Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 5.6e-264 913.7 450 100.0
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 5.6e-264 913.7 450 100.0
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 2.1e-242 842.0 454 93.8
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 6.7e-241 837.0 451 92.7
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 3.9e-233 811.2 450 90.4
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 3.0e-209 731.9 496 77.8
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 6.7e-209 730.7 492 77.2
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 4.4e-208 728.0 485 79.0
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 5.3e-206 721.1 483 77.6
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 5.9e-205 717.6 489 76.7
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 1.5e-203 713.0 479 78.5
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 8.3e-183 644.0 499 66.7
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 1.1e-182 643.7 473 70.0
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 3.4e-176 622.1 479 65.3
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 5.4e-174 614.8 501 63.3
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 6.6e-172 607.8 478 64.0
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 1.4e-169 600.1 479 63.5
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.8e-169 599.7 478 63.4
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.8e-169 599.7 478 63.8
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 1.2e-168 597.0 478 63.6
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 1.3e-167 593.6 491 61.5
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 1.7e-167 593.2 486 62.1
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 1.4e-166 590.1 491 61.7
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 1.9e-166 589.7 495 61.6
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 2.1e-165 586.3 495 60.8
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 2.7e-165 585.9 499 59.9
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 3.9e-164 582.0 493 60.0
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.1e-163 580.5 499 61.1
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 1.9e-163 579.7 458 63.8
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 3.3e-163 578.9 499 60.1
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 3.3e-163 578.9 489 61.6
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 3.6e-162 575.5 494 59.7
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 3.6e-162 575.5 494 58.7
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 4.7e-162 575.1 499 59.7
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 8.1e-162 574.3 478 61.5
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 8.1e-162 574.3 490 60.6
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 1.4e-161 573.5 497 60.4
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 2.4e-161 572.8 483 60.2
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 1.2e-160 570.5 488 59.6
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 1.2e-160 570.5 497 58.4
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 2.6e-160 569.3 484 59.3
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 1.3e-159 567.0 459 62.1
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 1.7e-159 566.6 491 59.7
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 1.7e-159 566.6 495 59.0
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 1.7e-159 566.6 489 59.1
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 6.4e-159 564.7 489 58.9
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 2.4e-158 562.8 494 58.7
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 1.6e-157 560.1 453 62.7
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 2.7e-157 559.3 510 57.6
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 6.0e-157 558.1 474 59.9
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 7.8e-157 557.8 468 60.7
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 2.3e-156 556.2 479 58.2
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 5.1e-156 555.1 477 60.4
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 5.1e-156 555.1 474 59.9
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 2.5e-155 552.7 477 58.7
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 3.3e-155 552.4 494 57.3
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 1.2e-154 550.4 484 57.4
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 4.7e-154 548.5 516 56.6
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 4.7e-154 548.5 537 55.9
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 4.0e-153 545.4 495 57.6
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 1.2e-152 543.9 490 56.1
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 5.8e-152 541.6 491 56.0
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 7.6e-152 541.2 477 57.4
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 9.9e-152 540.8 491 56.4
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 1.7e-151 540.0 473 57.7
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 8.4e-151 537.7 470 59.8
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.1e-150 537.3 489 56.9
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 9.3e-150 534.3 527 54.6
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 3.5e-149 532.3 494 55.1
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 6.0e-149 531.6 469 58.2
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 1.0e-148 530.8 484 57.2
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 1.3e-146 523.9 462 59.7
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 6.2e-146 521.5 447 59.7
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 8.1e-146 521.2 501 54.7
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 8.1e-146 521.2 446 60.5
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 1.1e-145 520.8 488 55.1
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 1.8e-145 520.0 504 54.6
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 1.8e-145 520.0 490 56.1
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 5.3e-145 518.5 452 59.3
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 9.0e-145 517.7 477 56.6
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 1.5e-144 516.9 457 58.6
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 2.0e-144 516.5 519 51.8
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 2.6e-144 516.2 461 60.3
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 2.2e-143 513.1 448 58.9
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 8.4e-143 511.1 501 55.9
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 1.9e-142 510.0 461 58.1
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 3.2e-142 509.2 415 61.7
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 1.0e-140 504.2 450 57.1
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 3.9e-140 502.3 502 54.6
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 2.1e-138 496.5 484 54.5
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 1.4e-137 493.8 490 53.5
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 4.0e-137 492.3 475 54.5
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 5.3e-137 491.9 450 57.6
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 2.5e-134 483.0 502 50.0
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 1.8e-129 466.8 488 57.4
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 9.3e-126 454.5 518 48.1
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 2.1e-125 453.4 516 48.3
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 3.5e-125 452.6 461 52.9
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 3.1e-121 439.5 387 57.9
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 6.9e-121 438.3 433 54.3
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 4.3e-115 419.1 567 42.3
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 2.4e-113 413.3 452 51.8
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 6.5e-111 405.2 550 42.4
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.4e-105 387.5 315 62.2
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 3.2e-102 376.3 438 47.5
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 4.5e-96 355.9 354 55.1
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.5e-94 350.9 414 47.1
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.8e-89 334.0 316 56.0
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 5.3e-89 332.4 269 61.3
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 4.1e-73 279.6 251 57.8
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 9.2e-65 251.9 292 45.9
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 1.9e-57 227.6 381 35.4
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 3.2e-57 226.9 142 73.9
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 2.9e-50 203.8 286 45.1
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 1.3e-39 168.3 191 45.0
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 1.3e-39 168.3 343 31.8
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 2.1e-32 144.4 114 63.2
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 8.7e-31 139.0 97 68.0
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 1.8e-23 114.8 121 52.1
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 5.3e-20 103.2 78 66.7
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.0e-18 99.0 141 40.4
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 5.0e-10 70.1 116 39.7


User provided reference genes

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