Gene: AT1G27700
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G27700
- Transcript Identifier AT1G27700.1
- Gene Type Coding gene
- Location Chr1 : 9640394-9641752 : negative
Gene Family Information
- ID HOM05D001736
- #Genes/#Species 373/92
- Phylogenetic origin
- ID ORTHO05D002344
- #Genes/#Species 296/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G27700.1
- uniprot Q940U5
Descriptions
- Description Syntaxin/t-SNARE family protein
- Computational description Syntaxin/t-SNARE family protein; INVOLVED IN: Golgi vesicle transport, vesicle-mediated transport; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: t-SNARE (InterPro:IPR010989), Syntaxin 6, N-terminal (InterPro:IPR015260); BEST Arabidopsis thaliana protein match is: Syntaxin/t-SNARE family protein (TAIR:AT4G30240.1); Has 134 Blast hits to 133 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 132; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048278 | IBA | Gene Ontology | vesicle docking | 1 |
| GO:0048193 | IEA | Gene Ontology | Golgi vesicle transport | |
| GO:0048193 | IEA | InterPro | Golgi vesicle transport | |
| GO:0016192 | IEA | GOA Database | vesicle-mediated transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0006886 | IBA | Gene Ontology | intracellular protein transport | 1 |
| GO:0006906 | IBA | Gene Ontology | vesicle fusion | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000149 | IBA | Gene Ontology | SNARE binding | 1 |
| GO:0005484 | IBA | Gene Ontology | SNAP receptor activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IBA | Gene Ontology | integral component of membrane | 1 |
| GO:0005634 | IDA | GOA Database | nucleus | |
| GO:0005634 | HDA ISM | Gene Ontology | nucleus | 2 |
| GO:0031201 | IBA | Gene Ontology | SNARE complex | 1 |
| GO:0012505 | IBA | Gene Ontology | endomembrane system | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |