Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p59530 Brassica napus HOM05D003546 ORTHO05D027045 1.1e-195 686.4 345 100.0
BolC4t27459H Brassica oleracea HOM05D003546 ORTHO05D027045 3.2e-150 535.4 345 83.5
C07p60450 Brassica napus HOM05D003546 ORTHO05D027045 5.5e-118 428.3 220 95.5
BcaC02g08004 Brassica carinata HOM05D003546 ORTHO05D027045 3.8e-42 176.4 87 100.0
Thhalv10007918m.g Eutrema salsugineum HOM05D003546 ORTHO05D005667 2.9e-34 150.2 188 49.5
Sp1g15310 Schrenkiella parvula HOM05D003546 ORTHO05D005667 6.4e-34 149.1 189 48.7
Aa31LG7G2010 Aethionema arabicum HOM05D003546 ORTHO05D005667 1.6e-32 144.4 189 45.5
AL1G29390 Arabidopsis lyrata HOM05D003546 ORTHO05D005667 7.9e-32 142.1 188 48.4
AT1G17160 Arabidopsis thaliana HOM05D003546 ORTHO05D005667 7.9e-32 142.1 188 47.9
BcaB07g34045 Brassica carinata HOM05D003546 ORTHO05D005667 1.0e-31 141.7 191 47.1
CARHR017740 Cardamine hirsuta HOM05D003546 ORTHO05D005667 1.3e-31 141.4 188 47.9
Carub.0001s1691 Capsella rubella HOM05D003546 ORTHO05D005667 1.5e-30 137.9 188 46.8
BcaC07g41403 Brassica carinata HOM05D003546 ORTHO05D005667 1.4e-28 131.3 188 44.1
THA.LOC104813974 Tarenaya hassleriana HOM05D003546 ORTHO05D005667 5.3e-28 129.4 188 43.6
THA.LOC104812287 Tarenaya hassleriana HOM05D003546 ORTHO05D005667 1.5e-27 127.9 188 44.1
Actinidia12611 Actinidia chinensis HOM05D003546 ORTHO05D005667 3.4e-27 126.7 189 42.3
A06p13070 Brassica napus HOM05D003546 ORTHO05D005667 1.4e-25 121.3 188 43.1
BolC5t30265H Brassica oleracea HOM05D003546 ORTHO05D005667 3.5e-24 116.7 188 40.4
Cpa.g.sc77.106 Carica papaya HOM05D003546 ORTHO05D005667 4.6e-24 116.3 189 39.2
BraA06t24467Z Brassica rapa HOM05D003546 ORTHO05D005667 1.0e-23 115.2 188 41.0
DCAR_021047 Daucus carota HOM05D003546 ORTHO05D005667 1.0e-23 115.2 188 39.4
C05p15580 Brassica napus HOM05D003546 ORTHO05D005667 1.8e-23 114.4 188 41.5
Sc03g0010770 Simmondsia chinensis HOM05D003546 ORTHO05D005667 3.9e-23 113.2 188 37.8
BcaC05g25661 Brassica carinata HOM05D003546 ORTHO05D005667 5.1e-23 112.8 188 42.0
ClCG07G010350 Citrullus lanatus HOM05D003546 ORTHO05D005667 3.3e-22 110.2 188 37.8
Dinv26695 Davidia involucrata HOM05D003546 ORTHO05D005667 4.3e-22 109.8 188 38.8
CiPaw.11G154600 Carya illinoinensis HOM05D003546 ORTHO05D005667 5.6e-22 109.4 188 38.3
Sabra11G0100300 Salix brachista HOM05D003546 ORTHO05D005667 5.6e-22 109.4 189 38.1
MSTRG.6697 Avicennia marina HOM05D003546 ORTHO05D005667 7.4e-22 109.0 189 37.6
MELO3C016138.2 Cucumis melo HOM05D003546 ORTHO05D005667 7.4e-22 109.0 188 38.3
