Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p22670 Brassica napus HOM05D001200 ORTHO05D009713 2.4e-32 141.7 82 100.0
ATCG01060 Arabidopsis thaliana HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
BolSC29t60505H Brassica oleracea HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
BolSC35t60703H Brassica oleracea HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
BolSC37t60792H Brassica oleracea HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
BolSC45t60910H Brassica oleracea HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 95.1
BolSC46t60959H Brassica oleracea HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
BolSC49t61142H Brassica oleracea HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
BraSC103t45428Z Brassica rapa HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
BraSC143t45661Z Brassica rapa HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
BraSC179t45775Z Brassica rapa HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
BraSC59t46550Z Brassica rapa HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
CAN.G1526.3 Capsicum annuum HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
CAN.G1526.8 Capsicum annuum HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
CAN.G278.4 Capsicum annuum HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
Migut.D01253 Erythranthe guttata HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
Gohir.1Z049631 Gossypium hirsutum HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
Gohir.A02G134400 Gossypium hirsutum HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
Gohir.A09G046200 Gossypium hirsutum HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
Hma1.2p1_0382F.1_g140210 Hydrangea macrophylla HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
Nn064s42211 Nelumbo nucifera HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
PSO548G0036 Papaver somniferum HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
PGR111G0008 Punica granatum HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
RcHm_v2.0_Chr5g0017221 Rosa chinensis HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
RcHm_v2.0_Chr5g0043041 Rosa chinensis HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
RcHm_v2.0_CPg0502781 Rosa chinensis HOM05D001200 ORTHO05D009713 2.1e-31 138.7 82 97.6
HanXRQChr00c0336g0573651 Helianthus annuus HOM05D001200 ORTHO05D009713 3.5e-31 137.9 82 96.3
HanXRQChr09g0246671 Helianthus annuus HOM05D001200 ORTHO05D009713 3.5e-31 137.9 82 96.3
Lsat_1_v5_gn_1_14180 Lactuca sativa HOM05D001200 ORTHO05D009713 3.5e-31 137.9 82 96.3
EL10As15g24099 Beta vulgaris HOM05D001200 ORTHO05D009778 6.0e-31 137.1 82 96.3
Nn3g20217 Nelumbo nucifera HOM05D001200 ORTHO05D009713 7.8e-31 136.7 82 95.1
CAN.G965.7 Capsicum annuum HOM05D001200 ORTHO05D009713 1.0e-30 136.3 82 96.3
BolC9t56926H Brassica oleracea HOM05D001200 ORTHO05D009713 2.3e-30 135.2 82 93.9
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 5.1e-30 134.0 79 97.5
Gorai.009G377500 Gossypium raimondii HOM05D001200 ORTHO05D009713 8.7e-30 133.3 82 93.9
Nn1g00557 Nelumbo nucifera HOM05D001200 ORTHO05D009713 1.1e-29 132.9 82 92.7
DCAR_032537 Daucus carota HOM05D001200 ORTHO05D009713 1.5e-29 132.5 82 93.9
CARHR282430 Cardamine hirsuta HOM05D001200 ORTHO05D009713 2.5e-29 131.7 82 95.1
