Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p25710 Brassica napus HOM05D000742 ORTHO05D033545 1.1e-34 149.4 77 100.0
BolC4t24238H Brassica oleracea HOM05D000742 ORTHO05D033545 1.1e-34 149.4 77 100.0
BraA07t28058Z Brassica rapa HOM05D000742 ORTHO05D000924 6.1e-17 90.5 79 68.4
A07p02590 Brassica napus HOM05D000742 ORTHO05D000924 1.8e-16 89.0 79 67.1
Sp3g31480 Schrenkiella parvula HOM05D000742 ORTHO05D000924 2.3e-16 88.6 78 62.8
BcaC06g36363 Brassica carinata HOM05D000742 ORTHO05D000924 6.7e-16 87.0 78 66.7
BcaB03g16591 Brassica carinata HOM05D000742 ORTHO05D000924 8.7e-16 86.7 78 66.7
C07p04890 Brassica napus HOM05D000742 ORTHO05D000924 1.5e-15 85.9 79 65.8
BolC7t40890H Brassica oleracea HOM05D000742 ORTHO05D000924 1.5e-15 85.9 79 65.8
Aa31LG9G18090 Aethionema arabicum HOM05D000742 ORTHO05D000924 9.7e-15 83.2 78 59.0
Thhalv10022812m.g Eutrema salsugineum HOM05D000742 ORTHO05D000924 1.3e-14 82.8 78 59.0
Carub.0007s3052 Capsella rubella HOM05D000742 ORTHO05D000924 3.7e-14 81.3 80 61.2
AT5G32450 Arabidopsis thaliana HOM05D000742 ORTHO05D000924 6.3e-14 80.5 76 59.2
Gohir.D11G244100 Gossypium hirsutum HOM05D000742 ORTHO05D000924 1.1e-13 79.7 78 56.4
Cpa.g.sc161.3 Carica papaya HOM05D000742 ORTHO05D000924 1.4e-13 79.3 77 57.1
Gorai.007G259600 Gossypium raimondii HOM05D000742 ORTHO05D000924 3.1e-13 78.2 78 55.1
CSS0006716 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 4.1e-13 77.8 78 55.1
CSS0039542 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 4.1e-13 77.8 78 55.1
AL7G43610 Arabidopsis lyrata HOM05D000742 ORTHO05D000924 5.3e-13 77.4 78 59.0
Gohir.A11G232900 Gossypium hirsutum HOM05D000742 ORTHO05D000924 5.3e-13 77.4 78 55.1
CARHR217120 Cardamine hirsuta HOM05D000742 ORTHO05D000924 6.9e-13 77.0 80 58.8
CSS0024312 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 1.5e-12 75.9 78 53.8
Dinv25098 Davidia involucrata HOM05D000742 ORTHO05D000924 3.4e-12 74.7 78 53.8
HanXRQChr07g0197121 Helianthus annuus HOM05D000742 ORTHO05D000924 3.4e-12 74.7 72 54.2
TWI34G1045 Tripterygium wilfordii HOM05D000742 ORTHO05D000924 3.4e-12 74.7 78 52.6
Manes.09G139000 Manihot esculenta HOM05D000742 ORTHO05D000924 4.5e-12 74.3 78 52.6
Manes.08G146100 Manihot esculenta HOM05D000742 ORTHO05D000924 5.9e-12 73.9 78 52.6
Actinidia03946 Actinidia chinensis HOM05D000742 ORTHO05D000924 7.7e-12 73.6 78 51.3
CiPaw.10G126000 Carya illinoinensis HOM05D000742 ORTHO05D000924 7.7e-12 73.6 72 56.9
Duzib177G0782 Durio zibethinus HOM05D000742 ORTHO05D000924 7.7e-12 73.6 78 52.6
Lalb_Chr22g0358911 Lupinus albus HOM05D000742 ORTHO05D000924 7.7e-12 73.6 78 52.6
GSVIVG01022464001 Vitis vinifera HOM05D000742 ORTHO05D000924 7.7e-12 73.6 61 62.3
