Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p02540 Brassica napus HOM05D001285 ORTHO05D021957 7.9e-31 136.3 63 100.0
BolC4t21897H Brassica oleracea HOM05D001285 ORTHO05D021957 7.9e-31 136.3 63 100.0
BcaC02g12762 Brassica carinata HOM05D001285 ORTHO05D021957 2.3e-30 134.8 63 98.4
BraA05t19209Z Brassica rapa HOM05D001285 ORTHO05D021957 4.0e-27 124.0 63 90.5
BcaC05g30530 Brassica carinata HOM05D001285 ORTHO05D000199 6.0e-23 110.2 63 84.1
BcaNung03065 Brassica carinata HOM05D001285 ORTHO05D000199 2.3e-22 108.2 55 90.9
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 6.7e-22 106.7 55 89.1
BolC5t32603H Brassica oleracea HOM05D001285 ORTHO05D021957 6.7e-22 106.7 55 89.1
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 2.5e-21 104.8 55 89.1
C03p03120 Brassica napus HOM05D001285 ORTHO05D000199 1.2e-18 95.9 53 79.2
BcaC05g25966 Brassica carinata HOM05D001285 ORTHO05D000199 1.1e-16 89.4 46 87.0
C05p38640 Brassica napus HOM05D001285 ORTHO05D000199 7.2e-16 86.7 42 92.9
BolC4t23605H Brassica oleracea HOM05D001285 ORTHO05D000199 1.0e-14 82.8 46 80.4
BcaC02g11078 Brassica carinata HOM05D001285 ORTHO05D000199 3.0e-14 81.3 46 80.4
BcaC08g44187 Brassica carinata HOM05D001285 ORTHO05D000199 2.0e-10 68.6 37 81.1
C06p15920 Brassica napus HOM05D001285 ORTHO05D000199 2.0e-10 68.6 37 81.1
BcaC07g38661 Brassica carinata HOM05D001285 ORTHO05D000199 2.9e-09 64.7 42 69.0
A02p36790 Brassica napus HOM05D001285 ORTHO05D000199 2.9e-09 64.7 42 66.7
C02p49790 Brassica napus HOM05D001285 ORTHO05D000199 2.9e-09 64.7 42 69.0
C09p65970 Brassica napus HOM05D001285 ORTHO05D000199 2.9e-09 64.7 42 66.7
BolC9t59420H Brassica oleracea HOM05D001285 ORTHO05D000199 2.9e-09 64.7 42 66.7
BraA02t08671Z Brassica rapa HOM05D001285 ORTHO05D000199 2.9e-09 64.7 42 66.7
A10p10700 Brassica napus HOM05D001285 ORTHO05D000199 8.5e-09 63.2 49 59.2
BcaB01g00219 Brassica carinata HOM05D001285 ORTHO05D000199 4.2e-08 60.8 40 67.5
BcaC03g17776 Brassica carinata HOM05D001285 ORTHO05D000199 4.2e-08 60.8 42 61.9
BcaC08g43423 Brassica carinata HOM05D001285 ORTHO05D000199 4.2e-08 60.8 40 67.5
C02p57920 Brassica napus HOM05D001285 ORTHO05D000199 4.2e-08 60.8 42 61.9
BolC6t35851H Brassica oleracea HOM05D001285 ORTHO05D000199 4.2e-08 60.8 40 67.5
BcaB06g28698 Brassica carinata HOM05D001285 ORTHO05D000199 5.5e-08 60.5 40 67.5
C02p29930 Brassica napus HOM05D001285 ORTHO05D000199 5.5e-08 60.5 40 67.5
BolC2t11860H Brassica oleracea HOM05D001285 ORTHO05D000199 5.5e-08 60.5 42 61.9
BcaB03g15494 Brassica carinata HOM05D001285 ORTHO05D000199 7.2e-08 60.1 40 67.5
A06p22000 Brassica napus HOM05D001285 ORTHO05D000199 7.2e-08 60.1 40 67.5
C03p36960 Brassica napus HOM05D001285 ORTHO05D000199 7.2e-08 60.1 40 67.5
C03p37020 Brassica napus HOM05D001285 ORTHO05D000199 7.2e-08 60.1 40 67.5
Carub.0006s2659 Capsella rubella HOM05D001285 ORTHO05D000199 7.2e-08 60.1 42 57.1
BcaC03g14913 Brassica carinata HOM05D001285 ORTHO05D000199 9.4e-08 59.7 40 65.0
A10p12140 Brassica napus HOM05D001285 ORTHO05D000199 9.4e-08 59.7 40 65.0
C02p23920 Brassica napus HOM05D001285 ORTHO05D000199 9.4e-08 59.7 40 65.0
C08p09430 Brassica napus HOM05D004489 ORTHO05D000199 9.4e-08 59.7 51 45.1
BraA05t21432Z Brassica rapa HOM05D001285 ORTHO05D000199 9.4e-08 59.7 40 67.5
CARHR032540 Cardamine hirsuta HOM05D001285 ORTHO05D021957 9.4e-08 59.7 37 67.6
C06p12830 Brassica napus HOM05D001285 ORTHO05D000199 1.2e-07 59.3 48 50.0
C07p23590 Brassica napus HOM05D001285 ORTHO05D000199 1.6e-07 58.9 46 54.3
AL1G60090 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.1e-07 58.5 41 61.0
AL5G16910 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.1e-07 58.5 41 58.5
BcaNung01892 Brassica carinata HOM05D003576 ORTHO05D000199 2.7e-07 58.2 30 83.3