Gohir.D06G133600 Gossypium hirsutum HOM05D001200 ORTHO05D009713 2.5e-29 131.7 82 90.2
Nitab4.5_0001313g0070 Nicotiana tabacum HOM05D001200 ORTHO05D009778 2.5e-29 131.7 82 93.9
Oeu043656.1 Olea europaea HOM05D001200 ORTHO05D009713 4.3e-29 131.0 82 92.7
HanXRQChr17g0557761 Helianthus annuus HOM05D001200 ORTHO05D002731 5.6e-29 130.6 78 96.2
HanXRQChr02g0038661 Helianthus annuus HOM05D001200 ORTHO05D009713 7.3e-29 130.2 82 90.2
HanXRQChr09g0244731 Helianthus annuus HOM05D001200 ORTHO05D009713 9.6e-29 129.8 77 96.1
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 9.6e-29 129.8 77 97.4
arahy.Tifrunner.gnm1.ann1.USFH3V Arachis hypogaea HOM05D001200 ORTHO05D009713 1.6e-28 129.0 81 91.4
Medtr4g050960 Medicago truncatula HOM05D001200 ORTHO05D009713 3.6e-28 127.9 82 93.9
Sed0023939 Sechium edule HOM05D001200 ORTHO05D009713 6.2e-28 127.1 82 75.6
HanXRQChr00c0504g0575301 Helianthus annuus HOM05D001200 ORTHO05D009713 2.4e-27 125.2 77 94.8
C09p40340 Brassica napus HOM05D001200 ORTHO05D009713 3.1e-27 124.8 80 90.0
Glyma.18G155300 Glycine max HOM05D001200 ORTHO05D009713 4.0e-27 124.4 82 72.0
Cpa.g.sc63.22 Carica papaya HOM05D001200 ORTHO05D009713 1.5e-26 122.5 82 91.5
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 3.4e-26 121.3 81 90.1
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 3.4e-26 121.3 81 90.1
Hund27630 Selenicereus undatus HOM05D001200 ORTHO05D009713 3.4e-26 121.3 81 90.1
Hund28597 Selenicereus undatus HOM05D001200 ORTHO05D009713 3.4e-26 121.3 81 90.1
Os09g0485201 Oryza sativa ssp. japonica HOM05D001200 ORTHO05D009713 3.8e-25 117.9 82 82.9
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 4.9e-25 117.5 75 94.7
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 6.4e-25 117.1 74 93.2
Hund27883 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-25 117.1 76 93.4
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-25 117.1 76 93.4
Hund28851 Selenicereus undatus HOM05D001200 ORTHO05D009713 6.4e-25 117.1 76 93.4
Hund29433 Selenicereus undatus HOM05D001200 ORTHO05D009713 6.4e-25 117.1 76 93.4
Hund30513 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-25 117.1 76 93.4
Gohir.A09G017925 Gossypium hirsutum HOM05D001200 ORTHO05D009713 1.4e-24 115.9 72 93.1
BraSC25t45909Z Brassica rapa HOM05D001200 ORTHO05D009713 4.2e-24 114.4 71 93.0
Potri.019G014344 Populus trichocarpa HOM05D001200 ORTHO05D009713 2.7e-23 111.7 82 64.6
arahy.Tifrunner.gnm1.ann1.WH1VZM Arachis hypogaea HOM05D001200 ORTHO05D009713 3.9e-22 107.8 81 65.4
Sed0013644 Sechium edule HOM05D000533 ORTHO05D006151 3.9e-22 107.8 69 92.8
Sed0016654 Sechium edule HOM05D000533 ORTHO05D006151 3.9e-22 107.8 69 92.8
Sed0021575 Sechium edule HOM05D000533 ORTHO05D006151 3.9e-22 107.8 69 92.8
HanXRQChr02g0038701 Helianthus annuus HOM05D001200 ORTHO05D009713 6.7e-22 107.1 70 91.4
Nitab4.5_0007979g0060 Nicotiana tabacum HOM05D001200 ORTHO05D009778 8.7e-22 106.7 69 72.5
Nn1g08635 Nelumbo nucifera HOM05D001200 ORTHO05D009713 1.9e-21 105.5 78 82.1
BolSC29t60545H Brassica oleracea HOM05D001200 ORTHO05D009713 5.6e-21 104.0 47 95.7
BolSC35t60693H Brassica oleracea HOM05D001200 ORTHO05D009713 5.6e-21 104.0 47 95.7
BolSC44t60821H Brassica oleracea HOM05D001200 ORTHO05D009713 5.6e-21 104.0 47 95.7
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 5.6e-21 104.0 47 95.7
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 5.6e-21 104.0 47 95.7
