Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p41080 Brassica napus HOM05D000727 ORTHO05D000541 1.3e-52 209.5 112 100.0
Aa31sc318G40 Aethionema arabicum HOM05D000727 ORTHO05D000541 3.7e-15 85.1 80 67.5
BcaC06g33012 Brassica carinata HOM05D000727 ORTHO05D000541 1.4e-14 83.2 72 68.1
BcaB01g00470 Brassica carinata HOM05D000727 ORTHO05D000541 4.5e-13 78.2 70 68.6
BcaC06g33358 Brassica carinata HOM05D000727 ORTHO05D000541 4.5e-13 78.2 70 70.0
C07p46650 Brassica napus HOM05D000727 ORTHO05D000541 4.5e-13 78.2 70 70.0
C08p27110 Brassica napus HOM05D000727 ORTHO05D000541 4.5e-13 78.2 70 68.6
BolC8t50324H Brassica oleracea HOM05D000727 ORTHO05D000541 4.5e-13 78.2 70 68.6
A03p48550 Brassica napus HOM05D000727 ORTHO05D000541 5.9e-13 77.8 70 70.0
A09p45000 Brassica napus HOM05D000727 ORTHO05D000541 1.0e-12 77.0 70 65.7
BcaC06g33014 Brassica carinata HOM05D000727 ORTHO05D000541 1.7e-12 76.3 72 66.7
BolC7t45180H Brassica oleracea HOM05D000727 ORTHO05D000541 1.7e-12 76.3 70 68.6
BraA03t13960Z Brassica rapa HOM05D000727 ORTHO05D000541 1.7e-12 76.3 70 68.6
BraA09t39960Z Brassica rapa HOM05D000727 ORTHO05D000541 2.9e-12 75.5 70 65.7
Cpa.g.sc11.167 Carica papaya HOM05D000727 ORTHO05D000541 1.1e-11 73.6 70 61.4
Sc22g0002460 Simmondsia chinensis HOM05D000727 ORTHO05D000541 1.9e-11 72.8 72 61.1
CSS0008683 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 5.5e-11 71.2 83 57.8
CSS0045349 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 5.5e-11 71.2 83 57.8
Dinv23097 Davidia involucrata HOM05D000727 ORTHO05D000541 1.6e-10 69.7 75 57.3
Eucgr.A00506 Eucalyptus grandis HOM05D000727 ORTHO05D000541 2.1e-10 69.3 70 60.0
Ciclev10012868m.g Citrus clementina HOM05D000727 ORTHO05D000541 3.6e-10 68.6 72 58.3
Atru.chr8.2229 Acer truncatum HOM05D000727 ORTHO05D000541 1.0e-09 67.0 82 59.8
TAR369G0911 Trochodendron aralioides HOM05D000727 ORTHO05D000541 1.4e-09 66.6 83 57.8
Actinidia05368 Actinidia chinensis HOM05D000727 ORTHO05D000541 2.3e-09 65.9 73 56.2
ECA247G2462 Erigeron canadensis HOM05D000727 ORTHO05D000541 2.3e-09 65.9 79 59.5
Gohir.D09G160300 Gossypium hirsutum HOM05D000727 ORTHO05D000541 2.3e-09 65.9 52 65.4
Gorai.006G181900 Gossypium raimondii HOM05D000727 ORTHO05D000541 2.3e-09 65.9 52 65.4
Lalb_Chr19g0124671 Lupinus albus HOM05D000727 ORTHO05D000541 2.3e-09 65.9 70 61.4
Sopen09g007460 Solanum pennellii HOM05D000727 ORTHO05D000541 3.0e-09 65.5 74 58.1
CSS0039608 Camellia sinensis var. sinensis HOM05D000727 ORTHO05D000541 4.0e-09 65.1 73 57.5
Potri.010G189900 Populus trichocarpa HOM05D000727 ORTHO05D000541 4.0e-09 65.1 75 53.3
TWI77G0823 Tripterygium wilfordii HOM05D000727 ORTHO05D000541 4.0e-09 65.1 70 61.4
ATR0618G150 Amborella trichopoda HOM05D000727 ORTHO05D000541 8.8e-09 63.9 73 52.1
Cfa017213 Carpinus fangiana HOM05D000727 ORTHO05D000541 8.8e-09 63.9 72 56.9
