Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 9.1e-87 323.6 164 100.0
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 1.0e-74 283.5 145 98.6
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 3.0e-74 282.0 145 97.9
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 6.7e-74 280.8 145 97.2
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 4.4e-73 278.1 145 95.9
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 5.7e-73 277.7 145 95.2
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 9.7e-73 276.9 145 94.5
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 9.7e-73 276.9 145 95.9
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 3.7e-72 275.0 145 94.5
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 3.7e-72 275.0 145 95.2
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 6.3e-72 274.2 145 93.8
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 8.2e-72 273.9 145 93.1
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 8.2e-72 273.9 145 94.5
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 4.1e-71 271.6 145 93.8
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 2.0e-70 269.2 145 91.0
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.3e-69 266.5 145 91.7
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 2.2e-69 265.8 145 91.0
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 8.5e-69 263.8 145 90.3
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 8.5e-69 263.8 145 90.3
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 8.5e-69 263.8 145 90.3
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 8.5e-69 263.8 145 90.3
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 8.5e-69 263.8 145 90.3
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.0e-66 256.9 145 87.6
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 9.7e-65 250.4 145 86.2
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.8e-64 248.8 145 86.2
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 8.2e-64 247.3 145 84.1
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 2.4e-63 245.7 146 84.9
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 5.3e-63 244.6 145 84.8
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 7.0e-63 244.2 145 84.1
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 7.7e-62 240.7 145 82.8
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 2.2e-61 239.2 145 82.8
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 2.2e-61 239.2 145 82.8
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 3.8e-61 238.4 143 82.5
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 3.8e-61 238.4 143 82.5
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 3.8e-61 238.4 145 82.8
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 5.0e-61 238.0 158 77.8
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 3.2e-60 235.3 145 80.7
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 3.2e-60 235.3 145 82.1
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 4.2e-60 235.0 145 82.8
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 5.5e-60 234.6 146 82.2
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 7.2e-60 234.2 134 85.8
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 7.2e-60 234.2 145 80.0
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 9.4e-60 233.8 145 80.7
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 9.4e-60 233.8 143 81.8
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 9.4e-60 233.8 145 81.4
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 9.4e-60 233.8 146 81.5
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 1.2e-59 233.4 143 81.8
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 1.6e-59 233.0 145 81.4
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.6e-59 233.0 145 81.4
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 2.1e-59 232.6 147 80.3
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 2.1e-59 232.6 145 81.4
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 2.7e-59 232.3 143 80.4
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 4.7e-59 231.5 145 80.7
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 6.1e-59 231.1 132 86.4
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 8.0e-59 230.7 147 79.6
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 1.8e-58 229.6 146 79.5
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 2.3e-58 229.2 145 81.4
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 2.3e-58 229.2 147 78.9
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 2.3e-58 229.2 145 81.4
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 3.0e-58 228.8 143 80.4
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 6.8e-58 227.6 132 84.8
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 6.8e-58 227.6 145 81.4
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 6.8e-58 227.6 146 80.1
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 2.0e-57 226.1 145 78.6
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.6e-57 225.7 146 79.5
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 2.6e-57 225.7 146 79.5
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 2.6e-57 225.7 142 79.6
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 3.4e-57 225.3 146 79.5
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 3.4e-57 225.3 146 77.4
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.4e-57 225.3 146 79.5
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.4e-57 225.3 142 81.0
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 5.7e-57 224.6 146 80.8
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 5.7e-57 224.6 147 79.6
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 5.7e-57 224.6 146 80.1
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 7.5e-57 224.2 144 79.9
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 7.5e-57 224.2 145 81.4
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 2.2e-56 222.6 130 85.4
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 2.8e-56 222.2 145 77.9
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 3.7e-56 221.9 145 78.6
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 4.8e-56 221.5 130 84.6
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 1.2e-54 216.9 147 77.6
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 1.6e-54 216.5 147 77.6
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 2.7e-54 215.7 145 77.9
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 5.9e-54 214.5 147 77.6
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.3e-53 213.4 145 76.6
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 1.7e-53 213.0 147 76.2
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 2.3e-53 212.6 146 76.7
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 2.3e-53 212.6 143 78.3
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 2.9e-53 212.2 145 75.9
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 3.8e-53 211.8 147 76.2
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 3.8e-53 211.8 147 76.2
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 5.0e-53 211.5 146 76.7