COL.COLO4_32973 Corchorus olitorius HOM05D000742 ORTHO05D000924 1.0e-11 73.2 76 52.6
Actinidia37792 Actinidia chinensis HOM05D000742 ORTHO05D000924 1.3e-11 72.8 72 54.2
HanXRQChr14g0453111 Helianthus annuus HOM05D000742 ORTHO05D000924 1.7e-11 72.4 78 51.3
Potri.019G037600 Populus trichocarpa HOM05D000742 ORTHO05D000924 1.7e-11 72.4 61 62.3
SGA_v2.0_scaffold31G12804 Striga asiatica HOM05D000742 ORTHO05D000924 1.7e-11 72.4 61 62.3
Atru.chr2.1408 Acer truncatum HOM05D000742 ORTHO05D000924 2.2e-11 72.0 78 52.6
Haze_20471 Corylus avellana HOM05D000742 ORTHO05D000924 2.2e-11 72.0 72 55.6
Nn6g32410 Nelumbo nucifera HOM05D000742 ORTHO05D000924 2.2e-11 72.0 61 63.9
Nitab4.5_0002131g0050 Nicotiana tabacum HOM05D000742 ORTHO05D000924 2.2e-11 72.0 69 53.6
THA.LOC104821468 Tarenaya hassleriana HOM05D000742 ORTHO05D000924 2.2e-11 72.0 78 52.6
TWI32G0316 Tripterygium wilfordii HOM05D000742 ORTHO05D000924 2.2e-11 72.0 76 52.6
MSTRG.26563 Avicennia marina HOM05D000742 ORTHO05D000924 2.9e-11 71.6 78 52.6
MELO3C024750.2 Cucumis melo HOM05D000742 ORTHO05D000924 2.9e-11 71.6 77 53.2
CsaV3_2G035910 Cucumis sativus L. HOM05D000742 ORTHO05D000924 2.9e-11 71.6 77 53.2
Nitab4.5_0000123g0030 Nicotiana tabacum HOM05D000742 ORTHO05D000924 2.9e-11 71.6 69 53.6
Dinv11926 Davidia involucrata HOM05D000742 ORTHO05D000924 3.8e-11 71.2 78 52.6
PGSC0003DMG402007209 Solanum tuberosum HOM05D000742 ORTHO05D000924 3.8e-11 71.2 63 57.1
TAR633G2015 Trochodendron aralioides HOM05D000742 ORTHO05D000924 3.8e-11 71.2 72 55.6
arahy.Tifrunner.gnm1.ann1.5X1K1M Arachis hypogaea HOM05D000742 ORTHO05D000924 5.0e-11 70.9 78 52.6
arahy.Tifrunner.gnm1.ann1.S0TND5 Arachis hypogaea HOM05D000742 ORTHO05D000924 5.0e-11 70.9 78 52.6
ClCG02G007840 Citrullus lanatus HOM05D000742 ORTHO05D000924 5.0e-11 70.9 78 52.6
Glyma.16G038800 Glycine max HOM05D000742 ORTHO05D000924 5.0e-11 70.9 78 51.3
PGR042G1108 Punica granatum HOM05D000742 ORTHO05D000924 5.0e-11 70.9 77 51.9
Sabra19G0048900 Salix brachista HOM05D000742 ORTHO05D000924 5.0e-11 70.9 78 51.3
Sc01g0005110 Simmondsia chinensis HOM05D000742 ORTHO05D000924 5.0e-11 70.9 61 57.4
Solyc10g076890.3 Solanum lycopersicum HOM05D000742 ORTHO05D000924 5.0e-11 70.9 63 57.1
Sopen10g028580 Solanum pennellii HOM05D000742 ORTHO05D000924 5.0e-11 70.9 63 57.1
CANSAT78G0310 Cannabis sativa HOM05D000742 ORTHO05D000924 6.5e-11 70.5 71 56.3
Migut.J00761 Erythranthe guttata HOM05D000742 ORTHO05D000924 8.5e-11 70.1 78 52.6
Lsat_1_v5_gn_2_103961 Lactuca sativa HOM05D000742 ORTHO05D000924 1.1e-10 69.7 70 52.9
ECA238G1035 Erigeron canadensis HOM05D000742 ORTHO05D000924 1.4e-10 69.3 72 51.4
HanXRQChr01g0026371 Helianthus annuus HOM05D000742 ORTHO05D000924 1.4e-10 69.3 61 60.7
