Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p20500 Brassica napus HOM05D001038 ORTHO05D010946 8.4e-76 287.0 146 100.0
BolC4t23575H Brassica oleracea HOM05D001038 ORTHO05D010946 8.4e-76 287.0 146 100.0
BraA04t16531Z Brassica rapa HOM05D001038 ORTHO05D010946 2.3e-41 172.6 146 61.6
BcaC08g45228 Brassica carinata HOM05D001038 ORTHO05D010946 2.0e-37 159.5 197 48.2
A04p08430 Brassica napus HOM05D001038 ORTHO05D010946 1.3e-36 156.8 197 46.2
BcaB08g34843 Brassica carinata HOM05D001038 ORTHO05D010946 2.2e-36 156.0 207 44.4
BcaC01g03929 Brassica carinata HOM05D001038 ORTHO05D010946 6.9e-30 134.4 183 43.2
BcaC03g14544 Brassica carinata HOM05D001038 ORTHO05D010946 1.3e-28 130.2 204 39.7
BcaC01g04978 Brassica carinata HOM05D001038 ORTHO05D010946 1.7e-28 129.8 207 39.1
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 1.1e-27 127.1 207 38.2
C03p31470 Brassica napus HOM05D001038 ORTHO05D010946 3.2e-27 125.6 207 38.6
C06p00840 Brassica napus HOM05D001038 ORTHO05D010946 7.2e-27 124.4 204 39.2
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 7.9e-26 120.9 207 37.2
BolC3t20322H Brassica oleracea HOM05D001038 ORTHO05D010946 2.0e-24 116.3 182 39.0
BcaB08g36238 Brassica carinata HOM05D011654 ORTHO05D010946 5.2e-17 91.7 165 34.5
BNapus_Darmor_BZH_scaffold_38p00010 Brassica napus HOM05D001038 ORTHO05D010946 2.6e-16 89.4 67 70.1
BcaB01g02416 Brassica carinata HOM05D011654 ORTHO05D010946 5.7e-16 88.2 165 33.3
BcaB06g28199 Brassica carinata HOM05D001038 ORTHO05D010946 9.7e-16 87.4 167 35.3
BcaB01g01507 Brassica carinata HOM05D011654 ORTHO05D010946 7.0e-14 81.3 142 33.8
Thhalv10023964m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 3.8e-12 75.5 206 27.7
C05p34670 Brassica napus HOM05D001038 ORTHO05D032287 5.0e-12 75.1 199 28.1
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.1e-10 69.7 205 25.9
Thhalv10003372m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 8.0e-10 67.8 204 28.9
C09p31530 Brassica napus HOM05D020314 ORTHO05D032005 1.8e-09 66.6 199 27.1
Thhalv10003408m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 3.0e-09 65.9 206 26.2
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 5.2e-09 65.1 156 26.9
BolC2t07874H Brassica oleracea HOM05D001038 ORTHO05D010946 8.8e-09 64.3 179 25.1
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 8.8e-09 64.3 156 26.9
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 1.5e-08 63.5 157 26.8
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 9.7e-08 60.8 99 32.3
BolC3t14874H Brassica oleracea HOM05D001038 ORTHO05D010763 9.7e-08 60.8 79 35.4
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 9.7e-08 60.8 99 32.3
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.7e-07 60.1 97 30.9
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 2.2e-07 59.7 93 37.6
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 4.8e-07 58.5 131 30.5
C07p12200 Brassica napus HOM05D001038 ORTHO05D010763 6.3e-07 58.2 157 25.5
C05p38700 Brassica napus HOM05D037879 ORTHO05D027353 8.2e-07 57.8 202 23.8
BolC5t32325H Brassica oleracea HOM05D037170 ORTHO05D032972 8.2e-07 57.8 58 53.4
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.4e-06 57.0 97 29.9
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 1.4e-06 57.0 97 28.9
A06p18460 Brassica napus HOM05D001038 ORTHO05D039511 1.8e-06 56.6 71 42.3
BolC5t31712H Brassica oleracea HOM05D001038 ORTHO05D032287 1.8e-06 56.6 99 31.3
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-06 56.6 96 32.3
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 2.4e-06 56.2 95 28.4
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.4e-06 56.2 96 28.1
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 3.1e-06 55.8 96 30.2
BcaB02g10814 Brassica carinata HOM05D001038 ORTHO05D010946 4.1e-06 55.5 124 25.0
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 4.1e-06 55.5 198 20.7
BcaC05g27614 Brassica carinata HOM05D037170 ORTHO05D032972 7.0e-06 54.7 58 50.0
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 7.0e-06 54.7 94 31.9
C05p36010 Brassica napus HOM05D037170 ORTHO05D032972 7.0e-06 54.7 58 50.0
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 9.1e-06 54.3 123 30.1
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 9.1e-06 54.3 95 31.6
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 9.1e-06 54.3 156 26.9
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 9.1e-06 54.3 75 38.7
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 9.1e-06 54.3 91 30.8


User provided reference genes

Program Settings