Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p01030 Brassica napus HOM05D002523 ORTHO05D021779 5.8e-50 200.7 107 100.0
A10p01020 Brassica napus HOM05D002523 ORTHO05D002951 3.8e-17 91.7 57 78.9
BcaC05g24606 Brassica carinata HOM05D002523 ORTHO05D002951 6.4e-17 90.9 58 77.6
C05p01050 Brassica napus HOM05D002523 ORTHO05D002951 6.4e-17 90.9 58 77.6
BolC5t28886H Brassica oleracea HOM05D002523 ORTHO05D002951 6.4e-17 90.9 58 77.6
BraA10t42380Z Brassica rapa HOM05D002523 ORTHO05D002951 8.4e-17 90.5 59 76.3
AT1G02270 Arabidopsis thaliana HOM05D002523 ORTHO05D002951 1.0e-14 83.6 54 68.5
Sp1g01340 Schrenkiella parvula HOM05D002523 ORTHO05D002951 2.3e-14 82.4 57 71.9
Carub.0001s0128 Capsella rubella HOM05D002523 ORTHO05D002951 3.9e-14 81.6 54 68.5
CARHR001560 Cardamine hirsuta HOM05D002523 ORTHO05D002951 4.3e-13 78.2 54 68.5
AL1G11600 Arabidopsis lyrata HOM05D002523 ORTHO05D002951 7.4e-13 77.4 54 63.0
Thhalv10007319m.g Eutrema salsugineum HOM05D002523 ORTHO05D002951 6.2e-12 74.3 54 66.7
BcaC07g42380 Brassica carinata HOM05D002523 ORTHO05D002951 8.2e-12 73.9 54 68.5
A09p68840 Brassica napus HOM05D001221 ORTHO05D002870 8.2e-12 73.9 54 68.5
BraA09t42223Z Brassica rapa HOM05D001221 ORTHO05D002870 8.2e-12 73.9 54 68.5
C08p53390 Brassica napus HOM05D001221 ORTHO05D002870 1.8e-11 72.8 54 68.5
BolC8t52854H Brassica oleracea HOM05D001221 ORTHO05D002870 1.8e-11 72.8 54 68.5
BraA09t42191Z Brassica rapa HOM05D002523 ORTHO05D021779 2.4e-11 72.4 52 67.3
Aa31LG1G10240 Aethionema arabicum HOM05D002523 ORTHO05D002951 7.6e-10 67.4 65 52.3
THA.LOC104815906 Tarenaya hassleriana HOM05D002523 ORTHO05D002951 1.4e-08 63.2 54 53.7
BcaC07g42322 Brassica carinata HOM05D002523 ORTHO05D002951 3.2e-08 62.0 54 63.0
Sabra02G0132800 Salix brachista HOM05D002523 ORTHO05D002951 1.2e-07 60.1 68 48.5
Cfa003718 Carpinus fangiana HOM05D002523 ORTHO05D002951 6.0e-07 57.8 67 43.3
Haze_15763 Corylus avellana HOM05D002523 ORTHO05D002951 7.9e-07 57.4 67 43.3
THA.LOC104827359 Tarenaya hassleriana HOM05D002523 ORTHO05D002951 2.3e-06 55.8 55 52.7
QL08p048095 Quercus lobata HOM05D002523 ORTHO05D002951 3.0e-06 55.5 67 43.3
CiPaw.01G086100 Carya illinoinensis HOM05D002523 ORTHO05D002951 6.7e-06 54.3 67 41.8
Manes.05G005400 Manihot esculenta HOM05D002523 ORTHO05D002951 8.7e-06 53.9 69 43.5
Potri.014G108200 Populus trichocarpa HOM05D002523 ORTHO05D002951 8.7e-06 53.9 68 44.1
Sabra14G0079700 Salix brachista HOM05D002523 ORTHO05D002951 8.7e-06 53.9 68 42.6


User provided reference genes

Program Settings