Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p87470 Brassica napus HOM05D039094 ORTHO05D023987 1.4e-109 399.8 230 100.0
BolC3t21065H Brassica oleracea HOM05D039094 ORTHO05D023987 1.4e-109 399.8 230 100.0
BcaC01g01046 Brassica carinata HOM05D000555 ORTHO05D023987 3.1e-48 196.1 163 74.8
A08p18400 Brassica napus HOM05D000555 ORTHO05D023987 6.8e-48 194.9 230 59.6
BraA08t33801Z Brassica rapa HOM05D000555 ORTHO05D023987 3.4e-47 192.6 231 59.7
AT4G31880 Arabidopsis thaliana HOM05D000555 ORTHO05D000646 1.3e-17 94.4 119 52.1
AL7G20060 Arabidopsis lyrata HOM05D000555 ORTHO05D000646 6.2e-17 92.0 123 48.0
Sp7g29700 Schrenkiella parvula HOM05D000555 ORTHO05D000646 3.1e-16 89.7 242 37.6
BcaC01g01047 Brassica carinata HOM05D039094 ORTHO05D094056 5.3e-16 89.0 58 91.4
Thhalv10024366m.g Eutrema salsugineum HOM05D000555 ORTHO05D000646 3.8e-14 82.8 241 35.7
A01p06370 Brassica napus HOM05D000555 ORTHO05D000646 4.9e-14 82.4 195 38.5
BcaC09g51979 Brassica carinata HOM05D000555 ORTHO05D000646 6.4e-14 82.0 208 37.0
BcaNung03120 Brassica carinata HOM05D000555 ORTHO05D000646 6.4e-14 82.0 207 36.7
C01p07030 Brassica napus HOM05D000555 ORTHO05D000646 6.4e-14 82.0 208 37.0
BolC1t00697H Brassica oleracea HOM05D000555 ORTHO05D000646 8.4e-14 81.6 197 38.1
CARHR239810 Cardamine hirsuta HOM05D000555 ORTHO05D000646 1.9e-13 80.5 180 38.3
Dinv40984 Davidia involucrata HOM05D000555 ORTHO05D000646 4.2e-13 79.3 114 45.6
BraA01t00602Z Brassica rapa HOM05D000555 ORTHO05D000646 9.3e-13 78.2 240 34.6
Aa31LG2G18210 Aethionema arabicum HOM05D000555 ORTHO05D000646 1.6e-12 77.4 121 46.3
AL7G20420 Arabidopsis lyrata HOM05D000555 ORTHO05D000646 7.9e-12 75.1 169 36.7
C07p58970 Brassica napus HOM05D000555 ORTHO05D000646 3.0e-11 73.2 219 35.6
BolC7t46344H Brassica oleracea HOM05D000555 ORTHO05D000646 3.9e-11 72.8 220 36.4
Lj7A732T27 Lonicera japonica HOM05D000555 ORTHO05D000646 6.7e-11 72.0 114 43.0
TAR636G1427 Trochodendron aralioides HOM05D000555 ORTHO05D000646 8.7e-11 71.6 118 41.5
GSVIVG01035890001 Vitis vinifera HOM05D000555 ORTHO05D000646 1.1e-10 71.2 120 41.7
Carub.0007s0866 Capsella rubella HOM05D000555 ORTHO05D000646 1.5e-10 70.9 247 32.4
Manes.03G010000 Manihot esculenta HOM05D000555 ORTHO05D000646 1.5e-10 70.9 107 43.0
Haze_21428 Corylus avellana HOM05D000555 ORTHO05D000646 1.9e-10 70.5 108 43.5
ClCG08G013680 Citrullus lanatus HOM05D000555 ORTHO05D000646 3.3e-10 69.7 108 41.7
CsaV3_2G032450 Cucumis sativus L. HOM05D000555 ORTHO05D000646 3.3e-10 69.7 108 41.7
Hma1.2p1_0059F.1_g032630 Hydrangea macrophylla HOM05D000555 ORTHO05D000646 3.3e-10 69.7 114 37.7
Psat5g043920 Pisum sativum HOM05D000555 ORTHO05D000646 5.6e-10 68.9 108 40.7
TAR625G0860 Trochodendron aralioides HOM05D000555 ORTHO05D000646 5.6e-10 68.9 109 42.2
Cpa.g.sc127.21 Carica papaya HOM05D000555 ORTHO05D000646 9.6e-10 68.2 108 42.6
MELO3C011294.2 Cucumis melo HOM05D000555 ORTHO05D000646 9.6e-10 68.2 108 40.7
Nitab4.5_0000254g0210 Nicotiana tabacum HOM05D000555 ORTHO05D000646 9.6e-10 68.2 117 41.0
