Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p85930 Brassica napus HOM05D003918 ORTHO05D004494 1.2e-58 229.6 111 100.0
A08p17020 Brassica napus HOM05D003918 ORTHO05D004494 7.6e-45 183.7 91 97.8
BcaC01g00919 Brassica carinata HOM05D003918 ORTHO05D004494 2.9e-44 181.8 91 96.7
BraA08t33664Z Brassica rapa HOM05D003918 ORTHO05D004494 2.9e-44 181.8 91 96.7
BcaB03g11846 Brassica carinata HOM05D003918 ORTHO05D004494 7.1e-43 177.2 91 94.5
Sp4g10790 Schrenkiella parvula HOM05D003918 ORTHO05D004494 6.0e-42 174.1 91 92.3
Thhalv10017487m.g Eutrema salsugineum HOM05D003918 ORTHO05D004494 3.9e-41 171.4 91 91.2
Eucgr.J00392 Eucalyptus grandis HOM05D003918 ORTHO05D004494 1.9e-40 169.1 101 83.2
Thhalv10017678m.g Eutrema salsugineum HOM05D003918 ORTHO05D004494 1.9e-40 169.1 96 83.3
Aa31LG5G8120 Aethionema arabicum HOM05D003918 ORTHO05D004494 2.5e-40 168.7 91 89.0
AL4G22250 Arabidopsis lyrata HOM05D003918 ORTHO05D004494 2.5e-40 168.7 91 89.0
AT2G27960 Arabidopsis thaliana HOM05D003918 ORTHO05D004494 3.3e-40 168.3 91 87.9
Haze_03482 Corylus avellana HOM05D003918 ORTHO05D004494 5.6e-40 167.5 92 90.2
PGR119G0927 Punica granatum HOM05D003918 ORTHO05D004494 1.3e-39 166.4 92 89.1
CARHR120670 Cardamine hirsuta HOM05D003918 ORTHO05D004494 1.6e-39 166.0 91 86.8
Carub.0004s0872 Capsella rubella HOM05D003918 ORTHO05D004494 2.1e-39 165.6 91 87.9
Duzib168G2331 Durio zibethinus HOM05D003918 ORTHO05D004494 2.1e-39 165.6 92 88.0
QL01p014884 Quercus lobata HOM05D003918 ORTHO05D004494 2.1e-39 165.6 91 89.0
Aqoxy1G01058 Aquilegia oxysepala HOM05D003918 ORTHO05D004494 2.8e-39 165.2 91 85.7
CiPaw.13G144800 Carya illinoinensis HOM05D003918 ORTHO05D004494 4.8e-39 164.5 91 86.8
Ciclev10029696m.g Citrus clementina HOM05D003918 ORTHO05D004494 4.8e-39 164.5 92 88.0
Oeu040442.1 Olea europaea HOM05D003918 ORTHO05D004494 4.8e-39 164.5 91 85.7
Hund00834 Selenicereus undatus HOM05D003918 ORTHO05D004494 4.8e-39 164.5 89 86.5
HanXRQChr11g0346091 Helianthus annuus HOM05D003918 ORTHO05D004494 8.1e-39 163.7 91 84.6
Nitab4.5_0000173g0230 Nicotiana tabacum HOM05D003918 ORTHO05D004494 8.1e-39 163.7 92 88.0
Oeu007309.2 Olea europaea HOM05D003918 ORTHO05D004494 8.1e-39 163.7 90 83.3
Sopen11g026220 Solanum pennellii HOM05D003918 ORTHO05D004494 8.1e-39 163.7 88 88.6
PGSC0003DMG402000458 Solanum tuberosum HOM05D003918 ORTHO05D004494 8.1e-39 163.7 88 88.6
THA.LOC104826394 Tarenaya hassleriana HOM05D003918 ORTHO05D004494 8.1e-39 163.7 91 90.1
Manes.04G012300 Manihot esculenta HOM05D003918 ORTHO05D004494 1.1e-38 163.3 92 87.0
Nn2g13876 Nelumbo nucifera HOM05D003918 ORTHO05D004494 1.1e-38 163.3 92 87.0
Sc21g0004490 Simmondsia chinensis HOM05D003918 ORTHO05D004494 1.4e-38 162.9 91 85.7
CAN.G546.56 Capsicum annuum HOM05D003918 ORTHO05D004494 1.8e-38 162.5 88 87.5
CiPaw.14G106800 Carya illinoinensis HOM05D003918 ORTHO05D004494 1.8e-38 162.5 92 87.0
COL.COLO4_19215 Corchorus olitorius HOM05D003918 ORTHO05D004494 1.8e-38 162.5 89 85.4
Gohir.A05G085800 Gossypium hirsutum HOM05D003918 ORTHO05D004494 1.8e-38 162.5 92 87.0