Oeu029557.2 Olea europaea HOM05D000742 ORTHO05D000924 1.4e-10 69.3 78 50.0
Thecc.05G246700 Theobroma cacao HOM05D000742 ORTHO05D000924 1.4e-10 69.3 71 53.5
Ca_08287_v3 Cicer arietinum L. HOM05D000742 ORTHO05D000924 1.9e-10 68.9 78 50.0
Cc06_g07250 Coffea canephora HOM05D000742 ORTHO05D000924 1.9e-10 68.9 68 52.9
Potri.013G055100 Populus trichocarpa HOM05D000742 ORTHO05D000924 1.9e-10 68.9 71 54.9
Rhsim03G0054700 Rhododendron simsii HOM05D000742 ORTHO05D000924 1.9e-10 68.9 71 54.9
Lsat_1_v5_gn_1_56260 Lactuca sativa HOM05D000742 ORTHO05D000924 2.5e-10 68.6 64 59.4
Medtr7g086080 Medicago truncatula HOM05D000742 ORTHO05D000924 2.5e-10 68.6 72 52.8
QL07p018974 Quercus lobata HOM05D000742 ORTHO05D000924 2.5e-10 68.6 80 51.2
EL10Ac5g11766 Beta vulgaris HOM05D000742 ORTHO05D000924 3.2e-10 68.2 61 59.0
MELO3C008814.2 Cucumis melo HOM05D000742 ORTHO05D000924 3.2e-10 68.2 60 61.7
Sed0007997 Sechium edule HOM05D000742 ORTHO05D000924 3.2e-10 68.2 76 52.6
Glyma.19G114000 Glycine max HOM05D000742 ORTHO05D000924 4.2e-10 67.8 77 49.4
ClCG04G005420 Citrullus lanatus HOM05D000742 ORTHO05D000924 5.5e-10 67.4 77 51.9
Duzib128G1872 Durio zibethinus HOM05D000742 ORTHO05D000924 5.5e-10 67.4 78 48.7
Oeu020208.2 Olea europaea HOM05D000742 ORTHO05D000924 5.5e-10 67.4 74 50.0
Phvul.004G050700 Phaseolus vulgaris HOM05D000742 ORTHO05D000924 7.2e-10 67.0 72 54.2
QL06p004686 Quercus lobata HOM05D000742 ORTHO05D000924 7.2e-10 67.0 75 53.3
VMungo1383G0416 Vigna mungo HOM05D000742 ORTHO05D000924 7.2e-10 67.0 77 49.4
DCAR_016965 Daucus carota HOM05D000742 ORTHO05D000924 9.4e-10 66.6 78 50.0
Psat3g087680 Pisum sativum HOM05D000742 ORTHO05D000924 9.4e-10 66.6 72 52.8
Zm00001eb214900 Zea mays HOM05D000742 ORTHO05D000924 9.4e-10 66.6 64 53.1
Lalb_Chr06g0174081 Lupinus albus HOM05D000742 ORTHO05D000924 1.2e-09 66.2 72 52.8
Ciclev10021716m.g Citrus clementina HOM05D000742 ORTHO05D000924 1.6e-09 65.9 77 51.9
TPR.G31020 Trifolium pratense HOM05D000742 ORTHO05D000924 1.6e-09 65.9 70 52.9
Eucgr.A02121 Eucalyptus grandis HOM05D000742 ORTHO05D000924 2.1e-09 65.5 59 57.6
FvH4_1g28380 Fragaria vesca HOM05D000742 ORTHO05D000924 2.1e-09 65.5 61 59.0
FAN19G2804 Fragaria x ananassa HOM05D000742 ORTHO05D000924 2.1e-09 65.5 61 59.0
FAN28G1687 Fragaria x ananassa HOM05D000742 ORTHO05D000924 2.1e-09 65.5 61 59.0
Lj2A418T68 Lonicera japonica HOM05D000742 ORTHO05D000924 2.1e-09 65.5 54 63.0
Phvul.001G113300 Phaseolus vulgaris HOM05D000742 ORTHO05D000924 2.1e-09 65.5 77 48.1
Pp3c19_9760 Physcomitrium patens HOM05D000742 ORTHO05D000924 2.1e-09 65.5 55 60.0
Prupe.7G008000 Prunus persica HOM05D000742 ORTHO05D000924 2.1e-09 65.5 71 53.5
