Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p44820 Brassica napus HOM05D002743 ORTHO05D002895 1.5e-74 282.7 136 100.0
BolC4t26059H Brassica oleracea HOM05D002743 ORTHO05D002895 1.1e-53 213.4 104 99.0
BcaC02g09623 Brassica carinata HOM05D002743 ORTHO05D002895 2.0e-47 192.6 95 98.9
BcaC03g17512 Brassica carinata HOM05D002743 ORTHO05D002895 3.7e-41 171.8 104 78.8
C02p54750 Brassica napus HOM05D002743 ORTHO05D002895 3.7e-41 171.8 104 78.8
BolC2t11536H Brassica oleracea HOM05D002743 ORTHO05D002895 3.7e-41 171.8 104 78.8
BraA02t08585Z Brassica rapa HOM05D002743 ORTHO05D002895 6.2e-41 171.0 104 78.8
BraA02t08589Z Brassica rapa HOM05D002743 ORTHO05D002895 6.2e-41 171.0 104 78.8
A02p35850 Brassica napus HOM05D002743 ORTHO05D002895 1.2e-39 166.8 104 77.9
AT3G28330 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 2.4e-37 159.1 105 73.3
Carub.0005s0683 Capsella rubella HOM05D002743 ORTHO05D002895 6.0e-36 154.5 107 72.9
AL5G17850 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 6.7e-35 151.0 106 70.8
A02p35880 Brassica napus HOM05D002743 ORTHO05D002895 1.8e-32 142.9 77 85.7
AL5G17830 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 3.3e-18 95.5 103 48.5
AT3G28280 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 5.7e-18 94.7 112 48.2
Thhalv10000704m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 5.7e-18 94.7 104 49.0
BcaC02g09624 Brassica carinata HOM05D002743 ORTHO05D002895 1.3e-17 93.6 114 47.4
BcaC04g23796 Brassica carinata HOM05D002743 ORTHO05D002895 1.3e-17 93.6 117 46.2
BolC4t26061H Brassica oleracea HOM05D002743 ORTHO05D002895 1.3e-17 93.6 114 47.4
SpUn0003_0080 Schrenkiella parvula HOM05D002743 ORTHO05D002895 2.2e-17 92.8 131 41.2
C09p04580 Brassica napus HOM05D002743 ORTHO05D002895 3.7e-17 92.0 111 45.9
BraA09t36068Z Brassica rapa HOM05D002743 ORTHO05D002895 3.7e-17 92.0 117 44.4
CARHR292690 Cardamine hirsuta HOM05D002743 ORTHO05D002895 6.3e-17 91.3 105 48.6
Thhalv10022100m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 1.4e-16 90.1 114 43.0
AL3G39690 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.8e-16 89.7 107 47.7
BraA07t28566Z Brassica rapa HOM05D002743 ORTHO05D002895 1.8e-16 89.7 114 45.6
BcaC06g36618 Brassica carinata HOM05D002743 ORTHO05D002895 2.4e-16 89.4 115 49.6
BcaC06g36619 Brassica carinata HOM05D002743 ORTHO05D002895 2.4e-16 89.4 115 49.6
BcaC06g35723 Brassica carinata HOM05D002743 ORTHO05D002895 3.1e-16 89.0 114 45.6
A07p07740 Brassica napus HOM05D002743 ORTHO05D002895 3.1e-16 89.0 114 45.6
C04p44830 Brassica napus HOM05D002743 ORTHO05D002895 3.1e-16 89.0 113 46.0
BolC7t41637H Brassica oleracea HOM05D002743 ORTHO05D002895 3.1e-16 89.0 114 45.6
A09p04310 Brassica napus HOM05D002743 ORTHO05D002895 6.9e-16 87.8 117 43.6
C07p02110 Brassica napus HOM05D002743 ORTHO05D002895 1.5e-15 86.7 115 47.8
BcaC04g23797 Brassica carinata HOM05D002743 ORTHO05D002895 2.0e-15 86.3 112 42.0
C07p11650 Brassica napus HOM05D002743 ORTHO05D002895 2.0e-15 86.3 114 44.7
CARHR149600 Cardamine hirsuta HOM05D002743 ORTHO05D002895 3.4e-15 85.5 107 46.7
