Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p03820 Brassica napus HOM05D006785 ORTHO05D006259 2.4e-125 452.6 308 100.0
BolC4t22018H Brassica oleracea HOM05D006785 ORTHO05D006259 1.3e-123 446.8 308 99.0
BraA05t19307Z Brassica rapa HOM05D006785 ORTHO05D006259 1.4e-117 426.8 308 94.8
Sp4g24990 Schrenkiella parvula HOM05D006785 ORTHO05D006259 1.0e-62 244.6 316 60.1
BcaB06g29269 Brassica carinata HOM05D006785 ORTHO05D006259 8.5e-46 188.3 308 46.8
Thhalv10006112m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 2.0e-39 167.2 229 52.4
AT3G58840 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 2.1e-36 157.1 230 48.7
Carub.0005s2562 Capsella rubella HOM05D006785 ORTHO05D006259 4.7e-36 156.0 232 49.1
THA.LOC104802276 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 6.8e-35 152.1 234 45.3
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 2.5e-29 133.7 230 40.9
A05p03170 Brassica napus HOM05D006785 ORTHO05D006259 2.3e-27 127.1 80 90.0
CARHR169250 Cardamine hirsuta HOM05D006785 ORTHO05D006259 4.4e-26 122.9 152 53.9
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 5.8e-26 122.5 227 38.3
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 1.4e-24 117.9 235 36.2
AT1G06530 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 2.4e-24 117.1 230 39.1
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 6.0e-23 112.5 231 36.4
Aa31LG10G13400 Aethionema arabicum HOM05D006785 ORTHO05D006259 6.6e-22 109.0 232 38.8
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 7.3e-21 105.5 236 37.3
MD09G1151900 Malus domestica HOM05D006785 ORTHO05D006259 2.3e-19 100.5 232 37.5
Sp5g04020 Schrenkiella parvula HOM05D006785 ORTHO05D006259 6.8e-19 99.0 153 48.4
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 8.9e-19 98.6 256 30.5
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 8.9e-19 98.6 256 30.5
BcaB02g07495 Brassica carinata HOM05D006785 ORTHO05D006259 1.2e-18 98.2 229 38.9
AL5G40640 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 2.6e-18 97.1 147 50.3
Thhalv10009835m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 7.5e-18 95.5 238 35.3
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 1.3e-17 94.7 232 33.6
A07p24380 Brassica napus HOM05D006785 ORTHO05D006259 1.7e-17 94.4 193 39.9
CiPaw.03G189000 Carya illinoinensis HOM05D006785 ORTHO05D006259 2.2e-17 94.0 233 33.0
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 3.7e-17 93.2 227 33.0
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 2.4e-16 90.5 113 51.3
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 7.0e-16 89.0 263 32.3
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 7.0e-16 89.0 233 34.8
MD17G1139500 Malus domestica HOM05D006785 ORTHO05D006259 1.6e-15 87.8 233 34.3
Lalb_Chr10g0106721 Lupinus albus HOM05D006785 ORTHO05D006259 4.6e-15 86.3 231 32.0
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 7.8e-15 85.5 234 33.8
CARHR006150 Cardamine hirsuta HOM05D006785 ORTHO05D006259 1.0e-14 85.1 110 45.5
MELO3C019688.2 Cucumis melo HOM05D006785 ORTHO05D006259 3.9e-14 83.2 227 31.3
Sed0007746 Sechium edule HOM05D006785 ORTHO05D006259 8.6e-14 82.0 232 31.5
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 2.5e-13 80.5 169 37.9
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 4.3e-13 79.7 227 30.0
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 9.5e-13 78.6 169 37.9
Glyma.02G287000 Glycine max HOM05D006785 ORTHO05D006259 4.7e-12 76.3 231 30.7
Potri.005G201400 Populus trichocarpa HOM05D006785 ORTHO05D006259 6.2e-12 75.9 230 34.3
FAN02G2853 Fragaria x ananassa HOM05D006785 ORTHO05D006259 1.1e-11 75.1 235 32.3
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.1e-11 75.1 226 32.3
Lalb_Chr17g0348301 Lupinus albus HOM05D006785 ORTHO05D006259 2.3e-11 73.9 234 32.5
Gohir.A11G224802 Gossypium hirsutum HOM05D006785 ORTHO05D006259 5.2e-11 72.8 226 32.7
BraA07t30085Z Brassica rapa HOM05D006785 ORTHO05D023842 6.8e-11 72.4 168 39.3
FAN14G2666 Fragaria x ananassa HOM05D006785 ORTHO05D006259 6.8e-11 72.4 234 32.5
Ca_06284_v3 Cicer arietinum L. HOM05D006785 ORTHO05D006259 1.5e-10 71.2 233 30.0
Lalb_Chr05g0211951 Lupinus albus HOM05D006785 ORTHO05D006259 2.0e-10 70.9 199 34.2
Sp1g05290 Schrenkiella parvula HOM05D006785 ORTHO05D006259 2.0e-10 70.9 153 35.3
Cpa.g.sc50.80 Carica papaya HOM05D006785 ORTHO05D006259 3.4e-10 70.1 228 31.1
BcaC08g44946 Brassica carinata HOM05D006785 ORTHO05D023842 9.9e-10 68.6 165 40.6
arahy.Tifrunner.gnm1.ann1.PX2Y9B Arachis hypogaea HOM05D006785 ORTHO05D006259 1.7e-09 67.8 236 32.6
FAN05G2931 Fragaria x ananassa HOM05D006785 ORTHO05D006259 1.7e-09 67.8 235 30.6
Phvul.008G191300 Phaseolus vulgaris HOM05D006785 ORTHO05D006259 2.9e-09 67.0 246 29.7
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 6.4e-09 65.9 102 44.1
arahy.Tifrunner.gnm1.ann1.W4MS3F Arachis hypogaea HOM05D006785 ORTHO05D006259 8.3e-09 65.5 231 31.6
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 8.3e-09 65.5 102 44.1
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 8.3e-09 65.5 102 44.1
Phvul.006G033700 Phaseolus vulgaris HOM05D067041 ORTHO05D020454 8.3e-09 65.5 94 45.7
Haze_13495 Corylus avellana HOM05D006785 ORTHO05D006259 2.4e-08 63.9 234 30.8
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 3.2e-08 63.5 234 29.9
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 3.2e-08 63.5 218 28.0
AL1G16560 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 7.1e-08 62.4 230 31.3
RcHm_v2.0_Chr2g0151481 Rosa chinensis HOM05D006785 ORTHO05D006259 1.2e-07 61.6 234 30.8
Prupe.3G172600 Prunus persica HOM05D006785 ORTHO05D006259 2.1e-07 60.8 235 30.2
Atru.chr6.2094 Acer truncatum HOM05D006785 ORTHO05D006259 3.5e-07 60.1 233 29.6
FAN09G1973 Fragaria x ananassa HOM05D006785 ORTHO05D006259 3.5e-07 60.1 236 29.2
Medtr5g091710 Medicago truncatula HOM05D006785 ORTHO05D006259 3.5e-07 60.1 234 27.8
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 3.5e-07 60.1 255 28.6
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 1.3e-06 58.2 229 29.7
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 1.7e-06 57.8 247 27.9
C05p04790 Brassica napus HOM05D006785 ORTHO05D006259 3.0e-06 57.0 132 33.3
Aa31LG5G5980 Aethionema arabicum HOM05D006785 ORTHO05D006259 3.9e-06 56.6 231 28.6
Glyma.14G027900 Glycine max HOM05D006785 ORTHO05D006259 8.6e-06 55.5 231 28.1


User provided reference genes

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