Sabra13G0049600 Salix brachista HOM05D004225 ORTHO05D004728 2.1e-09 65.5 72 52.8
MSTRG.5925 Avicennia marina HOM05D000742 ORTHO05D000924 2.7e-09 65.1 74 52.7
Lj1g0018194 Lotus japonicus HOM05D000742 ORTHO05D000924 2.7e-09 65.1 72 51.4
Peaxi162Scf00003g05369 Petunia axillaris HOM05D000742 ORTHO05D000924 3.6e-09 64.7 73 56.2
RcHm_v2.0_Chr3g0496611 Rosa chinensis HOM05D000742 ORTHO05D000924 3.6e-09 64.7 61 57.4
CDE04G3087 Ceratophyllum demersum HOM05D000742 ORTHO05D000924 4.6e-09 64.3 78 47.4
Aqoxy1G00552 Aquilegia oxysepala HOM05D000742 ORTHO05D000924 6.1e-09 63.9 72 51.4
CsaV3_4G012160 Cucumis sativus L. HOM05D000742 ORTHO05D000924 6.1e-09 63.9 71 53.5
PSO384G2219 Papaver somniferum HOM05D000742 ORTHO05D000924 6.1e-09 63.9 72 54.2
CDE07G1794 Ceratophyllum demersum HOM05D000742 ORTHO05D000924 7.9e-09 63.5 78 48.7
MBI05_g25767_MAGBIO Magnolia biondii HOM05D000742 ORTHO05D033545 7.9e-09 63.5 67 52.2
MD12G1007200 Malus domestica HOM05D000742 ORTHO05D000924 7.9e-09 63.5 70 52.9
vmacro07550 Vaccinium macrocarpon HOM05D000742 ORTHO05D000924 7.9e-09 63.5 65 53.8
Os03g0748900 Oryza sativa ssp. japonica HOM05D000742 ORTHO05D000924 2.3e-08 62.0 64 51.6
HPP92_018636 Vanilla planifolia HOM05D000742 ORTHO05D000924 2.3e-08 62.0 52 57.7
ATR0697G118 Amborella trichopoda HOM05D000742 ORTHO05D000924 3.0e-08 61.6 74 51.4
Pp3c18_3230 Physcomitrium patens HOM05D000742 ORTHO05D000924 1.1e-07 59.7 55 56.4
Os06g0112400 Oryza sativa ssp. japonica HOM05D000742 ORTHO05D000924 2.0e-07 58.9 52 53.8
Pp3c22_22390 Physcomitrium patens HOM05D000742 ORTHO05D000924 2.0e-07 58.9 55 54.5
SGA_v2.0_scaffold44G16899 Striga asiatica HOM05D000742 ORTHO05D000924 2.0e-07 58.9 72 45.8
DCAR_013477 Daucus carota HOM05D000742 ORTHO05D000924 3.3e-07 58.2 76 48.7
HPP92_016459 Vanilla planifolia HOM05D000742 ORTHO05D003741 3.3e-07 58.2 53 52.8
HPP92_027150 Vanilla planifolia HOM05D000742 ORTHO05D003741 3.3e-07 58.2 53 52.8
MSTRG.1997 Avicennia marina HOM05D000742 ORTHO05D000924 5.7e-07 57.4 61 49.2
Zm00001eb379100 Zea mays HOM05D000742 ORTHO05D000924 5.7e-07 57.4 52 53.8
Manes.09G125200 Manihot esculenta HOM05D000742 ORTHO05D000924 7.4e-07 57.0 61 44.3
unitig_27.g24736 Utricularia gibba HOM05D000742 ORTHO05D000924 7.4e-07 57.0 59 50.8
Actinidia03353 Actinidia chinensis HOM05D000742 ORTHO05D000924 9.7e-07 56.6 72 40.3
ClCG09G016890 Citrullus lanatus HOM05D000742 ORTHO05D000924 9.7e-07 56.6 55 47.3
PGR042G0529 Punica granatum HOM05D000742 ORTHO05D000924 9.7e-07 56.6 61 42.6
ATR0829G069 Amborella trichopoda HOM05D000742 ORTHO05D000924 1.3e-06 56.2 78 39.7
VMungo0251G0220 Vigna mungo HOM05D000742 ORTHO05D000924 1.3e-06 56.2 52 50.0
HanXRQChr16g0512511 Helianthus annuus HOM05D000742 ORTHO05D000924 1.7e-06 55.8 61 44.3