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 5.6e-21 104.0 47 95.7
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 5.6e-21 104.0 47 95.7
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 5.6e-21 104.0 47 95.7
HanXRQChr17g0569731 Helianthus annuus HOM05D001200 ORTHO05D009778 5.6e-21 104.0 47 95.7
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 5.6e-21 104.0 47 95.7
CsaV3_UNG210150 Cucumis sativus L. HOM05D001200 ORTHO05D009713 2.8e-20 101.7 69 87.0
GSVIVG01034636001 Vitis vinifera HOM05D001200 ORTHO05D009713 2.8e-20 101.7 46 95.7
SMO086G0058 Selaginella moellendorffii HOM05D001200 ORTHO05D009713 3.7e-20 101.3 81 60.5
Sed0012820 Sechium edule HOM05D001200 ORTHO05D009713 1.8e-19 99.0 82 80.5
TPR.G17259 Trifolium pratense HOM05D000404 ORTHO05D009713 2.4e-19 98.6 47 91.5
C09p40360 Brassica napus HOM05D001200 ORTHO05D009713 4.0e-19 97.8 82 62.2
BolC9t56924H Brassica oleracea HOM05D001200 ORTHO05D009713 4.0e-19 97.8 82 62.2
HanXRQChr13g0388461 Helianthus annuus HOM05D001200 ORTHO05D009713 5.3e-19 97.4 47 91.5
HanXRQChr03g0073101 Helianthus annuus HOM05D001200 ORTHO05D002731 6.9e-19 97.1 47 91.5
C07p33440 Brassica napus HOM05D001200 ORTHO05D009713 2.0e-18 95.5 82 62.2
C09p24630 Brassica napus HOM05D001200 ORTHO05D009713 2.0e-18 95.5 82 62.2
C09p40200 Brassica napus HOM05D001200 ORTHO05D009713 2.0e-18 95.5 82 62.2
Hund24329 Selenicereus undatus HOM05D001200 ORTHO05D009713 4.5e-18 94.4 82 58.5
BolC2t10595H Brassica oleracea HOM05D001200 ORTHO05D009713 4.6e-15 84.3 38 92.1
AL9U11952 Arabidopsis lyrata HOM05D001200 ORTHO05D009713 1.1e-13 79.7 54 68.5
TPR.G30364 Trifolium pratense HOM05D001200 ORTHO05D009713 1.5e-13 79.3 57 66.7
HanXRQChr14g0428461 Helianthus annuus HOM05D001200 ORTHO05D009713 1.9e-13 79.0 55 67.3
Gorai.004G082100 Gossypium raimondii HOM05D001200 ORTHO05D009713 2.5e-13 78.6 55 67.3
MELO3C027236.2 Cucumis melo HOM05D001200 ORTHO05D009713 5.7e-13 77.4 55 67.3
Gohir.A05G291020 Gossypium hirsutum HOM05D001163 ORTHO05D001769 5.7e-13 77.4 33 97.0
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 7.4e-13 77.0 36 91.7
MELO3C029829.2 Cucumis melo HOM05D001200 ORTHO05D009713 1.6e-12 75.9 55 65.5
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 1.6e-12 75.9 34 94.1
CARHR258570 Cardamine hirsuta HOM05D001200 ORTHO05D009713 4.8e-12 74.3 55 67.3
CAN.G8.22 Capsicum annuum HOM05D001200 ORTHO05D009713 2.4e-11 72.0 55 63.6
TPR.G6643 Trifolium pratense HOM05D001044 ORTHO05D008486 9.0e-11 70.1 52 65.4
Gohir.D08G077250 Gossypium hirsutum HOM05D001200 ORTHO05D009713 4.5e-10 67.8 55 60.0
HanXRQChr08g0211961 Helianthus annuus HOM05D001200 ORTHO05D002731 5.8e-10 67.4 28 96.4
Lalb_Chr13g0292811 Lupinus albus HOM05D001200 ORTHO05D009713 2.5e-08 62.0 47 59.6
MBI16_g21734_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D009778 7.1e-08 60.5 30 83.3
HanXRQChr08g0213671 Helianthus annuus HOM05D001200 ORTHO05D009713 9.3e-08 60.1 54 53.7
Solyc02g011760.1 Solanum lycopersicum HOM05D001200 ORTHO05D009713 1.6e-07 59.3 49 61.2
Medtr6g080310 Medicago truncatula HOM05D001200 ORTHO05D002731 3.9e-06 54.7 30 80.0
CAN.G904.13 Capsicum annuum HOM05D001200 ORTHO05D009713 6.7e-06 53.9 46 52.2
BolC9t56806H Brassica oleracea HOM05D001200 ORTHO05D009713 8.7e-06 53.5 44 59.1


User provided reference genes

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