Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09173 Brassica carinata HOM05D004374 ORTHO05D005430 4.2e-41 171.0 91 100.0
C04p39300 Brassica napus HOM05D004374 ORTHO05D005430 4.2e-41 171.0 91 100.0
BolC4t25497H Brassica oleracea HOM05D004374 ORTHO05D005430 4.2e-41 171.0 91 100.0
Thhalv10000991m.g Eutrema salsugineum HOM05D004374 ORTHO05D005430 1.4e-28 129.4 91 80.2
BcaB02g07796 Brassica carinata HOM05D004374 ORTHO05D005430 4.9e-26 120.9 91 76.9
Thhalv10010555m.g Eutrema salsugineum HOM05D004374 ORTHO05D005430 4.9e-26 120.9 91 75.8
AL5G21410 Arabidopsis lyrata HOM05D004374 ORTHO05D005430 6.5e-26 120.6 91 72.5
AL5G34180 Arabidopsis lyrata HOM05D004374 ORTHO05D005430 2.5e-25 118.6 91 71.4
BolC6t37295H Brassica oleracea HOM05D004374 ORTHO05D005430 1.2e-24 116.3 94 73.4
BraA07t29837Z Brassica rapa HOM05D004374 ORTHO05D005430 2.1e-24 115.5 96 71.9
C06p21110 Brassica napus HOM05D004374 ORTHO05D005430 3.5e-24 114.8 96 71.9
Carub.0005s1981 Capsella rubella HOM05D004374 ORTHO05D005430 3.5e-24 114.8 90 70.0
A07p21500 Brassica napus HOM05D004374 ORTHO05D005430 4.6e-24 114.4 96 70.8
AT3G53270 Arabidopsis thaliana HOM05D004374 ORTHO05D005430 8.7e-23 110.2 91 68.1
Sp1g13120 Schrenkiella parvula HOM05D004374 ORTHO05D005430 1.3e-21 106.3 91 71.4
Carub.0001s3232 Capsella rubella HOM05D004374 ORTHO05D005430 3.1e-20 101.7 91 67.0
CARHR163160 Cardamine hirsuta HOM05D004374 ORTHO05D005430 1.9e-14 82.4 91 57.1
Aa31LG9G14420 Aethionema arabicum HOM05D004374 ORTHO05D005430 4.1e-12 74.7 98 48.0
Sp5g09070 Schrenkiella parvula HOM05D004374 ORTHO05D005430 2.9e-10 68.6 53 73.6
Ciclev10032301m.g Citrus clementina HOM05D004374 ORTHO05D005430 9.4e-09 63.5 83 39.8
Cpa.g.sc46.39 Carica papaya HOM05D004374 ORTHO05D005430 2.1e-08 62.4 91 39.6
ClCG11G003340 Citrullus lanatus HOM05D004374 ORTHO05D005430 1.4e-07 59.7 94 39.4
Ciclev10002076m.g Citrus clementina HOM05D004374 ORTHO05D005430 3.9e-07 58.2 84 35.7
Atru.chr12.84 Acer truncatum HOM05D004374 ORTHO05D005430 5.1e-07 57.8 82 35.4
TWI34G1386 Tripterygium wilfordii HOM05D004374 ORTHO05D005430 8.8e-07 57.0 91 37.4
Ca_06940_v3 Cicer arietinum L. HOM05D004374 ORTHO05D005430 1.5e-06 56.2 82 41.5
CsaV3_2G003190 Cucumis sativus L. HOM05D002754 ORTHO05D003271 1.5e-06 56.2 94 39.4
TAR383G0672 Trochodendron aralioides HOM05D004374 ORTHO05D005430 2.0e-06 55.8 82 36.6
CSS0020843 Camellia sinensis var. sinensis HOM05D004374 ORTHO05D005430 2.6e-06 55.5 77 44.2
THA.LOC104826552 Tarenaya hassleriana HOM05D004374 ORTHO05D005430 2.6e-06 55.5 97 41.2
CANSAT11G1308 Cannabis sativa HOM05D004374 ORTHO05D005430 4.4e-06 54.7 98 41.8
Medtr4g115320 Medicago truncatula HOM05D004374 ORTHO05D005430 5.7e-06 54.3 72 40.3
Psat4g038960 Pisum sativum HOM05D004374 ORTHO05D005430 5.7e-06 54.3 63 44.4
Nn8g39541 Nelumbo nucifera HOM05D004374 ORTHO05D005430 7.4e-06 53.9 97 38.1
Nn8g39548 Nelumbo nucifera HOM05D004374 ORTHO05D005430 7.4e-06 53.9 97 38.1
Lalb_Chr12g0197301 Lupinus albus HOM05D004374 ORTHO05D005430 9.7e-06 53.5 86 39.5
Manes.06G047300 Manihot esculenta HOM05D004374 ORTHO05D005430 9.7e-06 53.5 93 33.3
Medtr3g113180 Medicago truncatula HOM05D004374 ORTHO05D005430 9.7e-06 53.5 72 40.3
Thecc.09G131900 Theobroma cacao HOM05D004374 ORTHO05D005430 9.7e-06 53.5 94 35.1


User provided reference genes

Program Settings