Lalb_Chr09g0325561 Lupinus albus HOM05D000742 ORTHO05D000924 1.7e-06 55.8 61 44.3
Rhsim03G0222500 Rhododendron simsii HOM05D000742 ORTHO05D000924 1.7e-06 55.8 61 45.9
CSS0027406 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 2.2e-06 55.5 61 39.3
CSS0045847 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 2.2e-06 55.5 61 39.3
CSS0047025 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 2.2e-06 55.5 61 39.3
CANSAT56G0957 Cannabis sativa HOM05D000742 ORTHO05D000924 2.2e-06 55.5 61 44.3
Gohir.A02G141000 Gossypium hirsutum HOM05D000742 ORTHO05D000924 2.2e-06 55.5 52 50.0
Gorai.003G053100 Gossypium raimondii HOM05D000742 ORTHO05D000924 2.2e-06 55.5 52 50.0
unitig_92.g28228 Utricularia gibba HOM05D000742 ORTHO05D000924 2.2e-06 55.5 59 50.8
VMungo1215G1061 Vigna mungo HOM05D000742 ORTHO05D000924 2.2e-06 55.5 53 49.1
Zm00001eb268790 Zea mays HOM05D000742 ORTHO05D000924 2.2e-06 55.5 52 50.0
Carub.0002s1444 Capsella rubella HOM05D000742 ORTHO05D000924 2.8e-06 55.1 69 39.1
Nitab4.5_0000021g0620 Nicotiana tabacum HOM05D000742 ORTHO05D000924 2.8e-06 55.1 61 41.0
PGSC0003DMG400003159 Solanum tuberosum HOM05D000742 ORTHO05D000924 2.8e-06 55.1 61 41.0
PGR142G2551 Punica granatum HOM05D000742 ORTHO05D000924 3.7e-06 54.7 78 39.7
HPP92_025856 Vanilla planifolia HOM05D000742 ORTHO05D000924 3.7e-06 54.7 61 45.9
COL.COLO4_15225 Corchorus olitorius HOM05D000742 ORTHO05D000924 4.8e-06 54.3 58 46.6
Os04g0641400 Oryza sativa ssp. japonica HOM05D000742 ORTHO05D003741 4.8e-06 54.3 52 46.2
Psat0s2923g0040 Pisum sativum HOM05D000742 ORTHO05D000924 4.8e-06 54.3 61 42.6
CSS0044634 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 6.3e-06 53.9 61 42.6
Gohir.D03G051500 Gossypium hirsutum HOM05D000742 ORTHO05D000924 6.3e-06 53.9 52 50.0
Lj1C1033T24 Lonicera japonica HOM05D000742 ORTHO05D000924 6.3e-06 53.9 72 40.3
Phvul.002G138100 Phaseolus vulgaris HOM05D000742 ORTHO05D000924 6.3e-06 53.9 53 47.2
Pp3c23_20750 Physcomitrium patens HOM05D000742 ORTHO05D000924 6.3e-06 53.9 66 43.9
CSS0026657 Camellia sinensis var. sinensis HOM05D000742 ORTHO05D000924 8.2e-06 53.5 52 48.1
Duzib106G1109 Durio zibethinus HOM05D000742 ORTHO05D000924 8.2e-06 53.5 63 44.4
Lalb_Chr05g0215831 Lupinus albus HOM05D000742 ORTHO05D000924 8.2e-06 53.5 52 46.2
Nn3g16210 Nelumbo nucifera HOM05D000742 ORTHO05D011171 8.2e-06 53.5 52 48.1
PGR042G0913 Punica granatum HOM05D000742 ORTHO05D000924 8.2e-06 53.5 63 42.9
Sc19g0000120 Simmondsia chinensis HOM05D000742 ORTHO05D000924 8.2e-06 53.5 61 47.5
Thecc.03G307700 Theobroma cacao HOM05D000742 ORTHO05D000924 8.2e-06 53.5 52 48.1


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