Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 2.7e-107 392.1 210 100.0
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 1.9e-84 316.2 208 85.1
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 2.7e-83 312.4 169 100.0
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 2.7e-83 312.4 169 100.0
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 2.3e-79 299.3 169 96.4
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 4.4e-78 295.0 169 95.9
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 4.4e-78 295.0 169 95.9
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 2.9e-77 292.4 169 93.5
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 2.9e-77 292.4 169 94.7
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 3.7e-77 292.0 169 94.1
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 3.7e-77 292.0 169 94.1
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 1.4e-76 290.0 169 93.5
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 4.1e-76 288.5 169 92.9
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 4.1e-76 288.5 169 92.9
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 9.2e-76 287.3 169 92.3
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 9.2e-76 287.3 169 92.3
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 9.2e-76 287.3 169 92.3
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 1.2e-75 287.0 169 92.9
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 1.6e-75 286.6 169 92.9
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 3.5e-75 285.4 166 93.4
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 1.4e-71 273.5 169 85.8
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 5.2e-71 271.6 169 86.4
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 8.9e-71 270.8 169 86.4
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 9.9e-70 267.3 169 87.0
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 1.4e-63 246.9 169 76.3
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 2.4e-63 246.1 170 78.2
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 3.1e-63 245.7 174 78.2
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 5.2e-63 245.0 169 78.1
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 5.2e-63 245.0 174 78.2
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 6.8e-63 244.6 174 77.6
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 1.2e-62 243.8 171 78.4
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 1.2e-62 243.8 171 78.4
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 2.6e-62 242.7 170 77.6
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 1.1e-60 237.3 208 64.9
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 2.4e-60 236.1 172 74.4
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 7.1e-60 234.6 170 77.6
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 1.2e-59 233.8 172 75.0
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 2.7e-59 232.6 174 74.7
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 1.3e-58 230.3 170 72.9
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 3.0e-58 229.2 170 72.9
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 8.7e-58 227.6 168 74.4
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 3.3e-57 225.7 169 69.8
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 7.3e-57 224.6 171 70.8
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 9.6e-57 224.2 170 71.8
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 2.8e-56 222.6 169 69.2
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 2.8e-56 222.6 169 70.4
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 3.6e-56 222.2 170 68.8
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 6.2e-56 221.5 169 68.6
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 3.1e-55 219.2 170 71.2
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 4.0e-55 218.8 169 69.2
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 1.2e-54 217.2 169 66.3
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 1.5e-54 216.9 170 68.8
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 1.5e-54 216.9 169 67.5
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 2.0e-54 216.5 170 68.8
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 2.0e-54 216.5 171 69.0
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 2.0e-54 216.5 171 69.0
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 2.0e-54 216.5 169 66.3
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 2.6e-54 216.1 172 67.4
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 2.6e-54 216.1 169 67.5
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 3.4e-54 215.7 169 69.2
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 4.4e-54 215.3 172 68.0
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 4.4e-54 215.3 172 67.4
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 4.4e-54 215.3 169 68.6
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 4.4e-54 215.3 172 68.6
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 5.8e-54 214.9 171 69.0
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 5.8e-54 214.9 170 70.0
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 5.8e-54 214.9 169 68.6
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 5.8e-54 214.9 169 68.0
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 7.6e-54 214.5 169 69.2
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 9.9e-54 214.2 171 69.6
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 9.9e-54 214.2 170 68.8
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 9.9e-54 214.2 169 66.9
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 9.9e-54 214.2 169 67.5
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 1.7e-53 213.4 170 67.6
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 2.2e-53 213.0 171 69.6
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.2e-53 213.0 169 68.0
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 2.9e-53 212.6 169 69.8
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 2.9e-53 212.6 172 66.9
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 2.9e-53 212.6 172 69.8
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 3.8e-53 212.2 170 69.4
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 3.8e-53 212.2 169 65.1
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 3.8e-53 212.2 169 66.3
