Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p89920 Brassica napus HOM05D002268 ORTHO05D006937 3.7e-293 1010.7 493 100.0
BolC3t21311H Brassica oleracea HOM05D002268 ORTHO05D006937 3.7e-293 1010.7 493 100.0
BcaC01g01260 Brassica carinata HOM05D002268 ORTHO05D006937 8.5e-290 999.6 493 98.6
A08p02940 Brassica napus HOM05D002268 ORTHO05D006937 8.3e-277 956.4 493 94.7
BraA08t32327Z Brassica rapa HOM05D002268 ORTHO05D006937 2.3e-274 948.3 494 94.3
Sp1g37990 Schrenkiella parvula HOM05D002268 ORTHO05D006937 2.3e-258 895.2 500 88.0
BcaB02g11231 Brassica carinata HOM05D002268 ORTHO05D006937 1.2e-256 889.4 496 88.9
AT1G51310 Arabidopsis thaliana HOM05D002268 ORTHO05D006937 2.3e-250 868.6 501 86.0
Carub.0001s4017 Capsella rubella HOM05D002268 ORTHO05D006937 5.1e-250 867.5 500 85.6
AL1G59110 Arabidopsis lyrata HOM05D002268 ORTHO05D006937 1.1e-249 866.3 504 85.9
CARHR041380 Cardamine hirsuta HOM05D002268 ORTHO05D006937 7.3e-249 863.6 502 85.7
Thhalv10011432m.g Eutrema salsugineum HOM05D002268 ORTHO05D006937 6.2e-248 860.5 500 85.6
Carub.0008s0647 Capsella rubella HOM05D002268 ORTHO05D006937 5.2e-247 857.4 499 85.2
Aa31LG10G3500 Aethionema arabicum HOM05D002268 ORTHO05D006937 6.4e-237 823.9 497 81.3
A05p19700 Brassica napus HOM05D002268 ORTHO05D006937 3.0e-218 761.9 452 84.7
Ca_11284_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 7.9e-203 710.7 411 81.8
Ca_30227_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 7.9e-203 710.7 411 81.8
QL01p004788 Quercus lobata HOM05D002268 ORTHO05D006937 1.4e-202 709.9 495 71.5
COL.COLO4_24897 Corchorus olitorius HOM05D002268 ORTHO05D006937 7.4e-201 704.1 485 71.3
BolC5t32017H Brassica oleracea HOM05D002268 ORTHO05D006937 4.8e-200 701.4 509 73.1
Gorai.009G073000 Gossypium raimondii HOM05D002268 ORTHO05D006937 6.9e-199 697.6 484 70.7
Lalb_Chr19g0138111 Lupinus albus HOM05D002268 ORTHO05D006937 2.9e-197 692.2 415 79.3
Sc16g0011510 Simmondsia chinensis HOM05D002268 ORTHO05D006937 2.9e-197 692.2 407 80.1
arahy.Tifrunner.gnm1.ann1.02894U Arachis hypogaea HOM05D002268 ORTHO05D006937 3.8e-197 691.8 480 72.7
arahy.Tifrunner.gnm1.ann1.8VL3CN Arachis hypogaea HOM05D002268 ORTHO05D006937 3.8e-197 691.8 480 72.9
Psat7g212760 Pisum sativum HOM05D002268 ORTHO05D006937 3.8e-197 691.8 451 73.8
Cpa.g.sc84.62 Carica papaya HOM05D002268 ORTHO05D006937 5.0e-197 691.4 460 73.3
Potri.001G259000 Populus trichocarpa HOM05D002268 ORTHO05D006937 8.5e-197 690.6 506 68.6
MELO3C014598.2 Cucumis melo HOM05D002268 ORTHO05D006937 1.1e-196 690.3 409 79.5
Ah.04g161910 Amaranthus hybridus HOM05D002268 ORTHO05D006937 1.4e-196 689.9 475 72.8