AL3G40680 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 3.6e-07 57.8 41 56.1
AT5G45570 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 3.6e-07 57.8 41 56.1
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 3.6e-07 57.8 47 48.9
Carub.0006s2832 Capsella rubella HOM05D001285 ORTHO05D000199 3.6e-07 57.8 42 52.4
CARHR260230 Cardamine hirsuta HOM05D001285 ORTHO05D000199 3.6e-07 57.8 40 62.5
BcaC01g02097 Brassica carinata HOM05D001285 ORTHO05D039944 4.6e-07 57.4 35 71.4
C03p68510 Brassica napus HOM05D001285 ORTHO05D039944 4.6e-07 57.4 35 71.4
C09p20890 Brassica napus HOM05D001285 ORTHO05D000199 4.6e-07 57.4 41 56.1
Carub.0005s0342 Capsella rubella HOM05D001285 ORTHO05D000199 4.6e-07 57.4 40 62.5
Thhalv10002866m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.1e-07 57.0 42 52.4
BcaB02g11283 Brassica carinata HOM05D001285 ORTHO05D000199 7.9e-07 56.6 41 61.0
BolC1t02405H Brassica oleracea HOM05D001285 ORTHO05D000199 7.9e-07 56.6 40 65.0
BraA09t37769Z Brassica rapa HOM05D001285 ORTHO05D000199 7.9e-07 56.6 49 55.1
CARHR104030 Cardamine hirsuta HOM05D001285 ORTHO05D000199 7.9e-07 56.6 38 60.5
AL1G51180 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.0e-06 56.2 41 58.5
AL3G30210 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.0e-06 56.2 41 58.5
AL4G17640 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.0e-06 56.2 41 58.5
BcaC04g20925 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-06 55.8 40 60.0
BolC2t07252H Brassica oleracea HOM05D001285 ORTHO05D000199 1.4e-06 55.8 40 60.0
BraA01t02157Z Brassica rapa HOM05D001285 ORTHO05D000199 1.4e-06 55.8 40 60.0
BraA03t11415Z Brassica rapa HOM05D001285 ORTHO05D000199 1.4e-06 55.8 40 60.0
BraA07t28518Z Brassica rapa HOM05D001285 ORTHO05D000199 1.4e-06 55.8 40 60.0
AL3G45900 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.8e-06 55.5 40 57.5
AL6G40760 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.8e-06 55.5 40 57.5
AL8G24550 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.8e-06 55.5 62 48.4
BcaC06g30937 Brassica carinata HOM05D001285 ORTHO05D000199 1.8e-06 55.5 42 57.1
C05p42600 Brassica napus HOM05D004489 ORTHO05D000199 1.8e-06 55.5 38 57.9
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-06 55.5 41 53.7
BcaB02g07816 Brassica carinata HOM05D001285 ORTHO05D000199 2.3e-06 55.1 50 48.0
C05p11680 Brassica napus HOM05D001285 ORTHO05D000199 2.3e-06 55.1 42 61.9
C06p24190 Brassica napus HOM05D001285 ORTHO05D000199 2.3e-06 55.1 42 57.1
BolC5t29915H Brassica oleracea HOM05D001285 ORTHO05D000199 2.3e-06 55.1 42 61.9
Carub.0004s0683 Capsella rubella HOM05D001285 ORTHO05D000199 2.3e-06 55.1 38 55.3
BcaB03g15573 Brassica carinata HOM05D001285 ORTHO05D000199 3.0e-06 54.7 42 57.1
BolC3t18090H Brassica oleracea HOM05D001285 ORTHO05D028153 3.0e-06 54.7 36 69.4
BolC8t49093H Brassica oleracea HOM05D001285 ORTHO05D028153 3.0e-06 54.7 36 69.4
AL6G42160 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 3.9e-06 54.3 40 55.0
AL3G44710 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 5.1e-06 53.9 40 55.0
C05p19190 Brassica napus HOM05D001285 ORTHO05D000199 5.1e-06 53.9 31 80.6
C08p11380 Brassica napus HOM05D001285 ORTHO05D000199 5.1e-06 53.9 46 50.0
BolC5t30619H Brassica oleracea HOM05D001285 ORTHO05D000199 5.1e-06 53.9 31 80.6
AL4G20190 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 6.7e-06 53.5 40 55.0
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 6.7e-06 53.5 41 51.2
Carub.0004s0691 Capsella rubella HOM05D001285 ORTHO05D000199 6.7e-06 53.5 55 45.5
A05p21700 Brassica napus HOM05D001285 ORTHO05D000199 8.8e-06 53.1 36 55.6
C06p26050 Brassica napus HOM05D001285 ORTHO05D000199 8.8e-06 53.1 49 42.9
C09p23470 Brassica napus HOM05D001285 ORTHO05D000199 8.8e-06 53.1 41 51.2


User provided reference genes

Program Settings