Hma1.2p1_0713F.1_g207830 Hydrangea macrophylla HOM05D003546 ORTHO05D005667 7.4e-22 109.0 188 38.3
Lsat_1_v5_gn_7_100340 Lactuca sativa HOM05D003546 ORTHO05D005667 1.3e-21 108.2 188 38.3
QL08p024489 Quercus lobata HOM05D003546 ORTHO05D005667 1.3e-21 108.2 188 36.7
CsaV3_4G007980 Cucumis sativus L. HOM05D003546 ORTHO05D005667 2.1e-21 107.5 188 37.8
TAR629G0142 Trochodendron aralioides HOM05D003546 ORTHO05D005667 2.1e-21 107.5 188 37.8
vmacro11984 Vaccinium macrocarpon HOM05D003546 ORTHO05D005667 2.1e-21 107.5 188 36.7
Ah.06g187600 Amaranthus hybridus HOM05D000137 ORTHO05D000503 2.8e-21 107.1 188 37.2
Migut.G00787 Erythranthe guttata HOM05D003546 ORTHO05D005667 3.7e-21 106.7 189 38.1
Rhsim06G0212800 Rhododendron simsii HOM05D003546 ORTHO05D005667 3.7e-21 106.7 188 36.2
Ciclev10020632m.g Citrus clementina HOM05D003546 ORTHO05D005667 6.2e-21 105.9 190 36.8
Lj8A144T67 Lonicera japonica HOM05D003546 ORTHO05D005667 6.2e-21 105.9 186 38.7
PSO541G1993 Papaver somniferum HOM05D003546 ORTHO05D005667 8.2e-21 105.5 188 38.3
Cfa019500 Carpinus fangiana HOM05D003546 ORTHO05D005667 1.8e-20 104.4 188 36.7
Medtr2g072830 Medicago truncatula HOM05D003546 ORTHO05D005667 1.8e-20 104.4 188 35.6
SGA_v2.0_scaffold73G24377 Striga asiatica HOM05D003546 ORTHO05D005667 1.8e-20 104.4 188 36.7
ECA236G3331 Erigeron canadensis HOM05D003546 ORTHO05D005667 2.4e-20 104.0 189 40.2
Eucgr.F03224 Eucalyptus grandis HOM05D003546 ORTHO05D005667 2.4e-20 104.0 188 37.2
FvH4_3g17420 Fragaria vesca HOM05D003546 ORTHO05D005667 2.4e-20 104.0 188 35.6
FAN11G2746 Fragaria x ananassa HOM05D003546 ORTHO05D005667 2.4e-20 104.0 188 35.6
FAN16G1735 Fragaria x ananassa HOM05D003546 ORTHO05D005667 2.4e-20 104.0 188 35.6
Manes.15G101700 Manihot esculenta HOM05D003546 ORTHO05D005667 2.4e-20 104.0 188 36.7
TWI38G2125 Tripterygium wilfordii HOM05D003546 ORTHO05D005667 2.4e-20 104.0 188 38.3
Lalb_Chr25g0285581 Lupinus albus HOM05D003546 ORTHO05D005667 3.1e-20 103.6 188 37.8
Nn3g20902 Nelumbo nucifera HOM05D003546 ORTHO05D005667 3.1e-20 103.6 188 37.8
Rhsim06G0213200 Rhododendron simsii HOM05D003546 ORTHO05D005667 3.1e-20 103.6 188 35.6
A09p60550 Brassica napus HOM05D003546 ORTHO05D005667 4.0e-20 103.2 115 50.4
BraA09t41425Z Brassica rapa HOM05D003546 ORTHO05D005667 4.0e-20 103.2 115 50.4
Ca_03453_v3 Cicer arietinum L. HOM05D003546 ORTHO05D005667 4.0e-20 103.2 188 36.2
HanXRQChr15g0495341 Helianthus annuus HOM05D003546 ORTHO05D005667 4.0e-20 103.2 188 38.8