CDE03G0021 Ceratophyllum demersum HOM05D000727 ORTHO05D000541 8.8e-09 63.9 73 57.5
Solyc09g014620.3 Solanum lycopersicum HOM05D000727 ORTHO05D000541 8.8e-09 63.9 74 56.8
COL.COLO4_14544 Corchorus olitorius HOM05D000727 ORTHO05D000541 1.2e-08 63.5 69 55.1
Nn2g11467 Nelumbo nucifera HOM05D000727 ORTHO05D000541 1.2e-08 63.5 73 53.4
PGSC0003DMG400008501 Solanum tuberosum HOM05D000727 ORTHO05D000541 1.2e-08 63.5 74 56.8
CDE04G3528 Ceratophyllum demersum HOM05D000727 ORTHO05D000541 1.5e-08 63.2 73 57.5
MELO3C003298.2 Cucumis melo HOM05D000727 ORTHO05D000541 1.5e-08 63.2 73 54.8
Gohir.A01G227700 Gossypium hirsutum HOM05D000727 ORTHO05D000541 1.5e-08 63.2 70 55.7
Gohir.D01G217500 Gossypium hirsutum HOM05D000727 ORTHO05D000541 1.5e-08 63.2 70 55.7
Gorai.002G263800 Gossypium raimondii HOM05D000727 ORTHO05D000541 1.5e-08 63.2 70 55.7
Haze_20996 Corylus avellana HOM05D000727 ORTHO05D000541 2.0e-08 62.8 88 48.9
Oeu033594.1 Olea europaea HOM05D000727 ORTHO05D000541 2.0e-08 62.8 71 57.7
Nn2g13692 Nelumbo nucifera HOM05D000727 ORTHO05D000541 2.6e-08 62.4 73 53.4
PSO339G3526 Papaver somniferum HOM05D000727 ORTHO05D000541 2.6e-08 62.4 70 55.7
CsaV3_4G026240 Cucumis sativus L. HOM05D000727 ORTHO05D000541 3.4e-08 62.0 73 54.8
Duzib093G2247 Durio zibethinus HOM05D000727 ORTHO05D000541 3.4e-08 62.0 71 54.9
Lsat_1_v5_gn_9_34101 Lactuca sativa HOM05D000727 ORTHO05D000541 3.4e-08 62.0 85 51.8
Aqoxy2G00915 Aquilegia oxysepala HOM05D000727 ORTHO05D000541 4.4e-08 61.6 85 49.4
CANSAT35G0903 Cannabis sativa HOM05D000727 ORTHO05D000541 4.4e-08 61.6 76 52.6
Oeu063406.1 Olea europaea HOM05D000727 ORTHO05D000541 4.4e-08 61.6 71 54.9
Sed0014872 Sechium edule HOM05D000727 ORTHO05D000541 4.4e-08 61.6 72 55.6
TWI53G1408 Tripterygium wilfordii HOM05D000727 ORTHO05D000541 4.4e-08 61.6 71 57.7
Thecc.05G017100 Theobroma cacao HOM05D000727 ORTHO05D000541 5.7e-08 61.2 70 52.9
Cc06_g01450 Coffea canephora HOM05D000727 ORTHO05D000541 9.8e-08 60.5 74 54.1
TAR623G0383 Trochodendron aralioides HOM05D000727 ORTHO05D000541 9.8e-08 60.5 73 54.8
GSVIVG01032840001 Vitis vinifera HOM05D000727 ORTHO05D000541 9.8e-08 60.5 75 49.3
arahy.Tifrunner.gnm1.ann1.J62Q7G Arachis hypogaea HOM05D000727 ORTHO05D000541 1.3e-07 60.1 70 57.1
CiPaw.10G156100 Carya illinoinensis HOM05D000727 ORTHO05D000541 1.3e-07 60.1 71 53.5
Lj2C76T27 Lonicera japonica HOM05D000727 ORTHO05D000541 2.8e-07 58.9 56 64.3
MBI14_g31687_MAGBIO Magnolia biondii HOM05D000727 ORTHO05D000541 2.8e-07 58.9 73 50.7
Potri.008G067400 Populus trichocarpa HOM05D000727 ORTHO05D000541 2.8e-07 58.9 73 50.7
GSVIVG01033966001 Vitis vinifera HOM05D000727 ORTHO05D000541 2.8e-07 58.9 73 52.1
Atru.chr12.22 Acer truncatum HOM05D000727 ORTHO05D000541 3.7e-07 58.5 74 54.1
SGA_v2.0_scaffold75G25017 Striga asiatica HOM05D000727 ORTHO05D000541 3.7e-07 58.5 71 49.3
