Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p58380 Brassica napus HOM05D001038 ORTHO05D010763 6.6e-122 440.7 214 100.0
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 2.0e-73 279.6 185 75.7
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 1.7e-72 276.6 182 72.5
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 1.0e-69 267.3 183 68.9
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 5.0e-69 265.0 187 69.5
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 5.5e-68 261.5 182 68.1
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 7.2e-68 261.2 183 68.3
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 9.7e-65 250.8 173 72.3
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 8.8e-58 227.6 130 83.8
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 8.8e-58 227.6 130 83.8
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 2.9e-53 212.6 182 56.6
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 2.4e-47 193.0 190 49.5
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 3.1e-47 192.6 183 49.2
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 7.7e-46 188.0 188 50.0
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 7.7e-46 188.0 188 50.0
BolC4t26248H Brassica oleracea HOM05D001038 ORTHO05D018589 1.9e-44 183.3 122 76.2
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.9e-44 183.3 189 46.6
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.2e-43 180.6 189 46.6
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-43 180.3 182 46.7
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 3.0e-42 176.0 184 47.3
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 5.7e-41 171.8 149 53.7
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 1.2e-35 154.1 176 42.0
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 4.7e-35 152.1 188 45.2
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 1.3e-32 144.1 182 40.1
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 1.7e-32 143.7 182 45.1
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 1.7e-32 143.7 182 45.6
BcaC08g44172 Brassica carinata HOM05D001038 ORTHO05D018589 3.7e-32 142.5 73 93.2
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 8.3e-32 141.4 199 36.7
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 5.4e-31 138.7 182 36.3
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-30 137.5 193 36.3
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-28 130.6 174 39.7
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 4.3e-28 129.0 200 36.5
C07p18290 Brassica napus HOM05D001038 ORTHO05D010763 1.6e-27 127.1 132 43.9
Thhalv10023964m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.6e-27 127.1 176 38.6
Thhalv10003408m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 4.7e-27 125.6 176 38.6
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 8.1e-27 124.8 177 36.7
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-26 124.0 176 38.1
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-26 124.0 177 37.3
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 1.8e-26 123.6 175 37.7
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.8e-26 123.6 188 34.6
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 3.1e-26 122.9 175 36.6
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 6.8e-26 121.7 177 35.6
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 6.8e-26 121.7 181 37.6
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 8.9e-26 121.3 176 37.5
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.5e-25 120.6 176 37.5
Thhalv10003372m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.0e-25 120.2 176 38.6
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 2.6e-25 119.8 175 37.7
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.4e-23 114.0 153 39.2
AT2G07240 Arabidopsis thaliana HOM05D001038 ORTHO05D010763 1.9e-23 113.6 177 36.2
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 1.9e-23 113.6 174 36.2
C09p31530 Brassica napus HOM05D020314 ORTHO05D032005 1.9e-23 113.6 176 37.5
BcaC08g45228 Brassica carinata HOM05D001038 ORTHO05D010946 2.4e-23 113.2 179 35.8
C05p34670 Brassica napus HOM05D001038 ORTHO05D032287 2.4e-23 113.2 207 32.4
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 4.1e-23 112.5 177 33.9
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 4.1e-23 112.5 177 33.9
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 7.1e-23 111.7 126 42.9
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-22 110.5 163 35.0
