Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p06270 Brassica napus HOM05D002484 ORTHO05D002541 5.4e-40 167.2 81 100.0
C04p06250 Brassica napus HOM05D002484 ORTHO05D002541 5.9e-39 163.7 81 98.8
BcaC02g12225 Brassica carinata HOM05D002484 ORTHO05D002541 2.3e-38 161.8 81 96.3
A05p05280 Brassica napus HOM05D002484 ORTHO05D002541 4.2e-37 157.5 80 91.2
C04p06240 Brassica napus HOM05D002484 ORTHO05D002541 9.5e-37 156.4 81 91.4
BolC4t22248H Brassica oleracea HOM05D002484 ORTHO05D002541 2.8e-36 154.8 81 92.6
BcaC02g12223 Brassica carinata HOM05D002484 ORTHO05D002541 3.6e-36 154.5 81 92.6
BcaC02g12226 Brassica carinata HOM05D002484 ORTHO05D002541 3.6e-36 154.5 81 90.1
A05p05270 Brassica napus HOM05D002484 ORTHO05D002541 3.6e-36 154.5 81 91.4
A05p05350 Brassica napus HOM05D002484 ORTHO05D002541 1.0e-35 152.9 81 88.9
BraA05t19505Z Brassica rapa HOM05D002484 ORTHO05D002541 1.0e-35 152.9 81 88.9
BcaB02g08940 Brassica carinata HOM05D002484 ORTHO05D002541 1.1e-32 142.9 81 87.7
BcaB02g08969 Brassica carinata HOM05D002484 ORTHO05D002541 1.1e-32 142.9 81 87.7
BcaB02g08968 Brassica carinata HOM05D002484 ORTHO05D002541 4.1e-32 141.0 81 86.4
BcaB02g08967 Brassica carinata HOM05D002484 ORTHO05D002541 2.0e-31 138.7 81 85.2
A05p05320 Brassica napus HOM05D003566 ORTHO05D003430 6.8e-27 123.6 71 78.9
A06p39910 Brassica napus HOM05D002484 ORTHO05D002541 2.0e-26 122.1 81 69.1
BraA06t26906Z Brassica rapa HOM05D002484 ORTHO05D002541 2.0e-26 122.1 81 67.9
A02p20250 Brassica napus HOM05D002484 ORTHO05D002541 1.3e-17 92.8 81 53.1
C02p33650 Brassica napus HOM05D002484 ORTHO05D002541 1.3e-17 92.8 81 53.1
BolC2t09339H Brassica oleracea HOM05D002484 ORTHO05D002541 1.3e-17 92.8 81 53.1
BraA02t07059Z Brassica rapa HOM05D002484 ORTHO05D002541 1.3e-17 92.8 81 53.1
CARHR069370 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.2e-17 92.0 81 49.4
C06p49790 Brassica napus HOM05D002484 ORTHO05D002541 3.7e-17 91.3 81 50.6
BcaB05g24952 Brassica carinata HOM05D002484 ORTHO05D002541 1.9e-16 89.0 81 49.4
BcaC08g47321 Brassica carinata HOM05D002484 ORTHO05D002541 2.4e-16 88.6 81 49.4
Carub.0002s2273 Capsella rubella HOM05D002484 ORTHO05D002541 3.2e-16 88.2 81 49.4
Thhalv10019396m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 4.1e-16 87.8 81 48.1
A02p20270 Brassica napus HOM05D002484 ORTHO05D002541 5.4e-16 87.4 81 49.4
BraA02t07061Z Brassica rapa HOM05D002484 ORTHO05D002541 5.4e-16 87.4 81 49.4
BcaB05g24945 Brassica carinata HOM05D002484 ORTHO05D002541 7.0e-16 87.0 81 49.4
BcaB05g24946 Brassica carinata HOM05D002484 ORTHO05D002541 7.0e-16 87.0 81 49.4
BcaB02g07045 Brassica carinata HOM05D002484 ORTHO05D002541 9.2e-16 86.7 81 46.9
BcaC03g15629 Brassica carinata HOM05D002484 ORTHO05D002541 9.2e-16 86.7 81 48.1
C02p33630 Brassica napus HOM05D002484 ORTHO05D002541 9.2e-16 86.7 81 48.1
BolC2t09341H Brassica oleracea HOM05D002484 ORTHO05D002541 9.2e-16 86.7 81 48.1