Gohir.D05G087700 Gossypium hirsutum HOM05D003918 ORTHO05D004494 1.8e-38 162.5 92 87.0
Gorai.009G089700 Gossypium raimondii HOM05D003918 ORTHO05D004494 1.8e-38 162.5 92 87.0
Hma1.2p1_0051F.1_g029570 Hydrangea macrophylla HOM05D003918 ORTHO05D004494 1.8e-38 162.5 91 85.7
Prupe.6G113800 Prunus persica HOM05D003918 ORTHO05D004494 1.8e-38 162.5 91 86.8
Sc21g0004230 Simmondsia chinensis HOM05D003918 ORTHO05D004494 1.8e-38 162.5 90 85.6
TWI79G0503 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 1.8e-38 162.5 92 87.0
TWI79G0939 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 1.8e-38 162.5 92 87.0
CSS0025262 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 2.4e-38 162.2 89 87.6
CSS0028017 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 2.4e-38 162.2 89 87.6
Cc01_g10200 Coffea canephora HOM05D003918 ORTHO05D004494 2.4e-38 162.2 92 87.0
Haze_23526 Corylus avellana HOM05D001217 ORTHO05D001097 2.4e-38 162.2 92 88.0
Oeu008363.1 Olea europaea HOM05D003918 ORTHO05D004494 2.4e-38 162.2 91 85.7
Peaxi162Scf00983g00019 Petunia axillaris HOM05D003918 ORTHO05D004494 2.4e-38 162.2 91 85.7
Sed0024739 Sechium edule HOM05D003918 ORTHO05D004494 2.4e-38 162.2 91 85.7
Thecc.09G297000 Theobroma cacao HOM05D003918 ORTHO05D004494 2.4e-38 162.2 92 87.0
TWI31G0950 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 2.4e-38 162.2 92 88.0
Ah.01g016010 Amaranthus hybridus HOM05D003918 ORTHO05D004494 3.1e-38 161.8 91 84.6
HanXRQChr01g0019451 Helianthus annuus HOM05D003918 ORTHO05D004494 3.1e-38 161.8 91 83.5
Sed0005005 Sechium edule HOM05D003918 ORTHO05D004494 3.1e-38 161.8 89 89.9
TAR369G0366 Trochodendron aralioides HOM05D003918 ORTHO05D004494 3.1e-38 161.8 91 86.8
ClCG01G013880 Citrullus lanatus HOM05D003918 ORTHO05D004494 4.0e-38 161.4 92 85.9
Lsat_1_v5_gn_1_64981 Lactuca sativa HOM05D003918 ORTHO05D004494 4.0e-38 161.4 90 83.3
CANSAT64G2716 Cannabis sativa HOM05D003918 ORTHO05D004494 5.3e-38 161.0 80 91.2
CARHR120680 Cardamine hirsuta HOM05D003918 ORTHO05D004494 6.9e-38 160.6 78 93.6
Glyma.11G192100 Glycine max HOM05D003918 ORTHO05D004494 6.9e-38 160.6 85 89.4
Glyma.12G082300 Glycine max HOM05D003918 ORTHO05D004494 6.9e-38 160.6 85 89.4
Lj1A213T32 Lonicera japonica HOM05D003918 ORTHO05D004494 6.9e-38 160.6 88 86.4
Lj3g0024072 Lotus japonicus HOM05D003918 ORTHO05D004494 6.9e-38 160.6 85 89.4
Oeu007724.1 Olea europaea HOM05D003918 ORTHO05D004494 6.9e-38 160.6 85 89.4
Phvul.011G086900 Phaseolus vulgaris HOM05D003918 ORTHO05D004494 6.9e-38 160.6 85 89.4
Potri.009G004000 Populus trichocarpa HOM05D003918 ORTHO05D004494 6.9e-38 160.6 91 85.7
Sabra09G0001700 Salix brachista HOM05D003918 ORTHO05D004494 6.9e-38 160.6 91 84.6
THA.LOC104815736 Tarenaya hassleriana HOM05D003918 ORTHO05D004494 6.9e-38 160.6 84 89.3
TAR633G2652 Trochodendron aralioides HOM05D003918 ORTHO05D004494 6.9e-38 160.6 92 85.9
CSS0003214 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 9.0e-38 160.2 88 85.2
CSS0049251 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 9.0e-38 160.2 88 85.2