Nitab4.5_0003618g0070 Nicotiana tabacum HOM05D003546 ORTHO05D005667 4.0e-20 103.2 189 37.6
Gohir.A08G234000 Gossypium hirsutum HOM05D003546 ORTHO05D005667 5.3e-20 102.8 189 37.6
Gohir.D08G254200 Gossypium hirsutum HOM05D003546 ORTHO05D005667 5.3e-20 102.8 189 37.6
Gorai.004G271100 Gossypium raimondii HOM05D003546 ORTHO05D005667 5.3e-20 102.8 189 37.6
PSO675G0773 Papaver somniferum HOM05D003546 ORTHO05D005667 5.3e-20 102.8 188 37.8
TAR627G0069 Trochodendron aralioides HOM05D003546 ORTHO05D005667 5.3e-20 102.8 188 36.7
CANSAT56G3227 Cannabis sativa HOM05D003546 ORTHO05D005667 6.9e-20 102.4 188 36.7
FAN21G0932 Fragaria x ananassa HOM05D003546 ORTHO05D005667 6.9e-20 102.4 188 35.6
SalBow8G3953 Salvia bowleyana HOM05D003546 ORTHO05D005667 6.9e-20 102.4 188 34.6
Hund10394 Selenicereus undatus HOM05D003546 ORTHO05D005667 6.9e-20 102.4 188 35.6
unitig_37.g12553 Utricularia gibba HOM05D003546 ORTHO05D005667 9.0e-20 102.1 188 35.6
Aqoxy1G01847 Aquilegia oxysepala HOM05D003546 ORTHO05D005667 1.2e-19 101.7 188 37.2
Peaxi162Scf00111g01221 Petunia axillaris HOM05D003546 ORTHO05D005667 1.5e-19 101.3 188 37.2
COL.COLO4_17394 Corchorus olitorius HOM05D003546 ORTHO05D005667 2.0e-19 100.9 190 37.4
Oeu010039.1 Olea europaea HOM05D003546 ORTHO05D005667 2.6e-19 100.5 188 35.6
TPR.G27299 Trifolium pratense HOM05D003546 ORTHO05D005667 2.6e-19 100.5 188 34.6
Nitab4.5_0001140g0050 Nicotiana tabacum HOM05D003546 ORTHO05D005667 3.4e-19 100.1 188 36.7
Psat1g007800 Pisum sativum HOM05D003546 ORTHO05D005667 3.4e-19 100.1 188 34.6
ATR0256G001 Amborella trichopoda HOM05D003546 ORTHO05D005667 4.5e-19 99.8 189 34.4
MD11G1273100 Malus domestica HOM05D003546 ORTHO05D005667 5.8e-19 99.4 188 36.7
Thecc.07G148500 Theobroma cacao HOM05D003546 ORTHO05D005667 5.8e-19 99.4 189 37.0
Atru.chr2.1822 Acer truncatum HOM05D003546 ORTHO05D005667 7.6e-19 99.0 188 34.6
Lj3g0000931 Lotus japonicus HOM05D003546 ORTHO05D005667 1.0e-18 98.6 188 34.0
Potri.011G114100 Populus trichocarpa HOM05D003546 ORTHO05D005667 1.3e-18 98.2 188 35.6
AUR62013937 Chenopodium quinoa HOM05D003546 ORTHO05D005667 1.7e-18 97.8 186 36.0
Os01g0665400 Oryza sativa ssp. japonica HOM05D003546 ORTHO05D005667 2.2e-18 97.4 189 34.4
Prupe.4G154400 Prunus persica HOM05D003546 ORTHO05D005667 2.2e-18 97.4 188 35.6
CAN.G375.59 Capsicum annuum HOM05D003546 ORTHO05D005667 2.9e-18 97.1 188 35.1
Sed0015060 Sechium edule HOM05D003546 ORTHO05D005667 2.9e-18 97.1 188 34.0
HPP92_024629 Vanilla planifolia HOM05D003546 ORTHO05D005667 2.9e-18 97.1 188 36.7