Carub.0004s2674 Capsella rubella HOM05D002743 ORTHO05D002895 5.9e-15 84.7 108 45.4
A04p11100 Brassica napus HOM05D002743 ORTHO05D002895 1.0e-14 84.0 114 44.7
Carub.0005s0675 Capsella rubella HOM05D002743 ORTHO05D002895 1.3e-14 83.6 106 45.3
BraA04t16772Z Brassica rapa HOM05D002743 ORTHO05D002895 2.2e-14 82.8 114 43.9
BcaC04g23794 Brassica carinata HOM05D002743 ORTHO05D002895 3.8e-14 82.0 109 43.1
Carub.0008s0568 Capsella rubella HOM05D002743 ORTHO05D002895 5.0e-14 81.6 100 45.0
AL133U10030 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 6.5e-14 81.3 97 49.5
AT3G48220 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 8.5e-14 80.9 99 46.5
C09p04610 Brassica napus HOM05D002743 ORTHO05D002895 1.1e-13 80.5 109 42.2
BolC9t53389H Brassica oleracea HOM05D002743 ORTHO05D002895 1.1e-13 80.5 109 42.2
AL5G17810 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.4e-13 80.1 107 43.0
AL3G39670 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.9e-13 79.7 97 48.5
Thhalv10009727m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 2.5e-13 79.3 105 41.9
Carub.0005s0676 Capsella rubella HOM05D002743 ORTHO05D002895 4.2e-13 78.6 103 40.8
BraA03t14493Z Brassica rapa HOM05D002743 ORTHO05D002895 5.5e-13 78.2 113 42.5
A03p54310 Brassica napus HOM05D002743 ORTHO05D002895 7.2e-13 77.8 113 42.5
A02p35860 Brassica napus HOM05D002743 ORTHO05D002895 6.1e-12 74.7 111 39.6
BcaNung01438 Brassica carinata HOM05D002743 ORTHO05D002895 3.0e-11 72.4 102 44.1
BolC7t45770H Brassica oleracea HOM05D002743 ORTHO05D002895 3.0e-11 72.4 102 44.1
BcaB06g27161 Brassica carinata HOM05D002743 ORTHO05D002895 5.1e-11 71.6 108 41.7
A02p35840 Brassica napus HOM05D002743 ORTHO05D002895 6.7e-11 71.2 79 43.0
BraA02t08588Z Brassica rapa HOM05D002743 ORTHO05D002895 8.8e-11 70.9 79 43.0
AL8G22310 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.6e-10 69.3 101 45.5
BcaB03g16763 Brassica carinata HOM05D002743 ORTHO05D002895 4.4e-10 68.6 86 46.5
BcaB06g27159 Brassica carinata HOM05D002743 ORTHO05D002895 1.3e-09 67.0 54 64.8
AL34U10080 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.7e-09 66.6 101 40.6
AL8G22320 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 1.7e-09 66.6 101 40.6
THA.LOC104823978 Tarenaya hassleriana HOM05D002743 ORTHO05D002895 2.2e-09 66.2 127 40.2
THA.LOC104824016 Tarenaya hassleriana HOM05D002743 ORTHO05D002895 2.2e-09 66.2 122 39.3
AT3G28223 Arabidopsis thaliana HOM05D002743 ORTHO05D002895 3.7e-09 65.5 106 37.7
BolC9t53387H Brassica oleracea HOM05D002743 ORTHO05D002895 1.1e-08 63.9 108 36.1
AL4G45790 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.0e-07 59.7 78 46.2
CARHR286050 Cardamine hirsuta HOM05D002743 ORTHO05D002895 5.9e-07 58.2 104 39.4
Thhalv10028185m.g Eutrema salsugineum HOM05D002743 ORTHO05D002895 1.3e-06 57.0 71 46.5
Carub.0005s0673 Capsella rubella HOM05D002743 ORTHO05D002895 2.2e-06 56.2 114 33.3
AL5G16370 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 5.0e-06 55.1 101 39.6
CARHR286560 Cardamine hirsuta HOM05D002743 ORTHO05D002895 6.5e-06 54.7 131 33.6


User provided reference genes

Program Settings