Dinv16240 Davidia involucrata HOM05D003918 ORTHO05D004494 9.0e-38 160.2 93 84.9
FvH4_3g30520 Fragaria vesca HOM05D003918 ORTHO05D004494 9.0e-38 160.2 91 86.8
FAN11G2739 Fragaria x ananassa HOM05D003918 ORTHO05D004494 9.0e-38 160.2 91 86.8
FAN21G0274 Fragaria x ananassa HOM05D003918 ORTHO05D004494 9.0e-38 160.2 91 86.8
Gohir.A07G105200 Gossypium hirsutum HOM05D003918 ORTHO05D004494 9.0e-38 160.2 92 85.9
Gohir.D07G109300 Gossypium hirsutum HOM05D003918 ORTHO05D004494 9.0e-38 160.2 92 85.9
Gorai.001G117400 Gossypium raimondii HOM05D003918 ORTHO05D004494 9.0e-38 160.2 92 85.9
Rhsim01G0210200 Rhododendron simsii HOM05D003918 ORTHO05D004494 9.0e-38 160.2 91 84.6
Cpa.g.sc47.8 Carica papaya HOM05D003918 ORTHO05D004494 1.2e-37 159.8 91 84.6
AUR62041324 Chenopodium quinoa HOM05D003918 ORTHO05D004494 1.2e-37 159.8 91 82.4
ClCG02G021690 Citrullus lanatus HOM05D003918 ORTHO05D004494 1.2e-37 159.8 90 87.8
MD03G1128000 Malus domestica HOM05D003918 ORTHO05D004494 1.2e-37 159.8 91 85.7
MD11G1149400 Malus domestica HOM05D003918 ORTHO05D004494 1.2e-37 159.8 91 85.7
Rhsim13G0101600 Rhododendron simsii HOM05D003918 ORTHO05D004494 1.2e-37 159.8 80 90.0
Zm00001eb402980 Zea mays HOM05D003918 ORTHO05D004494 1.2e-37 159.8 91 84.6
Ca_10762_v3 Cicer arietinum L. HOM05D003918 ORTHO05D004494 1.5e-37 159.5 85 88.2
ECA248G3596 Erigeron canadensis HOM05D003918 ORTHO05D004494 1.5e-37 159.5 89 83.1
Lalb_Chr01g0004631 Lupinus albus HOM05D003918 ORTHO05D004494 1.5e-37 159.5 91 83.5
Medtr4g057040 Medicago truncatula HOM05D003918 ORTHO05D004494 1.5e-37 159.5 85 88.2
EL10Ac9g21015 Beta vulgaris HOM05D003918 ORTHO05D004494 2.0e-37 159.1 91 83.5
MBI17_g16530_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 2.0e-37 159.1 82 86.6
Oeu000602.1 Olea europaea HOM05D003918 ORTHO05D004494 2.0e-37 159.1 91 82.4
RcHm_v2.0_Chr5g0056481 Rosa chinensis HOM05D003918 ORTHO05D004494 2.0e-37 159.1 91 85.7
HPP92_026243 Vanilla planifolia HOM05D003918 ORTHO05D004494 2.0e-37 159.1 84 86.9
GSVIVG01031454001 Vitis vinifera HOM05D003918 ORTHO05D004494 2.0e-37 159.1 92 85.9
Carub.0004s0873 Capsella rubella HOM05D003918 ORTHO05D004494 2.6e-37 158.7 91 83.5
Dinv29385 Davidia involucrata HOM05D003918 ORTHO05D004494 2.6e-37 158.7 93 83.9
PSO801G0480 Papaver somniferum HOM05D003918 ORTHO05D004494 2.6e-37 158.7 81 87.7
CAN.G246.3 Capsicum annuum HOM05D003918 ORTHO05D004494 3.4e-37 158.3 88 84.1
TAR623G0966 Trochodendron aralioides HOM05D003918 ORTHO05D004494 3.4e-37 158.3 91 83.5
MELO3C026958.2 Cucumis melo HOM05D003918 ORTHO05D004494 4.5e-37 157.9 89 84.3
unitig_899.g14962 Utricularia gibba HOM05D003918 ORTHO05D004494 4.5e-37 157.9 92 84.8
AL4G22230 Arabidopsis lyrata HOM05D003918 ORTHO05D004494 5.8e-37 157.5 80 90.0
AT2G27970 Arabidopsis thaliana HOM05D003918 ORTHO05D004494 5.8e-37 157.5 80 90.0
CsaV3_1G014150 Cucumis sativus L. HOM05D003918 ORTHO05D004494 5.8e-37 157.5 92 84.8
Manes.11G152900 Manihot esculenta HOM05D003918 ORTHO05D004494 5.8e-37 157.5 80 88.8
Psat0ss2518g0280 Pisum sativum HOM05D003918 ORTHO05D004494 5.8e-37 157.5 85 87.1