RcHm_v2.0_Chr5g0028951 Rosa chinensis HOM05D003546 ORTHO05D005667 3.8e-18 96.7 188 34.0
Zm00001eb359730 Zea mays HOM05D003546 ORTHO05D005667 3.8e-18 96.7 189 32.3
arahy.Tifrunner.gnm1.ann1.T44SL9 Arachis hypogaea HOM05D003546 ORTHO05D005667 8.4e-18 95.5 188 36.2
arahy.Tifrunner.gnm1.ann1.UIE2A5 Arachis hypogaea HOM05D003546 ORTHO05D005667 1.1e-17 95.1 189 36.0
BcaC03g14396 Brassica carinata HOM05D003546 ORTHO05D005667 1.1e-17 95.1 102 54.9
BolC2t07938H Brassica oleracea HOM05D003546 ORTHO05D005667 1.1e-17 95.1 102 54.9
VMungo1080G1435 Vigna mungo HOM05D003546 ORTHO05D005667 1.1e-17 95.1 188 34.6
C02p18050 Brassica napus HOM05D003546 ORTHO05D005667 1.9e-17 94.4 102 54.9
CSS0041975 Camellia sinensis var. sinensis HOM05D003546 ORTHO05D005667 2.5e-17 94.0 171 35.1
Glyma.15G240800 Glycine max HOM05D003546 ORTHO05D005667 2.5e-17 94.0 188 34.0
Glyma.13G263300 Glycine max HOM05D003546 ORTHO05D005667 4.2e-17 93.2 188 33.5
GSVIVG01014076001 Vitis vinifera HOM05D003546 ORTHO05D005667 4.2e-17 93.2 115 46.1
arahy.Tifrunner.gnm1.ann1.Y31H1M Arachis hypogaea HOM05D003546 ORTHO05D005667 7.1e-17 92.4 188 35.6
Duzib213G0800 Durio zibethinus HOM05D003546 ORTHO05D005667 7.1e-17 92.4 190 35.3
C04p41100 Brassica napus HOM05D003546 ORTHO05D014122 2.1e-16 90.9 79 63.3
CDE02G3780 Ceratophyllum demersum HOM05D003546 ORTHO05D005667 2.1e-16 90.9 189 34.9
PGR031G2804 Punica granatum HOM05D003546 ORTHO05D005667 2.1e-16 90.9 190 35.3
Glyma.13G263400 Glycine max HOM05D003546 ORTHO05D005667 3.5e-16 90.1 188 32.4
Sopen07g030330 Solanum pennellii HOM05D003546 ORTHO05D005667 7.9e-16 89.0 188 33.0
Phvul.005G070000 Phaseolus vulgaris HOM05D003546 ORTHO05D005667 1.3e-15 88.2 188 33.0
PGSC0003DMG400007057 Solanum tuberosum HOM05D003546 ORTHO05D005667 1.3e-15 88.2 188 33.5
Aqoxy4G00144 Aquilegia oxysepala HOM05D003546 ORTHO05D005667 2.3e-15 87.4 201 32.3
Solyc07g062070.3 Solanum lycopersicum HOM05D003546 ORTHO05D005667 6.7e-15 85.9 188 32.4
Cc05_g10570 Coffea canephora HOM05D003546 ORTHO05D005667 1.5e-14 84.7 115 42.6
BcaC01g00338 Brassica carinata HOM05D003546 ORTHO05D005667 2.5e-14 84.0 110 47.3
SHI19235 Sapria himalayana HOM05D003546 ORTHO05D005667 5.7e-14 82.8 189 32.8
Phvul.005G070200 Phaseolus vulgaris HOM05D003546 ORTHO05D005667 4.8e-13 79.7 188 31.9
VMungo1080G0318 Vigna mungo HOM05D003546 ORTHO05D005667 4.8e-13 79.7 187 31.6
C03p78600 Brassica napus HOM05D003546 ORTHO05D005667 6.3e-13 79.3 110 45.5
C02p16330 Brassica napus HOM05D003546 ORTHO05D005667 1.5e-11 74.7 117 40.2