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 1.6e-22 110.5 99 52.5
BcaC08g44171 Brassica carinata HOM05D007462 ORTHO05D002086 2.1e-22 110.2 61 91.8
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-22 110.2 179 35.2
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-22 109.8 174 32.8
BcaB08g34843 Brassica carinata HOM05D001038 ORTHO05D010946 2.7e-22 109.8 179 31.8
BraA04t17267Z Brassica rapa HOM05D001038 ORTHO05D014932 4.6e-22 109.0 177 32.2
Carub.0004s1123 Capsella rubella HOM05D001038 ORTHO05D000395 4.6e-22 109.0 176 35.2
BolC7t41410H Brassica oleracea HOM05D001038 ORTHO05D010763 1.0e-21 107.8 175 33.7
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-21 107.5 174 32.8
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-21 107.1 174 33.3
BolC2t09973H Brassica oleracea HOM05D001038 ORTHO05D021697 3.0e-21 106.3 182 34.6
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 3.9e-21 105.9 125 42.4
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 3.9e-21 105.9 159 35.8
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 5.1e-21 105.5 128 45.3
BcaB04g17277 Brassica carinata HOM05D001038 ORTHO05D014932 6.6e-21 105.1 176 30.7
BolC2t07874H Brassica oleracea HOM05D001038 ORTHO05D010946 6.6e-21 105.1 183 33.3
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 6.6e-21 105.1 156 36.5
BcaB02g10757 Brassica carinata HOM05D007462 ORTHO05D002086 8.6e-21 104.8 61 83.6
BcaC03g14544 Brassica carinata HOM05D001038 ORTHO05D010946 8.6e-21 104.8 175 33.1
C07p09720 Brassica napus HOM05D001038 ORTHO05D010763 1.5e-20 104.0 175 33.1
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-20 103.6 175 34.3
Thhalv10023140m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.9e-20 103.6 153 35.3
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 2.5e-20 103.2 177 31.6
C06p00840 Brassica napus HOM05D001038 ORTHO05D010946 2.5e-20 103.2 175 32.6
BolC3t20322H Brassica oleracea HOM05D001038 ORTHO05D010946 2.5e-20 103.2 175 32.6
BcaC01g04978 Brassica carinata HOM05D001038 ORTHO05D010946 4.3e-20 102.4 180 33.3
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-20 102.4 175 34.3
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 4.3e-20 102.4 175 34.3
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 5.6e-20 102.1 131 39.7
BraA02t08689Z Brassica rapa HOM05D001038 ORTHO05D010763 5.6e-20 102.1 177 35.0
C02p39590 Brassica napus HOM05D001038 ORTHO05D021697 9.5e-20 101.3 182 33.5
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 9.5e-20 101.3 180 32.8
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 1.2e-19 100.9 179 34.1
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-19 100.1 174 29.9
C07p30940 Brassica napus HOM05D001038 ORTHO05D014932 2.8e-19 99.8 174 29.3
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 3.6e-19 99.4 171 35.1
C05p36210 Brassica napus HOM05D001038 ORTHO05D017560 8.1e-19 98.2 171 35.1
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 8.1e-19 98.2 177 31.6
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-18 97.8 177 32.2
BolC5t31712H Brassica oleracea HOM05D001038 ORTHO05D032287 1.1e-18 97.8 123 38.2
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 1.4e-18 97.4 106 44.3
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 4.0e-18 95.9 176 29.0
BolC5t32344H Brassica oleracea HOM05D001038 ORTHO05D017560 4.0e-18 95.9 171 34.5
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 4.0e-18 95.9 176 29.0
BolC3t14874H Brassica oleracea HOM05D001038 ORTHO05D010763 8.9e-18 94.7 128 39.1
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-17 94.4 133 34.6
Thhalv10015447m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 1.2e-17 94.4 183 29.5
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-17 93.6 140 32.9
BraA06t25408Z Brassica rapa HOM05D001038 ORTHO05D010763 2.0e-17 93.6 99 44.4
C02p45450 Brassica napus HOM05D001038 ORTHO05D017560 2.6e-17 93.2 175 29.7
C03p31470 Brassica napus HOM05D001038 ORTHO05D010946 2.6e-17 93.2 180 32.2
C05p38700 Brassica napus HOM05D037879 ORTHO05D027353 2.6e-17 93.2 171 29.2
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 5.8e-17 92.0 174 28.2
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-16 90.5 176 31.2
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 1.7e-16 90.5 174 28.2
AL5G24460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 4.9e-16 89.0 193 29.5
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 8.4e-16 88.2 141 35.5
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-15 87.8 175 28.6