GSVIVG01025274001 Vitis vinifera HOM05D002268 ORTHO05D006937 1.4e-196 689.9 411 79.6
Lj3g0006923 Lotus japonicus HOM05D002268 ORTHO05D006937 1.9e-196 689.5 458 73.4
CsaV3_4G024220 Cucumis sativus L. HOM05D002268 ORTHO05D006937 2.5e-196 689.1 460 73.9
Duzib168G2040 Durio zibethinus HOM05D002268 ORTHO05D006937 2.5e-196 689.1 431 75.4
MD03G1176400 Malus domestica HOM05D002268 ORTHO05D006937 3.2e-196 688.7 425 77.2
Phvul.011G059600 Phaseolus vulgaris HOM05D002268 ORTHO05D006937 4.2e-196 688.3 457 73.5
Haze_23130 Corylus avellana HOM05D002268 ORTHO05D006937 5.5e-196 688.0 477 71.7
Glyma.11G133500 Glycine max HOM05D002268 ORTHO05D006937 9.4e-196 687.2 435 75.9
arahy.Tifrunner.gnm1.ann1.6XYC84 Arachis hypogaea HOM05D002268 ORTHO05D006937 1.2e-195 686.8 488 71.9
Prupe.5G028600 Prunus persica HOM05D002268 ORTHO05D006937 2.7e-195 685.6 476 71.6
TWI60G0297 Tripterygium wilfordii HOM05D002268 ORTHO05D006937 2.7e-195 685.6 486 70.4
arahy.Tifrunner.gnm1.ann1.VSBS4R Arachis hypogaea HOM05D002268 ORTHO05D006937 3.6e-195 685.3 480 72.3
EL10Ac4g10259 Beta vulgaris HOM05D002268 ORTHO05D006937 3.6e-195 685.3 441 75.1
EL10Ac4g10275 Beta vulgaris HOM05D002268 ORTHO05D006937 3.6e-195 685.3 441 75.1
Gohir.D05G072000 Gossypium hirsutum HOM05D002268 ORTHO05D006937 3.6e-195 685.3 484 69.2
Atru.chr3.2733 Acer truncatum HOM05D002268 ORTHO05D006937 4.7e-195 684.9 501 69.3
arahy.Tifrunner.gnm1.ann1.AYE0CN Arachis hypogaea HOM05D002268 ORTHO05D006937 2.3e-194 682.6 486 71.4
AUR62019294 Chenopodium quinoa HOM05D002268 ORTHO05D006937 5.1e-194 681.4 404 79.5
Nitab4.5_0006994g0060 Nicotiana tabacum HOM05D002268 ORTHO05D006937 8.8e-194 680.6 466 71.0
BcaC05g27353 Brassica carinata HOM05D002268 ORTHO05D006937 1.5e-193 679.9 361 90.0
CiPaw.14G119300 Carya illinoinensis HOM05D002268 ORTHO05D006937 3.3e-193 678.7 505 67.1
Nitab4.5_0005819g0070 Nicotiana tabacum HOM05D002268 ORTHO05D006937 3.3e-193 678.7 460 72.2
Sopen09g028920 Solanum pennellii HOM05D002268 ORTHO05D006937 3.3e-193 678.7 470 70.9
Sed0017829 Sechium edule HOM05D002268 ORTHO05D006937 9.7e-193 677.2 422 75.4
VMungo1127G0743 Vigna mungo HOM05D002268 ORTHO05D006937 9.7e-193 677.2 448 73.7
Solyc09g074100.4 Solanum lycopersicum HOM05D002268 ORTHO05D006937 1.3e-192 676.8 470 70.6
CAN.G956.10 Capsicum annuum HOM05D002268 ORTHO05D006937 1.7e-192 676.4 466 70.0
Medtr4g065023 Medicago truncatula HOM05D002268 ORTHO05D006937 1.7e-192 676.4 412 78.9
ClCG02G023280 Citrullus lanatus HOM05D002268 ORTHO05D006937 2.2e-192 676.0 451 72.5
Rhsim01G0191500 Rhododendron simsii HOM05D002268 ORTHO05D006937 2.2e-192 676.0 452 73.5
