Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p51610 Brassica napus HOM05D006409 ORTHO05D008250 1.3e-74 283.1 157 100.0
BcaC02g08700 Brassica carinata HOM05D006409 ORTHO05D008250 1.9e-70 269.2 156 96.2
BcaC02g08698 Brassica carinata HOM05D006409 ORTHO05D008250 3.4e-67 258.5 156 92.9
BcaC02g08699 Brassica carinata HOM05D006409 ORTHO05D008250 2.7e-64 248.8 135 100.0
C03p03950 Brassica napus HOM05D006409 ORTHO05D008250 7.4e-62 240.7 156 87.8
BolC3t12932H Brassica oleracea HOM05D006409 ORTHO05D008250 7.4e-62 240.7 156 87.8
BcaB01g05645 Brassica carinata HOM05D006409 ORTHO05D008250 1.3e-61 240.0 156 87.2
C04p51620 Brassica napus HOM05D006409 ORTHO05D008250 6.1e-56 221.1 156 84.6
Sp6g35060 Schrenkiella parvula HOM05D006409 ORTHO05D008250 1.0e-55 220.3 156 80.1
BolC9t59643H Brassica oleracea HOM05D006409 ORTHO05D008250 1.8e-55 219.5 156 78.2
BcaC06g32511 Brassica carinata HOM05D001913 ORTHO05D008250 1.9e-54 216.1 156 75.6
A03p03510 Brassica napus HOM05D006409 ORTHO05D008250 2.2e-53 212.6 156 80.8
BraA03t09701Z Brassica rapa HOM05D006409 ORTHO05D008250 2.2e-53 212.6 156 80.8
BraA10t44915Z Brassica rapa HOM05D001913 ORTHO05D006405 3.8e-50 201.8 156 73.1
AT5G07890 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 8.5e-50 200.7 156 71.2
C09p68980 Brassica napus HOM05D006409 ORTHO05D006405 3.0e-47 192.2 158 70.3
A10p28660 Brassica napus HOM05D006409 ORTHO05D008250 3.9e-47 191.8 156 69.2
BcaNung06903 Brassica carinata HOM05D006409 ORTHO05D008250 9.7e-46 187.2 137 75.9
CARHR205310 Cardamine hirsuta HOM05D006409 ORTHO05D008250 1.8e-44 183.0 156 69.2
AL6G18220 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 6.9e-44 181.0 156 67.3
Thhalv10013673m.g Eutrema salsugineum HOM05D006409 ORTHO05D008250 6.9e-44 181.0 156 67.3
Carub.0006s0678 Capsella rubella HOM05D006409 ORTHO05D008250 8.5e-42 174.1 156 65.4
Carub.0008s2186 Capsella rubella HOM05D006409 ORTHO05D008250 1.9e-33 146.4 155 55.5
AL8G37860 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 6.5e-26 121.3 155 49.0
THA.LOC104818336 Tarenaya hassleriana HOM05D006409 ORTHO05D008250 3.2e-25 119.0 135 49.6
Ciclev10020474m.g Citrus clementina HOM05D006409 ORTHO05D008250 2.2e-13 79.7 160 36.9
TAR629G2567 Trochodendron aralioides HOM05D006409 ORTHO05D008250 2.2e-13 79.7 161 38.5
Sabra15G0078400 Salix brachista HOM05D006409 ORTHO05D008250 2.8e-13 79.3 155 40.0
AT5G61200 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 6.3e-13 78.2 131 42.0
vmacro17591 Vaccinium macrocarpon HOM05D006409 ORTHO05D008250 4.1e-12 75.5 159 35.8
CANSAT80G1113 Cannabis sativa HOM05D006409 ORTHO05D008250 5.4e-12 75.1 164 35.4
BcaC06g33174 Brassica carinata HOM05D001456 ORTHO05D014991 1.2e-11 73.9 117 41.0
Cpa.g.sc94.9 Carica papaya HOM05D006409 ORTHO05D008250 1.2e-11 73.9 161 36.6
Thecc.03G097200 Theobroma cacao HOM05D006409 ORTHO05D008250 2.7e-11 72.8 153 38.6
C04p51600 Brassica napus HOM05D006409 ORTHO05D008250 1.0e-10 70.9 41 97.6
Thhalv10003670m.g Eutrema salsugineum HOM05D001456 ORTHO05D014991 1.0e-10 70.9 112 42.0
Potri.015G048900 Populus trichocarpa HOM05D006409 ORTHO05D008250 1.0e-10 70.9 141 38.3
