Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p37510 Brassica napus HOM05D001736 ORTHO05D021622 2.4e-90 335.5 173 100.0
BcaC02g09705 Brassica carinata HOM05D001736 ORTHO05D021622 2.9e-67 258.8 139 97.1
A09p27260 Brassica napus HOM05D001736 ORTHO05D017570 2.5e-58 229.2 183 73.8
C01p32290 Brassica napus HOM05D001736 ORTHO05D021622 5.0e-43 178.3 111 85.6
BolC1t03113H Brassica oleracea HOM05D001736 ORTHO05D021622 6.3e-38 161.4 100 85.0
BcaC09g49881 Brassica carinata HOM05D001736 ORTHO05D021622 2.4e-29 132.9 75 90.7
Sp1g23930 Schrenkiella parvula HOM05D001736 ORTHO05D002344 7.0e-29 131.3 97 76.3
Thhalv10008228m.g Eutrema salsugineum HOM05D001736 ORTHO05D002344 6.5e-27 124.8 97 73.2
BcaB07g33261 Brassica carinata HOM05D001736 ORTHO05D002344 1.5e-26 123.6 110 67.3
C02p34270 Brassica napus HOM05D001736 ORTHO05D021622 2.3e-24 116.3 113 62.8
BcaC01g01580 Brassica carinata HOM05D001736 ORTHO05D002344 4.4e-23 112.1 87 72.4
C03p74500 Brassica napus HOM05D001736 ORTHO05D002344 4.4e-23 112.1 87 72.4
BcaB03g13974 Brassica carinata HOM05D001736 ORTHO05D002344 1.7e-22 110.2 91 71.4
BolC3t19698H Brassica oleracea HOM05D001736 ORTHO05D002344 1.7e-22 110.2 87 72.4
BcaC01g06933 Brassica carinata HOM05D001736 ORTHO05D002344 4.8e-22 108.6 91 68.1
BcaC06g35311 Brassica carinata HOM05D001736 ORTHO05D002344 6.3e-22 108.2 84 73.8
A08p26090 Brassica napus HOM05D001736 ORTHO05D002344 6.3e-22 108.2 82 74.4
BolC7t42264H Brassica oleracea HOM05D001736 ORTHO05D002344 6.3e-22 108.2 84 73.8
BraA08t34561Z Brassica rapa HOM05D001736 ORTHO05D002344 1.8e-21 106.7 82 73.2
C07p17570 Brassica napus HOM05D001736 ORTHO05D002344 4.1e-21 105.5 84 72.6
AL1G41230 Arabidopsis lyrata HOM05D001736 ORTHO05D002344 3.5e-20 102.4 80 73.8
A07p11660 Brassica napus HOM05D001736 ORTHO05D002344 3.5e-20 102.4 86 70.9
CARHR027200 Cardamine hirsuta HOM05D001736 ORTHO05D002344 5.9e-20 101.7 96 66.7
AT1G27700 Arabidopsis thaliana HOM05D001736 ORTHO05D002344 1.0e-19 100.9 82 70.7
BraA07t28951Z Brassica rapa HOM05D001736 ORTHO05D002344 1.3e-19 100.5 86 69.8
Carub.0001s2621 Capsella rubella HOM05D001736 ORTHO05D002344 2.2e-19 99.8 94 66.0
THA.LOC104820507 Tarenaya hassleriana HOM05D001736 ORTHO05D002344 8.5e-19 97.8 97 58.8
BcaB07g32140 Brassica carinata HOM05D001736 ORTHO05D017570 2.1e-17 93.2 61 82.0
BolC5t34040H Brassica oleracea HOM05D001736 ORTHO05D017570 3.0e-16 89.4 62 79.0
BcaB02g10899 Brassica carinata HOM05D001736 ORTHO05D017570 9.8e-15 84.3 55 81.8
C05p53680 Brassica napus HOM05D001736 ORTHO05D017570 2.2e-14 83.2 58 79.3
C01p18240 Brassica napus HOM05D001736 ORTHO05D017570 6.3e-14 81.6 62 72.6
BcaC05g29132 Brassica carinata HOM05D001736 ORTHO05D017570 7.0e-13 78.2 54 77.8
BraA01t03449Z Brassica rapa HOM05D001736 ORTHO05D017570 5.9e-12 75.1 46 89.1
Ciclev10001640m.g Citrus clementina HOM05D001736 ORTHO05D002344 2.1e-09 66.6 104 46.2
CsaV3_2G026270 Cucumis sativus L. HOM05D001736 ORTHO05D002344 1.8e-08 63.5 117 39.3
MD15G1073000 Malus domestica HOM05D001736 ORTHO05D002344 2.3e-08 63.2 112 44.6
Lj4A68T47 Lonicera japonica HOM05D001736 ORTHO05D002344 3.0e-08 62.8 117 41.0
Thecc.08G092100 Theobroma cacao HOM05D001736 ORTHO05D002344 6.8e-08 61.6 111 41.4
ClCG08G016340 Citrullus lanatus HOM05D001736 ORTHO05D002344 1.2e-07 60.8 120 38.3
Nitab4.5_0000569g0110 Nicotiana tabacum HOM05D001736 ORTHO05D002344 1.2e-07 60.8 98 40.8
Atru.chr13.802 Acer truncatum HOM05D001736 ORTHO05D002344 1.5e-07 60.5 90 46.7