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 4.9e-53 211.8 169 67.5
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.9e-53 211.8 170 68.8
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 6.4e-53 211.5 170 68.8
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 6.4e-53 211.5 169 66.3
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 8.4e-53 211.1 170 67.6
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 8.4e-53 211.1 170 67.1
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 1.1e-52 210.7 171 66.7
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 1.1e-52 210.7 169 64.5
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 1.1e-52 210.7 170 67.1
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 1.1e-52 210.7 169 66.9
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 1.1e-52 210.7 172 68.0
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 1.1e-52 210.7 170 67.1
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 1.4e-52 210.3 169 65.1
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 2.4e-52 209.5 172 66.3
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 3.2e-52 209.1 170 67.6
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 3.2e-52 209.1 170 65.9
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 3.2e-52 209.1 172 67.4
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 4.2e-52 208.8 172 69.2
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 4.2e-52 208.8 169 65.1
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 7.1e-52 208.0 169 65.7
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 9.3e-52 207.6 161 67.1
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 1.6e-51 206.8 165 67.3
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 2.1e-51 206.5 170 65.3
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 2.7e-51 206.1 169 64.5
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 4.6e-51 205.3 169 64.5
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 4.6e-51 205.3 175 66.3
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 7.8e-51 204.5 169 67.5
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.0e-50 204.1 173 68.2
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 1.0e-50 204.1 167 66.5
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 1.7e-50 203.4 170 64.7
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 1.7e-50 203.4 166 67.5
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 1.7e-50 203.4 169 63.9
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 2.3e-50 203.0 169 66.3
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 3.0e-50 202.6 169 66.3
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 3.9e-50 202.2 172 62.2
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 8.7e-50 201.1 169 64.5
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 8.7e-50 201.1 171 65.5
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 8.7e-50 201.1 171 66.7
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 2.5e-49 199.5 167 62.3
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 3.3e-49 199.1 172 66.9
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 9.6e-49 197.6 171 64.3
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 1.1e-47 194.1 169 64.5
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.4e-47 193.7 161 62.7
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 1.4e-47 193.7 170 64.1
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 1.4e-47 193.7 156 68.6
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 4.0e-47 192.2 170 63.5
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 5.3e-47 191.8 165 63.0
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.2e-46 190.7 172 61.6
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 1.5e-46 190.3 171 63.2
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 2.6e-46 189.5 163 65.0
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 1.7e-45 186.8 171 62.0
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 1.7e-45 186.8 171 62.0
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 1.7e-45 186.8 185 58.4
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 1.1e-44 184.1 158 63.9
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 9.3e-44 181.0 170 59.4
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 7.9e-43 177.9 171 59.6
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 1.0e-42 177.6 170 59.4
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 1.8e-42 176.8 102 80.4
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 1.1e-41 174.1 102 79.4
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 8.1e-40 167.9 170 60.0
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 5.3e-39 165.2 184 51.6
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 3.4e-38 162.5 99 74.7
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 1.0e-37 161.0 100 74.0
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 1.7e-37 160.2 145 64.1
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 9.6e-33 144.4 174 49.4
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 3.7e-32 142.5 148 55.4
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 4.8e-32 142.1 217 42.9
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 9.0e-31 137.9 176 45.5
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 9.0e-31 137.9 176 46.0
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 1.9e-28 130.2 176 42.6
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 7.1e-28 128.3 170 41.8
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 2.1e-27 126.7 146 52.1
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 4.6e-27 125.6 136 52.2
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.5e-25 119.8 70 78.6
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 1.6e-24 117.1 117 51.3
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.6e-24 117.1 70 77.1
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 8.2e-24 114.8 170 43.5
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 1.8e-23 113.6 173 45.7
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.8e-18 97.1 67 70.1
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 6.7e-18 95.1 181 42.0
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.2e-14 84.3 67 58.2
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 5.0e-13 79.0 44 79.5


User provided reference genes

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