Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 1.7e-137 492.7 247 100.0
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 7.9e-127 457.2 247 95.5
A04p23050 Brassica napus HOM05D006271 ORTHO05D023853 3.5e-50 202.6 237 55.3
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 2.1e-34 150.2 209 48.8
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 2.3e-33 146.7 206 48.5
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 2.1e-31 140.2 214 47.2
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 3.6e-31 139.4 219 45.7
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 3.6e-31 139.4 207 46.4
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 3.6e-31 139.4 209 46.4
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 8.1e-31 138.3 213 46.9
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 1.4e-30 137.5 185 48.6
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 2.4e-30 136.7 213 46.5
BcaC02g08034 Brassica carinata HOM05D006271 ORTHO05D023853 2.4e-30 136.7 126 65.1
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 2.0e-29 133.7 209 45.5
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 4.5e-29 132.5 209 45.0
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 8.4e-28 128.3 218 43.6
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.5e-24 117.5 223 41.3
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 3.7e-23 112.8 206 43.2
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 3.8e-20 102.8 207 38.6
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 5.5e-19 99.0 198 41.4
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 3.5e-18 96.3 205 40.5
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 1.0e-17 94.7 208 38.9
BraA04t17838Z Brassica rapa HOM05D006271 ORTHO05D023853 3.0e-17 93.2 106 55.7
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.5e-16 90.9 207 37.7
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 2.5e-16 90.1 208 38.5
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 4.3e-16 89.4 201 36.3
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 7.4e-16 88.6 203 39.4
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 2.8e-15 86.7 206 37.4
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 2.8e-15 86.7 205 36.6
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 4.8e-15 85.9 208 36.1
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 4.8e-15 85.9 202 38.6
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 6.3e-15 85.5 203 36.9
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 8.2e-15 85.1 201 39.3
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 1.8e-14 84.0 203 36.0
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 2.4e-14 83.6 208 36.1
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 2.4e-14 83.6 230 36.1
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 1.2e-13 81.3 207 37.2
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 1.2e-13 81.3 204 38.2
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.2e-13 81.3 204 38.2
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.2e-13 81.3 204 38.2
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 1.2e-13 81.3 204 36.3
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.5e-13 80.9 205 33.2
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.5e-13 80.9 230 36.1
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 1.5e-13 80.9 203 35.5
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 2.0e-13 80.5 205 35.6
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 2.0e-13 80.5 205 33.2
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 2.6e-13 80.1 212 33.0
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 2.6e-13 80.1 213 38.5
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 3.4e-13 79.7 203 35.5
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.0e-12 78.2 214 34.6
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.3e-12 77.8 205 32.7
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 1.3e-12 77.8 201 37.8
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 1.7e-12 77.4 208 35.1
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 1.7e-12 77.4 212 31.1
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 3.8e-12 76.3 202 37.6
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 3.8e-12 76.3 199 34.7
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 1.1e-11 74.7 206 33.0
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 1.1e-11 74.7 225 34.7
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 2.5e-11 73.6 204 35.3
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 2.5e-11 73.6 196 31.1
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 3.2e-11 73.2 197 35.5
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 7.2e-11 72.0 205 34.1
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 7.2e-11 72.0 199 33.2
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 9.3e-11 71.6 249 28.1
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 1.2e-10 71.2 207 33.8
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 2.1e-10 70.5 204 34.3
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 2.1e-10 70.5 208 33.7
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 2.7e-10 70.1 207 32.9
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 3.5e-10 69.7 204 32.8
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 3.5e-10 69.7 206 34.0
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 4.6e-10 69.3 206 32.5
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 4.6e-10 69.3 199 32.7
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 6.1e-10 68.9 199 30.2
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 1.0e-09 68.2 204 32.4
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 1.8e-09 67.4 199 29.1
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 1.8e-09 67.4 206 34.5
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 2.3e-09 67.0 202 33.7
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 2.3e-09 67.0 225 32.4
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 2.3e-09 67.0 200 36.0
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 3.0e-09 66.6 200 32.0
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 3.0e-09 66.6 206 34.0
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 3.0e-09 66.6 201 33.3
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 3.9e-09 66.2 205 30.7
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 5.1e-09 65.9 204 28.4
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 8.7e-09 65.1 206 27.7
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 8.7e-09 65.1 199 29.6
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 8.7e-09 65.1 215 33.0
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 8.7e-09 65.1 213 33.3
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 1.5e-08 64.3 203 31.5
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 1.9e-08 63.9 208 34.6
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 2.5e-08 63.5 215 29.8
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 3.3e-08 63.2 204 30.4
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 3.3e-08 63.2 204 31.4
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 5.7e-08 62.4 203 28.1
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 7.4e-08 62.0 250 27.6
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 9.7e-08 61.6 231 30.7
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 9.7e-08 61.6 64 53.1
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 1.3e-07 61.2 196 31.6
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 1.3e-07 61.2 64 53.1
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 1.6e-07 60.8 206 32.5
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 2.8e-07 60.1 198 28.8
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 4.8e-07 59.3 199 29.6
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 4.8e-07 59.3 204 28.9
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 4.8e-07 59.3 203 29.1
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 6.3e-07 58.9 245 26.9
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 3.1e-06 56.6 135 35.6
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 5.3e-06 55.8 64 45.3


User provided reference genes

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