PGSC0003DMG400018822 Solanum tuberosum HOM05D003918 ORTHO05D004494 5.8e-37 157.5 88 86.4
vmacro03250 Vaccinium macrocarpon HOM05D003918 ORTHO05D004494 5.8e-37 157.5 80 88.8
FAN25G0673 Fragaria x ananassa HOM05D003918 ORTHO05D004494 9.9e-37 156.8 91 85.7
Actinidia07191 Actinidia chinensis HOM05D001217 ORTHO05D004494 1.3e-36 156.4 80 88.8
DCAR_018757 Daucus carota HOM05D003918 ORTHO05D004494 1.3e-36 156.4 87 83.9
SalBow6G1569 Salvia bowleyana HOM05D003918 ORTHO05D004494 1.3e-36 156.4 85 87.1
ECA233G3711 Erigeron canadensis HOM05D003918 ORTHO05D004494 1.7e-36 156.0 88 84.1
CDE09G0194 Ceratophyllum demersum HOM05D003918 ORTHO05D004494 2.2e-36 155.6 80 86.2
SEGI_17224 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 2.9e-36 155.2 78 91.0
BcaB06g28178 Brassica carinata HOM05D003918 ORTHO05D004494 3.8e-36 154.8 76 89.5
Migut.D02301 Erythranthe guttata HOM05D003918 ORTHO05D004494 3.8e-36 154.8 85 85.9
Nitab4.5_0003880g0020 Nicotiana tabacum HOM05D003918 ORTHO05D004494 3.8e-36 154.8 90 85.6
DCAR_015501 Daucus carota HOM05D003918 ORTHO05D004494 4.9e-36 154.5 77 92.2
Os03g0146300 Oryza sativa ssp. japonica HOM05D003918 ORTHO05D004494 6.4e-36 154.1 75 92.0
SEGI_19027 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 6.4e-36 154.1 85 83.5
ATR0043G026 Amborella trichopoda HOM05D003918 ORTHO05D004494 8.4e-36 153.7 83 85.5
Eucgr.B03920 Eucalyptus grandis HOM05D003918 ORTHO05D004494 8.4e-36 153.7 89 82.0
FAN16G1510 Fragaria x ananassa HOM05D003918 ORTHO05D004494 8.4e-36 153.7 97 81.4
Lsat_1_v5_gn_6_43541 Lactuca sativa HOM05D003918 ORTHO05D004494 8.4e-36 153.7 80 86.2
PSO339G4781 Papaver somniferum HOM05D003918 ORTHO05D004494 8.4e-36 153.7 80 86.2
Potri.004G217500 Populus trichocarpa HOM05D003918 ORTHO05D004494 1.4e-35 152.9 79 89.9
SalBow3G4245 Salvia bowleyana HOM05D003918 ORTHO05D004494 1.9e-35 152.5 77 89.6
Pp3c14_11680 Physcomitrium patens HOM05D003918 ORTHO05D004494 2.4e-35 152.1 78 89.7
Pp3c2_6200 Physcomitrium patens HOM05D003918 ORTHO05D004494 2.4e-35 152.1 78 89.7
Lalb_Chr03g0027731 Lupinus albus HOM05D003918 ORTHO05D004494 3.2e-35 151.8 80 87.5
PSO339G2710 Papaver somniferum HOM05D003918 ORTHO05D004494 3.2e-35 151.8 75 89.3
BcaC02g08219 Brassica carinata HOM05D003918 ORTHO05D004494 5.4e-35 151.0 76 86.8
A04p21230 Brassica napus HOM05D003918 ORTHO05D004494 5.4e-35 151.0 76 86.8
C04p57080 Brassica napus HOM05D003918 ORTHO05D004494 5.4e-35 151.0 76 86.8
BolC4t27242H Brassica oleracea HOM05D003918 ORTHO05D004494 5.4e-35 151.0 76 86.8
Lalb_Chr19g0136871 Lupinus albus HOM05D003918 ORTHO05D004494 1.2e-34 149.8 75 90.7
PGR102G3373 Punica granatum HOM05D003918 ORTHO05D004494 1.2e-34 149.8 75 90.7
SMO116G0276 Selaginella moellendorffii HOM05D003918 ORTHO05D004494 1.6e-34 149.4 85 80.0
Mapoly0001s0011 Marchantia polymorpha HOM05D003918 ORTHO05D004494 6.0e-34 147.5 82 81.7
MELO3C004864.2 Cucumis melo HOM05D003918 ORTHO05D004494 7.9e-34 147.1 95 77.9
Glyma.12G083700 Glycine max HOM05D003918 ORTHO05D004494 7.9e-34 147.1 85 83.5
