Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p83880 Brassica napus HOM05D006735 ORTHO05D009558 3.7e-99 365.2 222 100.0
C09p14870 Brassica napus HOM05D011400 ORTHO05D014089 4.7e-30 135.6 160 51.2
C06p27010 Brassica napus HOM05D006735 ORTHO05D009558 4.4e-20 102.4 67 65.7
C07p10210 Brassica napus HOM05D006735 ORTHO05D009558 7.6e-20 101.7 69 62.3
BolC2t07759H Brassica oleracea HOM05D006735 ORTHO05D009558 7.6e-20 101.7 65 75.4
BolC7t41471H Brassica oleracea HOM05D006735 ORTHO05D009558 7.6e-20 101.7 83 53.0
BraA05t22472Z Brassica rapa HOM05D006735 ORTHO05D009558 8.4e-19 98.2 63 71.4
C06p42400 Brassica napus HOM05D011400 ORTHO05D014089 1.1e-18 97.8 45 100.0
C06p42460 Brassica napus HOM05D011400 ORTHO05D014089 1.1e-18 97.8 45 100.0
BolC3t19829H Brassica oleracea HOM05D006735 ORTHO05D009558 1.4e-18 97.4 69 60.9
C07p37620 Brassica napus HOM05D006735 ORTHO05D010262 1.6e-17 94.0 69 60.9
BcaC04g18966 Brassica carinata HOM05D006735 ORTHO05D009558 3.5e-17 92.8 65 61.5
BcaC02g08079 Brassica carinata HOM05D006735 ORTHO05D009558 6.0e-17 92.0 65 61.5
C08p03780 Brassica napus HOM05D006735 ORTHO05D009558 5.1e-16 89.0 69 55.1
BcaC08g46185 Brassica carinata HOM05D011400 ORTHO05D014089 5.6e-15 85.5 54 75.9
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 2.1e-14 83.6 37 100.0
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 4.8e-14 82.4 37 97.3
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 1.1e-13 81.3 42 88.1
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 2.4e-13 80.1 36 97.2
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 9.9e-12 74.7 89 44.9
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 9.9e-12 74.7 89 44.9
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 1.3e-11 74.3 37 86.5
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 2.2e-11 73.6 37 86.5
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 2.2e-11 73.6 37 86.5
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 1.2e-09 67.8 37 81.1
C05p42930 Brassica napus HOM05D006735 ORTHO05D009558 2.7e-09 66.6 67 49.3
BolC5t33020H Brassica oleracea HOM05D006735 ORTHO05D009558 2.7e-09 66.6 67 49.3
BraA10t43706Z Brassica rapa HOM05D006735 ORTHO05D009558 1.3e-08 64.3 58 53.4
A05p40380 Brassica napus HOM05D006735 ORTHO05D009558 1.8e-08 63.9 58 51.7
C09p61560 Brassica napus HOM05D003939 ORTHO05D013368 1.8e-08 63.9 35 77.1
BolC5t31791H Brassica oleracea HOM05D006735 ORTHO05D009558 1.8e-08 63.9 58 51.7
BraA09t36761Z Brassica rapa HOM05D006735 ORTHO05D009558 1.8e-08 63.9 58 51.7
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 2.3e-08 63.5 67 47.8
BraA02t07687Z Brassica rapa HOM05D006735 ORTHO05D009558 2.3e-08 63.5 58 51.7
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 3.0e-08 63.2 37 75.7
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 8.7e-08 61.6 67 47.8
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 1.5e-07 60.8 37 73.0
BcaC01g02992 Brassica carinata HOM05D006735 ORTHO05D009558 2.5e-07 60.1 37 67.6
A07p01920 Brassica napus HOM05D006735 ORTHO05D009558 1.3e-06 57.8 59 47.5
BolC8t50679H Brassica oleracea HOM05D006735 ORTHO05D009558 1.6e-06 57.4 45 55.6


User provided reference genes

Program Settings