arahy.Tifrunner.gnm1.ann1.PS4SMH Arachis hypogaea HOM05D006409 ORTHO05D008250 2.3e-10 69.7 165 37.6
Nn4g23374 Nelumbo nucifera HOM05D006409 ORTHO05D008250 5.0e-10 68.6 164 38.4
Nitab4.5_0005160g0050 Nicotiana tabacum HOM05D006409 ORTHO05D008250 5.0e-10 68.6 161 37.3
Nitab4.5_0001961g0070 Nicotiana tabacum HOM05D006409 ORTHO05D008250 6.6e-10 68.2 164 37.2
Peaxi162Scf00106g00081 Petunia axillaris HOM05D006409 ORTHO05D008250 8.6e-10 67.8 154 37.7
AT5G61190 Arabidopsis thaliana HOM05D001456 ORTHO05D002799 1.5e-09 67.0 110 41.8
arahy.Tifrunner.gnm1.ann1.4D2E4C Arachis hypogaea HOM05D006409 ORTHO05D008250 1.9e-09 66.6 165 36.4
MD14G1208800 Malus domestica HOM05D006409 ORTHO05D008250 4.3e-09 65.5 160 35.6
PGR083G0341 Punica granatum HOM05D006409 ORTHO05D008250 1.2e-08 63.9 159 34.0
AL8G37850 Arabidopsis lyrata HOM05D001456 ORTHO05D002799 2.1e-08 63.2 124 39.5
A03p46820 Brassica napus HOM05D001456 ORTHO05D014991 2.1e-08 63.2 99 43.4
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 2.8e-08 62.8 157 36.3
Phvul.L001604 Phaseolus vulgaris HOM05D006409 ORTHO05D008250 2.8e-08 62.8 162 35.2
Lj4g0024886 Lotus japonicus HOM05D006409 ORTHO05D008250 8.0e-08 61.2 160 35.6
A03p46830 Brassica napus HOM05D001456 ORTHO05D014991 1.4e-07 60.5 74 48.6
C07p44880 Brassica napus HOM05D001456 ORTHO05D014991 1.4e-07 60.5 99 43.4
CARHR274940 Cardamine hirsuta HOM05D001456 ORTHO05D014991 1.8e-07 60.1 153 35.9
Haze_07680 Corylus avellana HOM05D006409 ORTHO05D008250 1.8e-07 60.1 142 33.1
CAN.G172.10 Capsicum annuum HOM05D006409 ORTHO05D008250 2.3e-07 59.7 162 33.3
Atru.chr9.377 Acer truncatum HOM05D006409 ORTHO05D008250 4.0e-07 58.9 140 30.0
Carub.0008s2185 Capsella rubella HOM05D001456 ORTHO05D002799 4.0e-07 58.9 105 39.0
Lalb_Chr13g0302951 Lupinus albus HOM05D006409 ORTHO05D008250 5.2e-07 58.5 160 33.8
PSO302G0195 Papaver somniferum HOM05D006409 ORTHO05D008250 5.2e-07 58.5 155 36.8
PGSC0003DMG400012806 Solanum tuberosum HOM05D006409 ORTHO05D008250 8.9e-07 57.8 170 34.1
BolC7t45011H Brassica oleracea HOM05D001456 ORTHO05D014991 1.5e-06 57.0 109 39.4
Cfa019299 Carpinus fangiana HOM05D006409 ORTHO05D008250 1.5e-06 57.0 139 32.4
Sopen12g016610 Solanum pennellii HOM05D006409 ORTHO05D008250 1.5e-06 57.0 158 36.1
Actinidia09250 Actinidia chinensis HOM05D006409 ORTHO05D008250 2.0e-06 56.6 160 33.1
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 2.0e-06 56.6 139 35.3
Solyc12g036300.3 Solanum lycopersicum HOM05D006409 ORTHO05D008250 2.6e-06 56.2 158 36.7
SalBow5G3762 Salvia bowleyana HOM05D006409 ORTHO05D008250 3.4e-06 55.8 156 32.1
VMungo1215G3198 Vigna mungo HOM05D006409 ORTHO05D008250 3.4e-06 55.8 162 35.2
MSTRG.22971 Avicennia marina HOM05D006409 ORTHO05D008250 4.4e-06 55.5 159 30.2
GSVIVG01007923001 Vitis vinifera HOM05D006409 ORTHO05D008250 5.8e-06 55.1 142 32.4
Eucgr.B00571 Eucalyptus grandis HOM05D006409 ORTHO05D008250 7.5e-06 54.7 133 33.8
Glyma.05G022800 Glycine max HOM05D006409 ORTHO05D008250 9.8e-06 54.3 160 35.6
Medtr4g109330 Medicago truncatula HOM05D006409 ORTHO05D008250 9.8e-06 54.3 166 32.5


User provided reference genes

Program Settings