A07p41370 Brassica napus HOM05D002484 ORTHO05D002541 1.2e-15 86.3 81 48.1
BolC6t38355H Brassica oleracea HOM05D002484 ORTHO05D002541 1.2e-15 86.3 81 48.1
BraA07t31670Z Brassica rapa HOM05D002484 ORTHO05D002541 1.2e-15 86.3 81 48.1
Carub.0002s2268 Capsella rubella HOM05D002484 ORTHO05D002541 1.2e-15 86.3 81 48.1
Carub.0002s2269 Capsella rubella HOM05D002484 ORTHO05D002541 1.2e-15 86.3 81 48.1
A07p28700 Brassica napus HOM05D002484 ORTHO05D002541 1.6e-15 85.9 81 46.9
BraA07t30510Z Brassica rapa HOM05D002484 ORTHO05D002541 1.6e-15 85.9 81 46.9
A02p20260 Brassica napus HOM05D002484 ORTHO05D002541 2.0e-15 85.5 83 49.4
C02p33640 Brassica napus HOM05D002484 ORTHO05D002541 2.0e-15 85.5 83 49.4
BolC2t09340H Brassica oleracea HOM05D002484 ORTHO05D002541 2.0e-15 85.5 83 49.4
BraA02t07060Z Brassica rapa HOM05D002484 ORTHO05D002541 2.0e-15 85.5 83 49.4
C06p32330 Brassica napus HOM05D002484 ORTHO05D002541 2.7e-15 85.1 81 46.9
Carub.0002s2271 Capsella rubella HOM05D002484 ORTHO05D002541 2.7e-15 85.1 81 48.1
Carub.0002s2272 Capsella rubella HOM05D002484 ORTHO05D002541 2.7e-15 85.1 81 48.1
Carub.0002s2270 Capsella rubella HOM05D002484 ORTHO05D002541 4.6e-15 84.3 81 46.9
AL2G35840 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 6.0e-15 84.0 81 45.7
BcaC03g15628 Brassica carinata HOM05D002484 ORTHO05D002541 6.0e-15 84.0 93 46.2
Thhalv10019397m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 6.0e-15 84.0 81 48.1
AT2G26020 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 7.8e-15 83.6 81 45.7
Carub.0002s2274 Capsella rubella HOM05D002484 ORTHO05D002541 7.8e-15 83.6 81 45.7
AT2G26010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.7e-14 82.4 81 45.7
A07p41390 Brassica napus HOM05D002484 ORTHO05D002541 1.7e-14 82.4 81 48.1
BraA07t31672Z Brassica rapa HOM05D002484 ORTHO05D002541 1.7e-14 82.4 81 48.1
AT5G44430 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 2.3e-14 82.0 81 45.7
CARHR069270 Cardamine hirsuta HOM05D002484 ORTHO05D002541 3.0e-14 81.6 81 46.9
Sp5g30950 Schrenkiella parvula HOM05D002484 ORTHO05D002541 5.0e-14 80.9 81 48.1
CARHR069310 Cardamine hirsuta HOM05D002484 ORTHO05D002541 6.6e-14 80.5 81 44.4
CARHR284300 Cardamine hirsuta HOM05D002484 ORTHO05D002541 6.6e-14 80.5 81 43.2
AT5G44420 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 8.6e-14 80.1 81 43.2
BcaC08g45552 Brassica carinata HOM05D002484 ORTHO05D002541 8.6e-14 80.1 81 46.9
BcaC08g47074 Brassica carinata HOM05D002484 ORTHO05D002541 8.6e-14 80.1 81 43.2
C06p32340 Brassica napus HOM05D002484 ORTHO05D002541 8.6e-14 80.1 81 46.9
AT1G75830 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.1e-13 79.7 81 43.2
Sp5g30970 Schrenkiella parvula HOM05D002484 ORTHO05D002541 2.5e-13 78.6 81 45.7
Thhalv10019395m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 3.3e-13 78.2 81 43.2
Thhalv10019399m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 3.3e-13 78.2 81 46.9