PGSC0003DMG400003844 Solanum tuberosum HOM05D002268 ORTHO05D006937 2.2e-192 676.0 466 70.6
Nn7g36125 Nelumbo nucifera HOM05D002268 ORTHO05D006937 6.3e-192 674.5 474 70.9
DCAR_000723 Daucus carota HOM05D002268 ORTHO05D006937 1.4e-191 673.3 441 72.8
Eucgr.B03681 Eucalyptus grandis HOM05D002268 ORTHO05D006937 2.4e-191 672.5 406 78.8
MD11G1196700 Malus domestica HOM05D002268 ORTHO05D006937 3.1e-191 672.2 499 68.3
PGR102G0832 Punica granatum HOM05D002268 ORTHO05D006937 4.1e-191 671.8 422 75.4
HanXRQChr07g0197481 Helianthus annuus HOM05D002268 ORTHO05D006937 9.1e-191 670.6 468 70.5
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 9.1e-191 670.6 456 73.2
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 1.0e-189 667.2 411 77.1
Lj2A631G13 Lonicera japonica HOM05D002268 ORTHO05D006937 2.2e-189 666.0 439 72.4
Aqoxy1G00300 Aquilegia oxysepala HOM05D002268 ORTHO05D006937 2.9e-189 665.6 473 69.6
Cc09_g04150 Coffea canephora HOM05D002268 ORTHO05D006937 1.1e-188 663.7 423 74.9
Migut.N02313 Erythranthe guttata HOM05D002268 ORTHO05D006937 2.5e-188 662.5 406 76.8
ECA238G2081 Erigeron canadensis HOM05D002268 ORTHO05D006937 7.2e-188 661.0 411 75.9
TPR.G35035 Trifolium pratense HOM05D002268 ORTHO05D006937 2.7e-187 659.1 420 75.7
Lsat_1_v5_gn_2_97721 Lactuca sativa HOM05D002268 ORTHO05D006937 8.0e-187 657.5 491 66.0
C05p32860 Brassica napus HOM05D002268 ORTHO05D006937 2.3e-186 656.0 488 71.7
PSO384G3396 Papaver somniferum HOM05D002268 ORTHO05D006937 5.2e-186 654.8 408 75.7
HPP92_009580 Vanilla planifolia HOM05D002268 ORTHO05D006937 3.3e-185 652.1 476 66.0
PSO339G2995 Papaver somniferum HOM05D002268 ORTHO05D006937 4.4e-185 651.7 448 71.7
SalBow5G0100 Salvia bowleyana HOM05D002268 ORTHO05D006937 3.7e-184 648.7 495 65.9
Actinidia06337 Actinidia chinensis HOM05D002268 ORTHO05D006937 1.0e-181 640.6 393 76.8
RcHm_v2.0_Chr7g0231131 Rosa chinensis HOM05D002268 ORTHO05D006937 1.7e-181 639.8 488 66.8
AUR62000114 Chenopodium quinoa HOM05D002268 ORTHO05D006937 2.9e-181 639.0 452 69.0
Oeu043297.4 Olea europaea HOM05D002268 ORTHO05D006937 3.8e-181 638.6 484 65.7
FAN18G3947 Fragaria x ananassa HOM05D002268 ORTHO05D006937 3.2e-180 635.6 416 73.3
FvH4_5g33050 Fragaria vesca HOM05D002268 ORTHO05D006937 1.6e-179 633.3 410 74.1
Sabra16G0158600 Salix brachista HOM05D002268 ORTHO05D006937 5.2e-178 628.2 489 66.1
Manes.06G165000 Manihot esculenta HOM05D002268 ORTHO05D006937 4.4e-177 625.2 490 66.9
MBI04_g17077_MAGBIO Magnolia biondii HOM05D002268 ORTHO05D006937 5.7e-177 624.8 467 66.2
ATR0605G089 Amborella trichopoda HOM05D002268 ORTHO05D006937 9.7e-177 624.0 394 73.6