unitig_749.g14170 Utricularia gibba HOM05D000727 ORTHO05D000541 3.7e-07 58.5 71 53.5
Ciclev10032930m.g Citrus clementina HOM05D000727 ORTHO05D000541 8.3e-07 57.4 75 48.0
Aqoxy4G02598 Aquilegia oxysepala HOM05D000727 ORTHO05D000541 1.1e-06 57.0 73 50.7
Lj3C954T14 Lonicera japonica HOM05D000727 ORTHO05D000541 1.1e-06 57.0 72 52.8
Sabra08G0049500 Salix brachista HOM05D000727 ORTHO05D000541 1.1e-06 57.0 73 49.3
ClCG04G007050 Citrullus lanatus HOM05D001221 ORTHO05D009285 1.4e-06 56.6 53 62.3
SGA_v2.0_scaffold85G26745 Striga asiatica HOM05D000727 ORTHO05D000541 1.4e-06 56.6 71 49.3
Thecc.10G020300 Theobroma cacao HOM05D000727 ORTHO05D000541 1.4e-06 56.6 51 64.7
COL.COLO4_25700 Corchorus olitorius HOM05D000727 ORTHO05D000541 1.8e-06 56.2 54 57.4
PSO801G0185 Papaver somniferum HOM05D000727 ORTHO05D000541 1.8e-06 56.2 72 51.4
CiPaw.01G297700 Carya illinoinensis HOM05D000727 ORTHO05D000541 2.4e-06 55.8 93 43.0
CiPaw.02G191800 Carya illinoinensis HOM05D000727 ORTHO05D000541 2.4e-06 55.8 76 52.6
FAN01G2349 Fragaria x ananassa HOM05D000727 ORTHO05D000541 2.4e-06 55.8 73 52.1
Prupe.6G276300 Prunus persica HOM05D000727 ORTHO05D000541 2.4e-06 55.8 73 53.4
SGA_v2.0_scaffold235G43686 Striga asiatica HOM05D000727 ORTHO05D000541 2.4e-06 55.8 51 56.9
Actinidia29106 Actinidia chinensis HOM05D000727 ORTHO05D000541 3.1e-06 55.5 73 50.7
BolC3t19218H Brassica oleracea HOM05D039486 ORTHO05D031985 3.1e-06 55.5 60 61.7
FvH4_7g24360 Fragaria vesca HOM05D000727 ORTHO05D000541 3.1e-06 55.5 73 52.1
TWI09G0481 Tripterygium wilfordii HOM05D000727 ORTHO05D000541 3.1e-06 55.5 69 49.3
TAR633G2673 Trochodendron aralioides HOM05D000727 ORTHO05D000541 3.1e-06 55.5 73 50.7
Manes.07G128600 Manihot esculenta HOM05D000727 ORTHO05D000541 4.1e-06 55.1 86 46.5
FvH4_6g11530 Fragaria vesca HOM05D000727 ORTHO05D000541 5.4e-06 54.7 71 50.7
FAN02G0049 Fragaria x ananassa HOM05D000727 ORTHO05D000541 5.4e-06 54.7 71 50.7
FAN05G0296 Fragaria x ananassa HOM05D000727 ORTHO05D000541 5.4e-06 54.7 71 50.7
FAN14G4982 Fragaria x ananassa HOM05D000727 ORTHO05D000541 5.4e-06 54.7 71 50.7
Lsat_1_v5_gn_8_100320 Lactuca sativa HOM05D000727 ORTHO05D000541 7.0e-06 54.3 69 53.6
RcHm_v2.0_Chr3g0463231 Rosa chinensis HOM05D000727 ORTHO05D000541 7.0e-06 54.3 72 51.4
Sp5g10390 Schrenkiella parvula HOM05D000727 ORTHO05D000541 7.0e-06 54.3 51 58.8
TAR636G2383 Trochodendron aralioides HOM05D000727 ORTHO05D000541 7.0e-06 54.3 73 49.3
MSTRG.24502 Avicennia marina HOM05D000727 ORTHO05D000541 9.1e-06 53.9 51 56.9
Haze_17217 Corylus avellana HOM05D000727 ORTHO05D000541 9.1e-06 53.9 80 47.5
Dinv17983 Davidia involucrata HOM05D000727 ORTHO05D000541 9.1e-06 53.9 75 52.0
Glyma.03G060200 Glycine max HOM05D000727 ORTHO05D000541 9.1e-06 53.9 81 49.4


User provided reference genes

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