THA.LOC104803856 Tarenaya hassleriana HOM05D000555 ORTHO05D000646 2.1e-09 67.0 259 34.0
PSO339G4429 Papaver somniferum HOM05D000555 ORTHO05D000646 2.8e-09 66.6 107 42.1
TAR383G0993 Trochodendron aralioides HOM05D000555 ORTHO05D000646 2.8e-09 66.6 108 39.8
A03p61100 Brassica napus HOM05D000555 ORTHO05D000646 3.7e-09 66.2 231 34.2
Ah.10g035500 Amaranthus hybridus HOM05D000555 ORTHO05D000646 4.8e-09 65.9 93 39.8
Duzib187G0516 Durio zibethinus HOM05D000555 ORTHO05D000646 4.8e-09 65.9 158 36.7
Rhsim02G0215600 Rhododendron simsii HOM05D000555 ORTHO05D000646 4.8e-09 65.9 114 40.4
vmacro11258 Vaccinium macrocarpon HOM05D000555 ORTHO05D000646 4.8e-09 65.9 114 39.5
Aa31sc233G80 Aethionema arabicum HOM05D000555 ORTHO05D000646 8.1e-09 65.1 246 30.1
CSS0009323 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D000646 8.1e-09 65.1 114 39.5
CSS0042939 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D000646 8.1e-09 65.1 114 39.5
Cc08_g00030 Coffea canephora HOM05D000555 ORTHO05D000646 1.1e-08 64.7 117 38.5
PSO384G0838 Papaver somniferum HOM05D000555 ORTHO05D000646 1.1e-08 64.7 107 40.2
QL05p035479 Quercus lobata HOM05D000555 ORTHO05D000646 1.4e-08 64.3 107 37.4
Hund19590 Selenicereus undatus HOM05D000555 ORTHO05D000646 1.4e-08 64.3 108 39.8
Thecc.06G040400 Theobroma cacao HOM05D000555 ORTHO05D000646 1.4e-08 64.3 108 38.9
Thecc.09G016900 Theobroma cacao HOM05D000555 ORTHO05D000646 1.4e-08 64.3 183 31.1
Lalb_Chr14g0361791 Lupinus albus HOM05D000555 ORTHO05D000646 1.8e-08 63.9 115 37.4
Gohir.D05G060700 Gossypium hirsutum HOM05D000555 ORTHO05D000646 2.4e-08 63.5 216 34.7
Nn2g12328 Nelumbo nucifera HOM05D000555 ORTHO05D000646 2.4e-08 63.5 108 39.8
CiPaw.01G254100 Carya illinoinensis HOM05D000555 ORTHO05D000646 3.1e-08 63.2 108 38.9
DCAR_022853 Daucus carota HOM05D000555 ORTHO05D000646 3.1e-08 63.2 114 37.7
Gohir.A05G058600 Gossypium hirsutum HOM05D000555 ORTHO05D000646 3.1e-08 63.2 216 34.7
MBI15_g07758_MAGBIO Magnolia biondii HOM05D000555 ORTHO05D000646 3.1e-08 63.2 108 40.7
Duzib150G0742 Durio zibethinus HOM05D000555 ORTHO05D000646 5.3e-08 62.4 200 33.5
TWI63G1562 Tripterygium wilfordii HOM05D000555 ORTHO05D000646 5.3e-08 62.4 106 40.6
HanXRQChr13g0413351 Helianthus annuus HOM05D000555 ORTHO05D000646 9.0e-08 61.6 117 38.5
HanXRQChr13g0413361 Helianthus annuus HOM05D000555 ORTHO05D000646 9.0e-08 61.6 117 37.6
HanXRQChr10g0284571 Helianthus annuus HOM05D000555 ORTHO05D000646 1.2e-07 61.2 117 37.6
BraA03t15149Z Brassica rapa HOM05D000555 ORTHO05D000646 1.5e-07 60.8 265 34.7
Gohir.A05G058700 Gossypium hirsutum HOM05D000555 ORTHO05D000646 1.5e-07 60.8 197 33.0
HanXRQChr10g0301571 Helianthus annuus HOM05D000555 ORTHO05D000646 1.5e-07 60.8 117 37.6
Psat6g027440 Pisum sativum HOM05D000555 ORTHO05D000646 1.5e-07 60.8 243 30.5
arahy.Tifrunner.gnm1.ann1.QZG3GX Arachis hypogaea HOM05D000555 ORTHO05D000646 2.0e-07 60.5 108 38.0
ECA240G1398 Erigeron canadensis HOM05D000555 ORTHO05D000646 2.0e-07 60.5 108 38.0
TWI12G0853 Tripterygium wilfordii HOM05D000555 ORTHO05D000646 2.0e-07 60.5 118 37.3