arahy.Tifrunner.gnm1.ann1.FE4UN0 Arachis hypogaea HOM05D003546 ORTHO05D005667 1.0e-10 72.0 50 66.0
AagrBONN_evm.TU.Sc2ySwM_344.5210 Anthoceros agrestis HOM05D003546 ORTHO05D005667 2.2e-10 70.9 199 27.1
Mapoly0014s0091 Marchantia polymorpha HOM05D003546 ORTHO05D005667 2.2e-10 70.9 193 28.5
SMO163G0088 Selaginella moellendorffii HOM05D003546 ORTHO05D005667 1.1e-09 68.6 191 27.7
Pp3c5_14610 Physcomitrium patens HOM05D000518 ORTHO05D005667 1.4e-09 68.2 193 26.9
AUR62019675 Chenopodium quinoa HOM05D003546 ORTHO05D005667 4.2e-09 66.6 50 60.0
BolC8t47746H Brassica oleracea HOM05D003546 ORTHO05D033167 5.5e-09 66.2 48 66.7
BcaB05g23518 Brassica carinata HOM05D003546 ORTHO05D014122 7.2e-09 65.9 78 48.7
BraA01t01463Z Brassica rapa HOM05D003546 ORTHO05D033167 7.2e-09 65.9 47 66.0
BcaC07g37423 Brassica carinata HOM05D009375 ORTHO05D090521 1.6e-08 64.7 52 61.5
C08p09000 Brassica napus HOM05D003546 ORTHO05D033167 2.7e-08 63.9 48 64.6
Haze_08456 Corylus avellana HOM05D003546 ORTHO05D005667 3.6e-08 63.5 97 41.2
Dinv13351 Davidia involucrata HOM05D003546 ORTHO05D005667 3.6e-08 63.5 128 35.9
Oeu058446.1 Olea europaea HOM05D003546 ORTHO05D005667 3.6e-08 63.5 105 38.1
Pp3c6_13210 Physcomitrium patens HOM05D003546 ORTHO05D005667 4.6e-08 63.2 189 25.9
Haze_08457 Corylus avellana HOM05D003546 ORTHO05D005667 6.1e-08 62.8 52 51.9
A01p26360 Brassica napus HOM05D003546 ORTHO05D014122 1.0e-07 62.0 64 56.2
BraA01t02562Z Brassica rapa HOM05D003546 ORTHO05D014122 1.0e-07 62.0 64 56.2
Sed0005020 Sechium edule HOM05D003546 ORTHO05D005667 1.0e-07 62.0 97 41.2
BcaC03g14253 Brassica carinata HOM05D003546 ORTHO05D005667 3.0e-07 60.5 84 45.2
BcaC02g08580 Brassica carinata HOM05D003546 ORTHO05D014122 6.7e-07 59.3 64 54.7
C05p52660 Brassica napus HOM05D003546 ORTHO05D014122 6.7e-07 59.3 64 54.7
BolC4t26808H Brassica oleracea HOM05D003546 ORTHO05D014122 6.7e-07 59.3 64 54.7
BolC8t52242H Brassica oleracea HOM05D003546 ORTHO05D014122 6.7e-07 59.3 64 54.7
C04p52320 Brassica napus HOM05D003546 ORTHO05D014122 1.5e-06 58.2 64 53.1
arahy.Tifrunner.gnm1.ann1.JM4QTS Arachis hypogaea HOM05D003546 ORTHO05D005667 1.9e-06 57.8 56 50.0
BcaC07g41321 Brassica carinata HOM05D003546 ORTHO05D005667 3.3e-06 57.0 46 58.7
C03p54870 Brassica napus HOM05D003546 ORTHO05D005667 3.3e-06 57.0 46 58.7
BolC2t07734H Brassica oleracea HOM05D003546 ORTHO05D005667 3.3e-06 57.0 84 45.2
AUR62019676 Chenopodium quinoa HOM05D003546 ORTHO05D005667 9.7e-06 55.5 97 39.2


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