AL2G29150 Arabidopsis lyrata HOM05D020011 ORTHO05D021433 1.9e-15 87.0 192 29.7
AL5G38970 Arabidopsis lyrata HOM05D020011 ORTHO05D021433 1.9e-15 87.0 192 29.7
C07p12200 Brassica napus HOM05D001038 ORTHO05D010763 1.9e-15 87.0 176 30.7
Thhalv10015415m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 1.9e-15 87.0 178 29.2
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-15 86.7 159 33.3
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 2.4e-15 86.7 176 30.7
A05p28250 Brassica napus HOM05D001038 ORTHO05D019929 3.2e-15 86.3 176 30.1
BraA05t21706Z Brassica rapa HOM05D001038 ORTHO05D019929 3.2e-15 86.3 176 30.1
BraA06t25316Z Brassica rapa HOM05D001038 ORTHO05D010763 3.2e-15 86.3 85 47.1
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 1.2e-14 84.3 177 31.1
A02p12560 Brassica napus HOM05D001038 ORTHO05D019929 2.7e-14 83.2 175 28.6
A04p08430 Brassica napus HOM05D001038 ORTHO05D010946 2.7e-14 83.2 180 29.4
C07p21850 Brassica napus HOM05D001038 ORTHO05D019929 2.7e-14 83.2 176 29.5
BcaB08g35416 Brassica carinata HOM05D001038 ORTHO05D017560 3.5e-14 82.8 176 29.5
Thhalv10003093m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 3.5e-14 82.8 202 30.2
BcaB04g19444 Brassica carinata HOM05D001038 ORTHO05D010763 4.6e-14 82.4 62 58.1
BolC7t42339H Brassica oleracea HOM05D001038 ORTHO05D010763 6.0e-14 82.0 63 55.6
BcaB06g28131 Brassica carinata HOM05D001038 ORTHO05D000395 7.8e-14 81.6 153 30.7
A04p11350 Brassica napus HOM05D001038 ORTHO05D033175 7.8e-14 81.6 104 36.5
BraA04t16797Z Brassica rapa HOM05D001038 ORTHO05D033175 7.8e-14 81.6 104 36.5
CARHR120350 Cardamine hirsuta HOM05D001038 ORTHO05D010763 1.7e-13 80.5 103 38.8
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 2.3e-13 80.1 116 36.2
BcaC07g37457 Brassica carinata HOM05D001038 ORTHO05D010763 3.0e-13 79.7 174 31.0
Sp4g09840 Schrenkiella parvula HOM05D001038 ORTHO05D010763 8.6e-13 78.2 78 44.9
AL3G41000 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 1.1e-12 77.8 193 26.9
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-12 77.8 127 32.3
AL6G49460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 1.5e-12 77.4 193 27.5
BcaB03g16061 Brassica carinata HOM05D001038 ORTHO05D000395 3.3e-12 76.3 128 32.8
BcaC01g03929 Brassica carinata HOM05D001038 ORTHO05D010946 3.3e-12 76.3 173 28.3
BolC2t11143H Brassica oleracea HOM05D001038 ORTHO05D024385 3.3e-12 76.3 176 29.5
BcaB02g10814 Brassica carinata HOM05D001038 ORTHO05D010946 9.6e-12 74.7 162 29.0
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 3.6e-11 72.8 112 33.9
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 4.7e-11 72.4 106 33.0
C09p39680 Brassica napus HOM05D001038 ORTHO05D010763 4.7e-11 72.4 106 33.0
Thhalv10001261m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 4.0e-10 69.3 186 29.0
BcaB06g27083 Brassica carinata HOM05D001038 ORTHO05D010763 5.2e-10 68.9 74 44.6
BcaB01g02416 Brassica carinata HOM05D011654 ORTHO05D010946 1.2e-09 67.8 107 32.7
BraA08t32953Z Brassica rapa HOM05D001038 ORTHO05D014932 2.6e-09 66.6 94 37.2
BcaB08g36238 Brassica carinata HOM05D011654 ORTHO05D010946 5.8e-09 65.5 106 34.0
BraA05t21067Z Brassica rapa HOM05D001038 ORTHO05D017560 7.6e-09 65.1 104 36.5
C08p05940 Brassica napus HOM05D001038 ORTHO05D024385 1.3e-08 64.3 74 40.5
BcaC02g07854 Brassica carinata HOM05D001038 ORTHO05D090554 1.7e-08 63.9 44 68.2
BcaB06g28199 Brassica carinata HOM05D001038 ORTHO05D010946 2.9e-08 63.2 179 25.1
BolC6t38916H Brassica oleracea HOM05D001038 ORTHO05D010763 6.4e-08 62.0 55 49.1
BcaC09g48751 Brassica carinata HOM05D001038 ORTHO05D032762 1.9e-07 60.5 48 58.3
BcaB08g34624 Brassica carinata HOM05D001038 ORTHO05D010763 2.4e-07 60.1 73 41.1
C09p26140 Brassica napus HOM05D001038 ORTHO05D010763 4.2e-07 59.3 58 44.8
BraA04t16531Z Brassica rapa HOM05D001038 ORTHO05D010946 5.4e-07 58.9 85 34.1
BcaB01g01614 Brassica carinata HOM05D001038 ORTHO05D014932 7.1e-07 58.5 129 24.8
AL8G20830 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 1.2e-06 57.8 115 27.8
C01p28010 Brassica napus HOM05D004375 ORTHO05D008558 1.2e-06 57.8 103 29.1
BcaC03g16183 Brassica carinata HOM05D001038 ORTHO05D021697 1.6e-06 57.4 45 60.0
BolC6t36761H Brassica oleracea HOM05D001038 ORTHO05D103931 1.6e-06 57.4 31 83.9
BcaB01g01507 Brassica carinata HOM05D011654 ORTHO05D010946 4.6e-06 55.8 89 32.6
C08p05930 Brassica napus HOM05D001038 ORTHO05D010763 6.0e-06 55.5 58 43.1
BraA01t02230Z Brassica rapa HOM05D001038 ORTHO05D000395 7.8e-06 55.1 80 40.0


User provided reference genes

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