Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p50190 Brassica napus HOM05D030935 ORTHO05D028274 5.9e-43 177.2 93 100.0
BolC4t26618H Brassica oleracea HOM05D030935 ORTHO05D028274 5.0e-42 174.1 93 97.8
C02p17130 Brassica napus HOM05D030935 ORTHO05D028274 1.9e-41 172.2 93 96.8
BolC2t07813H Brassica oleracea HOM05D030935 ORTHO05D028274 1.9e-41 172.2 93 96.8
THA.LOC104809239 Tarenaya hassleriana HOM05D003391 ORTHO05D005563 6.9e-07 57.4 41 82.9
BcaB02g11154 Brassica carinata HOM05D003391 ORTHO05D005563 9.0e-07 57.0 41 82.9
BcaC01g01234 Brassica carinata HOM05D003391 ORTHO05D005563 9.0e-07 57.0 41 82.9
BcaC05g27411 Brassica carinata HOM05D003391 ORTHO05D005563 9.0e-07 57.0 41 82.9
A05p20100 Brassica napus HOM05D003391 ORTHO05D005563 9.0e-07 57.0 41 82.9
C05p33590 Brassica napus HOM05D003391 ORTHO05D005563 9.0e-07 57.0 41 82.9
BolC5t32086H Brassica oleracea HOM05D003391 ORTHO05D005563 9.0e-07 57.0 41 82.9
BraA05t20918Z Brassica rapa HOM05D003391 ORTHO05D005563 9.0e-07 57.0 41 82.9
Sp1g37350 Schrenkiella parvula HOM05D003391 ORTHO05D005563 9.0e-07 57.0 41 82.9
C03p89680 Brassica napus HOM05D003391 ORTHO05D005563 4.4e-06 54.7 41 80.5
AL1G58160 Arabidopsis lyrata HOM05D003391 ORTHO05D005563 7.6e-06 53.9 41 78.0
AT1G50500 Arabidopsis thaliana HOM05D003391 ORTHO05D005563 7.6e-06 53.9 41 78.0
Carub.0001s3957 Capsella rubella HOM05D003391 ORTHO05D005563 9.9e-06 53.5 41 78.0


User provided reference genes

Program Settings