Os03g0174600 Oryza sativa ssp. japonica HOM05D002268 ORTHO05D006937 1.1e-175 620.5 484 63.8
Zm00001eb005670 Zea mays HOM05D002268 ORTHO05D006937 5.3e-175 618.2 413 68.8
CSS0013347 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 2.2e-168 596.3 369 76.2
SGA_v2.0_scaffold42G16104 Striga asiatica HOM05D002268 ORTHO05D006937 4.8e-168 595.1 495 61.2
Hund22033 Selenicereus undatus HOM05D002268 ORTHO05D006937 6.1e-163 578.2 629 52.5
CDE04G2511 Ceratophyllum demersum HOM05D002268 ORTHO05D006937 7.5e-161 571.2 478 62.1
Thecc.09G232700 Theobroma cacao HOM05D002268 ORTHO05D006937 2.7e-158 562.8 377 72.1
Lsat_1_v5_gn_2_132680 Lactuca sativa HOM05D002268 ORTHO05D006937 7.3e-156 554.7 395 67.3
CSS0030827 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 7.8e-142 508.1 441 59.6
Pp3c15_1840 Physcomitrium patens HOM05D002268 ORTHO05D006937 1.3e-136 490.7 406 60.1
SEGI_13867 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 1.9e-135 486.9 344 67.2
Mapoly0129s0019 Marchantia polymorpha HOM05D002268 ORTHO05D006937 5.4e-135 485.3 430 57.0
SMO331G0070 Selaginella moellendorffii HOM05D002268 ORTHO05D006937 1.7e-133 480.3 376 61.4
AagrBONN_evm.TU.Sc2ySwM_340.361 Anthoceros agrestis HOM05D002268 ORTHO05D006937 4.3e-132 475.7 416 57.2
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 4.0e-130 469.2 273 81.3
Dinv22182 Davidia involucrata HOM05D002268 ORTHO05D006937 5.2e-130 468.8 262 82.4
Ciclev10006706m.g Citrus clementina HOM05D002268 ORTHO05D006937 1.9e-124 450.3 486 54.3
Glyma.12G057700 Glycine max HOM05D002268 ORTHO05D006937 2.6e-121 439.9 253 82.2
TAR369G0718 Trochodendron aralioides HOM05D002268 ORTHO05D006937 1.9e-119 433.7 261 78.2
FAN08G3580 Fragaria x ananassa HOM05D002268 ORTHO05D006937 6.0e-118 428.7 266 76.7
MCO02G416 Micromonas commoda HOM05D002268 ORTHO05D006937 6.9e-114 415.2 433 49.4
PRCOL_00001138 Prasinoderma coloniale HOM05D002268 ORTHO05D006937 1.5e-113 414.1 379 55.1
Peaxi162Scf00004g00224 Petunia axillaris HOM05D002268 ORTHO05D006937 1.0e-109 401.4 249 74.3
FAN04G1610 Fragaria x ananassa HOM05D002268 ORTHO05D006937 3.9e-109 399.4 344 60.8
Cre14.g628000 Chlamydomonas reinhardtii HOM05D002268 ORTHO05D006937 7.9e-102 375.2 529 41.4
AagrBONN_evm.TU.Sc2ySwM_368.606 Anthoceros agrestis HOM05D002268 ORTHO05D006937 3.0e-101 373.2 378 51.9
Actinidia26439 Actinidia chinensis HOM05D002268 ORTHO05D006937 5.5e-95 352.4 232 73.3
CBR_g40742 Chara braunii HOM05D002268 ORTHO05D006937 2.4e-90 337.0 264 64.0
Gohir.A05G069100 Gossypium hirsutum HOM05D002268 ORTHO05D006937 6.5e-88 328.9 277 61.7
BcaB04g17220 Brassica carinata HOM05D002268 ORTHO05D006937 8.5e-88 328.6 171 91.2
