p60810 Brassica napus HOM05D011070 ORTHO05D033336 4.6e-24 114.8 68 83.8
BraA01t03524Z Brassica rapa HOM05D011070 ORTHO05D014113 1.3e-23 113.2 68 82.4
BraA10t42323Z Brassica rapa HOM05D011070 ORTHO05D033336 1.9e-22 109.4 67 83.6
BolC9t59352H Brassica oleracea HOM05D011070 ORTHO05D014113 3.7e-21 105.1 53 96.2
BcaC06g36188 Brassica carinata HOM05D011070 ORTHO05D014113 8.2e-21 104.0 53 98.1
BolC2t10730H Brassica oleracea HOM05D011070 ORTHO05D014113 8.2e-21 104.0 53 96.2
BolC3t21117H Brassica oleracea HOM05D011070 ORTHO05D014113 8.2e-21 104.0 53 96.2
BraA03t15117Z Brassica rapa HOM05D011070 ORTHO05D014113 4.1e-20 101.7 145 47.6
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 1.2e-16 90.1 47 89.4
A01p34250 Brassica napus HOM05D011070 ORTHO05D014113 6.1e-16 87.8 43 97.7
A09p23030 Brassica napus HOM05D002513 ORTHO05D002720 1.1e-12 77.0 47 80.9
BraA09t37907Z Brassica rapa HOM05D002513 ORTHO05D002720 1.1e-12 77.0 47 80.9
BcaC04g21626 Brassica carinata HOM05D002513 ORTHO05D002720 9.1e-12 73.9 47 76.6
C09p29740 Brassica napus HOM05D002513 ORTHO05D002720 9.1e-12 73.9 47 76.6
BolC9t55837H Brassica oleracea HOM05D002513 ORTHO05D002720 9.1e-12 73.9 47 76.6
BcaB07g30777 Brassica carinata HOM05D002513 ORTHO05D002720 7.7e-11 70.9 47 74.5
Sp2g12130 Schrenkiella parvula HOM05D002513 ORTHO05D002720 1.7e-10 69.7 47 74.5
Thhalv10000768m.g Eutrema salsugineum HOM05D002513 ORTHO05D002720 4.2e-09 65.1 47 70.2
BcaC03g16810 Brassica carinata HOM05D030553 ORTHO05D027181 3.0e-07 58.9 36 77.8
AT5G47430 Arabidopsis thaliana HOM05D002513 ORTHO05D002720 1.1e-06 57.0 47 61.7
Carub.0008s0036 Capsella rubella HOM05D002513 ORTHO05D002720 1.1e-06 57.0 47 63.8


User provided reference genes

Program Settings