Duzib041G0439 Durio zibethinus HOM05D001736 ORTHO05D002344 2.0e-07 60.1 88 46.6
Gohir.A05G207800 Gossypium hirsutum HOM05D001736 ORTHO05D002344 2.0e-07 60.1 85 45.9
Gohir.D05G211300 Gossypium hirsutum HOM05D001736 ORTHO05D002344 2.0e-07 60.1 85 45.9
Gorai.009G217800 Gossypium raimondii HOM05D001736 ORTHO05D002344 2.0e-07 60.1 85 45.9
A02p33940 Brassica napus HOM05D001736 ORTHO05D017570 3.4e-07 59.3 95 44.2
MD08G1088200 Malus domestica HOM05D001736 ORTHO05D002344 3.4e-07 59.3 83 49.4
Duzib116G0147 Durio zibethinus HOM05D001736 ORTHO05D002344 4.4e-07 58.9 111 40.5
PGSC0003DMG401011550 Solanum tuberosum HOM05D001736 ORTHO05D002344 4.4e-07 58.9 98 40.8
Cpa.g.sc21.116 Carica papaya HOM05D001736 ORTHO05D002344 5.7e-07 58.5 83 47.0
Nitab4.5_0007809g0020 Nicotiana tabacum HOM05D001736 ORTHO05D002344 5.7e-07 58.5 100 38.0
CAN.G107.5 Capsicum annuum HOM05D001736 ORTHO05D002344 7.5e-07 58.2 124 35.5
Haze_18107 Corylus avellana HOM05D001736 ORTHO05D002344 7.5e-07 58.2 94 46.8
Solyc12g088440.2 Solanum lycopersicum HOM05D001736 ORTHO05D002344 7.5e-07 58.2 98 39.8
Sopen12g030420 Solanum pennellii HOM05D001736 ORTHO05D002344 7.5e-07 58.2 98 39.8
Cfa018023 Carpinus fangiana HOM05D001736 ORTHO05D002344 9.8e-07 57.8 94 46.8
CiPaw.16G034600 Carya illinoinensis HOM05D001736 ORTHO05D002344 9.8e-07 57.8 104 41.3
Cc10_g05540 Coffea canephora HOM05D001736 ORTHO05D002344 9.8e-07 57.8 103 40.8
Potri.014G019100 Populus trichocarpa HOM05D001736 ORTHO05D002344 9.8e-07 57.8 125 36.8
CAN.G1054.22 Capsicum annuum HOM05D001736 ORTHO05D002344 1.3e-06 57.4 80 45.0
MELO3C010819.2 Cucumis melo HOM05D001736 ORTHO05D002344 1.7e-06 57.0 135 35.6
Migut.C00502 Erythranthe guttata HOM05D001736 ORTHO05D002344 1.7e-06 57.0 100 43.0
COL.COLO4_28542 Corchorus olitorius HOM05D001736 ORTHO05D002344 2.2e-06 56.6 110 39.1
Sabra14G0012500 Salix brachista HOM05D001736 ORTHO05D002344 2.2e-06 56.6 90 43.3
Sopen04g031760 Solanum pennellii HOM05D001736 ORTHO05D002344 2.2e-06 56.6 99 40.4
DCAR_018510 Daucus carota HOM05D001736 ORTHO05D002344 2.8e-06 56.2 86 46.5
Dinv44979 Davidia involucrata HOM05D001736 ORTHO05D002344 2.8e-06 56.2 83 45.8
Manes.18G044100 Manihot esculenta HOM05D001736 ORTHO05D002344 2.8e-06 56.2 135 34.8
Peaxi162Scf00081g01225 Petunia axillaris HOM05D001736 ORTHO05D002344 2.8e-06 56.2 109 37.6
Nitab4.5_0000934g0130 Nicotiana tabacum HOM05D001736 ORTHO05D002344 3.7e-06 55.8 108 37.0
Nitab4.5_0004707g0010 Nicotiana tabacum HOM05D001736 ORTHO05D002344 3.7e-06 55.8 108 37.0
SalBow7G0218 Salvia bowleyana HOM05D001736 ORTHO05D002344 3.7e-06 55.8 86 47.7
Solyc04g078130.4 Solanum lycopersicum HOM05D001736 ORTHO05D002344 3.7e-06 55.8 80 46.2
Dinv39239 Davidia involucrata HOM05D001736 ORTHO05D002344 4.9e-06 55.5 109 40.4
Gohir.A02G081502 Gossypium hirsutum HOM05D001736 ORTHO05D002344 4.9e-06 55.5 103 39.8
Gohir.D02G089300 Gossypium hirsutum HOM05D001736 ORTHO05D002344 4.9e-06 55.5 103 39.8
Gorai.005G100000 Gossypium raimondii HOM05D001736 ORTHO05D002344 4.9e-06 55.5 103 39.8
Actinidia38094 Actinidia chinensis HOM05D001736 ORTHO05D002344 6.3e-06 55.1 104 40.4
ECA247G0688 Erigeron canadensis HOM05D001736 ORTHO05D002344 6.3e-06 55.1 76 42.1
Hund05316 Selenicereus undatus HOM05D001736 ORTHO05D002344 8.3e-06 54.7 83 45.8
PGSC0003DMG400021515 Solanum tuberosum HOM05D001736 ORTHO05D002344 8.3e-06 54.7 80 45.0


User provided reference genes

Program Settings