Hma1.2p1_0772F.1_g215980 Hydrangea macrophylla HOM05D003918 ORTHO05D004494 7.9e-34 147.1 101 74.3
Zm00001eb003750 Zea mays HOM05D003918 ORTHO05D004494 1.8e-33 146.0 91 75.8
Phvul.011G088400 Phaseolus vulgaris HOM05D003918 ORTHO05D004494 1.6e-31 139.4 86 76.7
PRCOL_00005401 Prasinoderma coloniale HOM05D003918 ORTHO05D004494 5.3e-30 134.4 81 74.1
Cre03.g180350 Chlamydomonas reinhardtii HOM05D003918 ORTHO05D004494 1.2e-29 133.3 70 82.9
MCO11G605 Micromonas commoda HOM05D003918 ORTHO05D004494 9.9e-29 130.2 68 83.8
CDE02G4651 Ceratophyllum demersum HOM05D003918 ORTHO05D004494 1.1e-27 126.7 80 77.5
MBI16_g13165_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 3.2e-27 125.2 92 65.2
SEGI_02290 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 3.2e-27 125.2 63 92.1
SMO367G0337 Selaginella moellendorffii HOM05D003918 ORTHO05D004494 9.3e-27 123.6 69 76.8
CsaV3_6G014430 Cucumis sativus L. HOM05D003918 ORTHO05D004494 1.0e-25 120.2 72 80.6
Zm00001eb012500 Zea mays HOM05D003918 ORTHO05D004494 1.8e-25 119.4 60 88.3
CBR_g2791 Chara braunii HOM05D003918 ORTHO05D004494 5.6e-24 114.4 60 85.0
MBI11_g44590_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 1.1e-22 110.2 64 78.1
BcaB02g10127 Brassica carinata HOM05D003918 ORTHO05D004494 4.9e-20 101.3 76 63.2
Actinidia24153 Actinidia chinensis HOM05D003918 ORTHO05D004494 1.1e-19 100.1 55 83.6
TPR.G31695 Trifolium pratense HOM05D003918 ORTHO05D004494 2.5e-19 99.0 48 91.7
Actinidia03687 Actinidia chinensis HOM05D003918 ORTHO05D004494 2.2e-15 85.9 44 84.1
ATR0760G002 Amborella trichopoda HOM05D003918 ORTHO05D004494 3.7e-15 85.1 45 88.9
BcaC05g28675 Brassica carinata HOM05D003918 ORTHO05D004494 4.1e-14 81.6 41 82.9
BolC5t33525H Brassica oleracea HOM05D003918 ORTHO05D004494 4.1e-14 81.6 41 82.9
AagrBONN_evm.TU.Sc2ySwM_117.701 Anthoceros agrestis HOM05D005424 ORTHO05D006726 1.5e-13 79.7 46 76.1
Thecc.08G095400 Theobroma cacao HOM05D003918 ORTHO05D004494 4.5e-13 78.2 66 62.1
Zm00001eb191010 Zea mays HOM05D003918 ORTHO05D004494 4.5e-13 78.2 91 48.4
Nn2g10486 Nelumbo nucifera HOM05D003918 ORTHO05D004494 5.9e-13 77.8 38 89.5
CSS0049200 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 3.8e-12 75.1 39 82.1
Nn6g35195 Nelumbo nucifera HOM05D003918 ORTHO05D004494 3.8e-12 75.1 37 89.2
Migut.N02540 Erythranthe guttata HOM05D003918 ORTHO05D004494 6.5e-12 74.3 47 74.5
SGA_v2.0_scaffold50G18575 Striga asiatica HOM05D003918 ORTHO05D004494 1.4e-11 73.2 53 66.0
Ah.03g143830 Amaranthus hybridus HOM05D003918 ORTHO05D004494 3.6e-10 68.6 45 71.1
CSS0021242 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 6.1e-10 67.8 70 55.7
Gohir.A02G090001 Gossypium hirsutum HOM05D003918 ORTHO05D004494 6.7e-09 64.3 38 76.3
Nn4g23314 Nelumbo nucifera HOM05D003918 ORTHO05D004494 1.1e-08 63.5 29 89.7
Nn1g02037 Nelumbo nucifera HOM05D003918 ORTHO05D004494 1.9e-08 62.8 51 54.9
Ah.09g226860 Amaranthus hybridus HOM05D003918 ORTHO05D004494 1.1e-06 57.0 39 71.8


User provided reference genes

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