unitig_21.g20901 Utricularia gibba HOM05D002268 ORTHO05D006937 2.6e-68 263.8 161 77.0
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 6.3e-67 259.2 205 59.5
BcaC01g01262 Brassica carinata HOM05D002268 ORTHO05D006937 4.5e-65 253.1 282 51.8
C03p89950 Brassica napus HOM05D002268 ORTHO05D001336 2.7e-62 243.8 177 70.6
BolC3t21314H Brassica oleracea HOM05D002268 ORTHO05D006937 1.2e-57 228.4 177 67.2
BraA05t20874Z Brassica rapa HOM05D002268 ORTHO05D006937 2.5e-55 220.7 157 77.1
Pp3c4_6690 Physcomitrium patens HOM05D002268 ORTHO05D021278 4.4e-52 209.9 422 31.8
MSTRG.17590 Avicennia marina HOM05D002268 ORTHO05D006937 1.7e-51 208.0 231 55.0
CBR_g19922 Chara braunii HOM05D002268 ORTHO05D021278 2.4e-50 204.1 310 36.8
Hma1.2p1_0861F.1_g229720 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 2.4e-50 204.1 138 69.6
AagrBONN_evm.TU.Sc2ySwM_117.3752 Anthoceros agrestis HOM05D002268 ORTHO05D021278 1.1e-47 195.3 291 38.1
CSS0037797 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 9.8e-44 182.2 112 74.1
PRCOL_00001597 Prasinoderma coloniale HOM05D002268 ORTHO05D021278 1.4e-42 178.3 399 31.1
Mapoly0010s0199 Marchantia polymorpha HOM05D002268 ORTHO05D021278 9.2e-42 175.6 346 33.5
SEGI_07269 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 5.0e-40 169.9 143 60.8
MCO12G105 Micromonas commoda HOM05D002268 ORTHO05D021278 2.5e-39 167.5 296 37.5
C03p89940 Brassica napus HOM05D002268 ORTHO05D040778 8.3e-35 152.5 114 72.8
BolC3t21313H Brassica oleracea HOM05D002268 ORTHO05D040778 1.0e-32 145.6 110 72.7
Lsat_1_v5_gn_1_117501 Lactuca sativa HOM05D002268 ORTHO05D006937 4.3e-31 140.2 74 78.4
A08p02920 Brassica napus HOM05D002268 ORTHO05D099342 1.6e-25 121.7 95 65.3
MELO3C029180.2 Cucumis melo HOM05D002268 ORTHO05D168145 1.1e-23 115.5 255 34.9
SEGI_39418 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 8.9e-21 105.9 101 51.5
Nn3g21873 Nelumbo nucifera HOM05D002268 ORTHO05D006937 1.2e-20 105.5 91 61.5
Duzib150G1137 Durio zibethinus HOM05D002268 ORTHO05D006937 1.9e-15 88.2 102 52.9
C01p11650 Brassica napus HOM05D026831 ORTHO05D011195 1.8e-13 81.6 97 48.5
C02p10780 Brassica napus HOM05D002268 ORTHO05D042165 3.1e-13 80.9 107 43.9
BolC2t12207H Brassica oleracea HOM05D002268 ORTHO05D042165 5.2e-13 80.1 138 40.6
MELO3C032733.2 Cucumis melo HOM05D002268 ORTHO05D170637 1.5e-12 78.6 108 45.4
Actinidia23968 Actinidia chinensis HOM05D002268 ORTHO05D006937 3.0e-08 64.3 49 69.4
MELO3C035704.2 Cucumis melo HOM05D002268 ORTHO05D166817 8.7e-08 62.8 143 30.1
QL06p040831 Quercus lobata HOM05D002268 ORTHO05D006937 3.6e-06 57.4 28 85.7


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