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 5.0e-53 211.5 147 78.2
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 6.5e-53 211.1 145 75.2
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 8.6e-53 210.7 147 76.9
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 1.5e-52 209.9 145 75.2
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.5e-52 209.9 147 76.9
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 1.9e-52 209.5 123 82.1
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.9e-52 209.5 147 76.9
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 1.9e-52 209.5 145 77.2
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 3.3e-52 208.8 146 77.4
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 9.5e-52 207.2 146 78.1
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 9.5e-52 207.2 146 78.1
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 1.2e-51 206.8 136 80.9
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 1.2e-51 206.8 146 76.0
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 2.1e-51 206.1 147 76.2
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 3.6e-51 205.3 147 73.5
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 4.7e-51 204.9 146 74.7
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 6.1e-51 204.5 146 76.7
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 8.0e-51 204.1 143 76.2
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 1.0e-50 203.8 201 58.2
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 2.3e-50 202.6 147 74.1
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 3.0e-50 202.2 145 73.8
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 3.0e-50 202.2 149 72.5
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 4.0e-50 201.8 144 75.0
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 1.2e-49 200.3 128 81.2
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.2e-49 200.3 146 72.6
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 1.2e-49 200.3 146 72.6
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.5e-49 199.9 133 80.5
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 3.4e-49 198.7 147 72.8
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 1.3e-48 196.8 146 74.7
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 1.3e-48 196.8 146 74.7
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 1.3e-48 196.8 146 74.7
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 1.7e-48 196.4 144 73.6
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.7e-48 196.4 146 71.9
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 3.7e-48 195.3 148 71.6
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 8.3e-48 194.1 148 69.6
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 1.1e-47 193.7 148 71.6
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 1.1e-47 193.7 145 73.8
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 3.1e-47 192.2 145 71.7
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.6e-46 189.9 151 69.5
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 3.5e-46 188.7 146 69.2
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 1.3e-45 186.8 160 64.4
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 1.3e-45 186.8 168 62.5
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 1.7e-45 186.4 183 60.7
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 2.3e-45 186.0 121 81.8
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 4.3e-44 181.8 142 70.4
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 5.6e-44 181.4 150 67.3
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 1.2e-43 180.3 143 69.9
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 2.8e-43 179.1 145 70.3
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 1.0e-42 177.2 152 65.8
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 1.4e-42 176.8 145 68.3
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 1.5e-41 173.3 146 67.8
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 2.6e-41 172.6 145 65.5
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 9.8e-41 170.6 133 72.2
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 2.2e-40 169.5 95 86.3
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.9e-40 169.1 133 69.2
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 8.3e-40 167.5 137 71.5
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.1e-39 167.2 111 78.4
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 4.1e-39 165.2 141 67.4
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 7.0e-39 164.5 124 75.0
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 2.7e-38 162.5 123 75.6
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 4.6e-38 161.8 145 63.4
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 1.0e-37 160.6 132 65.9
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 1.3e-37 160.2 91 84.6
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 8.6e-37 157.5 115 76.5
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 2.5e-36 156.0 125 70.4
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 5.8e-33 144.8 123 66.7
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 2.2e-32 142.9 98 75.5
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 1.1e-31 140.6 104 75.0
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 1.4e-31 140.2 99 75.8
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.2e-30 137.1 144 54.2
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 1.2e-30 137.1 82 78.0
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 3.0e-29 132.5 133 58.6
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 6.6e-29 131.3 133 55.6
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 2.0e-25 119.8 107 68.2
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 4.4e-25 118.6 101 69.3
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 5.8e-25 118.2 69 79.7
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.7e-24 116.7 64 85.9
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 6.4e-24 114.8 120 57.5
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 6.4e-24 114.8 120 57.5
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 1.4e-23 113.6 131 53.4
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 1.9e-23 113.2 136 51.5
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 1.9e-23 113.2 80 73.8
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.2e-23 112.5 146 50.7
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 1.2e-22 110.5 76 75.0
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 1.2e-22 110.5 77 74.0
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 2.1e-19 99.8 98 57.1
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 4.7e-19 98.6 81 65.4
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 9.9e-17 90.9 45 88.9
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 1.0e-13 80.9 76 63.2
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.6e-09 66.2 35 94.3
AagrBONN_evm.TU.Sc2ySwM_362.1258 Anthoceros agrestis HOM05D003818 ORTHO05D004541 5.4e-07 58.5 101 45.5


User provided reference genes

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