CARHR069280 Cardamine hirsuta HOM05D002484 ORTHO05D002541 4.3e-13 77.8 81 42.0
A07p41360 Brassica napus HOM05D002484 ORTHO05D002541 1.2e-12 76.3 81 42.0
BraA07t31669Z Brassica rapa HOM05D002484 ORTHO05D002541 1.2e-12 76.3 81 42.0
Thhalv10019394m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.2e-12 76.3 81 44.4
BcaB02g07044 Brassica carinata HOM05D002484 ORTHO05D002541 1.6e-12 75.9 81 44.4
Carub.0007s3201 Capsella rubella HOM05D002484 ORTHO05D002541 2.1e-12 75.5 81 44.4
C06p32380 Brassica napus HOM05D002484 ORTHO05D002541 2.8e-12 75.1 81 44.4
BcaC08g45551 Brassica carinata HOM05D002484 ORTHO05D002541 3.6e-12 74.7 81 44.4
Thhalv10019398m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 3.6e-12 74.7 81 44.4
CARHR069250 Cardamine hirsuta HOM05D002484 ORTHO05D002541 4.7e-12 74.3 82 47.6
BcaC08g45554 Brassica carinata HOM05D002484 ORTHO05D002541 6.2e-12 73.9 81 43.2
BcaC08g45556 Brassica carinata HOM05D002484 ORTHO05D002541 6.2e-12 73.9 81 43.2
CARHR216420 Cardamine hirsuta HOM05D002484 ORTHO05D002541 6.2e-12 73.9 81 43.2
Carub.0002s1189 Capsella rubella HOM05D002484 ORTHO05D002541 1.1e-11 73.2 83 42.2
AL1G66200 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 1.2e-10 69.7 82 42.7
Aqoxy5G01512 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 2.0e-10 68.9 81 42.0
Thhalv10000662m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 2.0e-10 68.9 81 40.7
CARHR069320 Cardamine hirsuta HOM05D002484 ORTHO05D002541 5.8e-10 67.4 82 36.6
CARHR069290 Cardamine hirsuta HOM05D002484 ORTHO05D002541 7.5e-10 67.0 81 44.4
CARHR069380 Cardamine hirsuta HOM05D002484 ORTHO05D002541 7.5e-10 67.0 77 39.0
BcaB05g24949 Brassica carinata HOM05D002484 ORTHO05D002541 1.3e-09 66.2 83 42.2
AT1G55010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.7e-09 65.9 82 42.7
Aqoxy4G00457 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 2.2e-09 65.5 81 37.0
AL7G45400 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 2.2e-09 65.5 81 39.5
C02p33860 Brassica napus HOM05D002484 ORTHO05D002541 3.7e-09 64.7 81 42.0
AL2G35830 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 1.9e-08 62.4 65 38.5
CARHR216400 Cardamine hirsuta HOM05D002484 ORTHO05D002541 3.2e-08 61.6 83 43.4
A07p41400 Brassica napus HOM05D002484 ORTHO05D002541 4.1e-08 61.2 81 37.0
BolC2t09321H Brassica oleracea HOM05D002484 ORTHO05D002541 4.1e-08 61.2 81 40.7
Thhalv10000535m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 7.1e-08 60.5 81 38.3
AL1G65590 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 9.2e-08 60.1 82 39.0
Carub.0002s0817 Capsella rubella HOM05D002484 ORTHO05D002541 2.1e-07 58.9 82 42.7
BcaC03g15604 Brassica carinata HOM05D002484 ORTHO05D002541 1.3e-06 56.2 87 35.6
CARHR069260 Cardamine hirsuta HOM05D002484 ORTHO05D002541 8.6e-06 53.5 81 37.0


User provided reference genes

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