arahy.Tifrunner.gnm1.ann1.I3ML28 Arachis hypogaea HOM05D000555 ORTHO05D000646 2.6e-07 60.1 108 38.0
TWI32G0001 Tripterygium wilfordii HOM05D000555 ORTHO05D000646 2.6e-07 60.1 107 38.3
Hma1.2p1_0135F.1_g061900 Hydrangea macrophylla HOM05D000555 ORTHO05D000646 3.4e-07 59.7 108 35.2
SalBow4G0223 Salvia bowleyana HOM05D000555 ORTHO05D000646 3.4e-07 59.7 108 37.0
MSTRG.11595 Avicennia marina HOM05D000555 ORTHO05D000646 4.5e-07 59.3 109 39.4
BraA05t20575Z Brassica rapa HOM05D000555 ORTHO05D000646 4.5e-07 59.3 238 30.7
CDE02G2254 Ceratophyllum demersum HOM05D000555 ORTHO05D000646 4.5e-07 59.3 114 35.1
DCAR_026687 Daucus carota HOM05D000555 ORTHO05D000646 4.5e-07 59.3 110 40.9
Gorai.009G062000 Gossypium raimondii HOM05D000555 ORTHO05D000646 4.5e-07 59.3 195 32.3
CiPaw.02G161700 Carya illinoinensis HOM05D000555 ORTHO05D000646 5.8e-07 58.9 108 36.1
COL.COLO4_26681 Corchorus olitorius HOM05D000555 ORTHO05D000646 5.8e-07 58.9 108 37.0
Manes.14G112328 Manihot esculenta HOM05D000555 ORTHO05D000646 5.8e-07 58.9 124 33.9
Sc09g0010540 Simmondsia chinensis HOM05D000555 ORTHO05D000646 7.6e-07 58.5 107 40.2
TWI18G1175 Tripterygium wilfordii HOM05D000555 ORTHO05D000646 7.6e-07 58.5 118 35.6
Duzib192G0111 Durio zibethinus HOM05D000555 ORTHO05D000646 1.0e-06 58.2 108 36.1
Solyc06g065710.3 Solanum lycopersicum HOM05D000555 ORTHO05D000646 1.0e-06 58.2 191 32.5
Gorai.009G061900 Gossypium raimondii HOM05D000555 ORTHO05D000646 1.3e-06 57.8 222 33.3
PGR044G1288 Punica granatum HOM05D000555 ORTHO05D000646 1.3e-06 57.8 109 35.8
Sabra01G0031900 Salix brachista HOM05D000555 ORTHO05D000646 1.3e-06 57.8 108 37.0
FAN20G0988 Fragaria x ananassa HOM05D000555 ORTHO05D000646 1.7e-06 57.4 108 37.0
TPR.G38929 Trifolium pratense HOM05D000555 ORTHO05D000646 2.9e-06 56.6 232 30.6
CiPaw.07G229100 Carya illinoinensis HOM05D000555 ORTHO05D000646 3.8e-06 56.2 263 28.1
Actinidia23100 Actinidia chinensis HOM05D000555 ORTHO05D000646 4.9e-06 55.8 108 37.0
FvH4_2g41000 Fragaria vesca HOM05D000555 ORTHO05D000646 4.9e-06 55.8 108 36.1
Hma1.2p1_0109F.1_g052490 Hydrangea macrophylla HOM05D000555 ORTHO05D000646 4.9e-06 55.8 108 33.3
MSTRG.26035 Avicennia marina HOM05D000555 ORTHO05D000646 6.4e-06 55.5 108 35.2
BcaC08g47543 Brassica carinata HOM05D000555 ORTHO05D000646 6.4e-06 55.5 100 35.0
FAN15G2747 Fragaria x ananassa HOM05D000555 ORTHO05D000646 6.4e-06 55.5 108 36.1
FAN27G3064 Fragaria x ananassa HOM05D000555 ORTHO05D000646 6.4e-06 55.5 108 36.1
TWI34G0075 Tripterygium wilfordii HOM05D000555 ORTHO05D000646 6.4e-06 55.5 107 37.4
A05p16710 Brassica napus HOM05D000555 ORTHO05D000646 8.4e-06 55.1 225 30.7
Manes.11G065600 Manihot esculenta HOM05D000555 ORTHO05D000646 8.4e-06 55.1 107 32.7
Potri.003G181300 Populus trichocarpa HOM05D000555 ORTHO05D000646 8.4e-06 55.1 119 33.6
THA.LOC104812429 Tarenaya hassleriana HOM05D000555 ORTHO05D000646 8.4e-06 55.1 108 35.2
THA.LOC104822541 Tarenaya hassleriana HOM05D000555 ORTHO05D000646 8.4e-06 55.1 256 29.3


User provided reference genes

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