Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p75170 Brassica napus HOM05D001239 ORTHO05D000925 1.1e-44 183.0 97 100.0
BcaC07g39054 Brassica carinata HOM05D001239 ORTHO05D000925 2.2e-11 72.4 79 53.2
BraA04t17503Z Brassica rapa HOM05D001239 ORTHO05D000925 2.2e-11 72.4 80 46.2
BcaC06g33316 Brassica carinata HOM05D062218 ORTHO05D031783 3.7e-11 71.6 70 55.7
A02p15660 Brassica napus HOM05D008478 ORTHO05D000925 4.8e-11 71.2 86 44.2
BraA09t38272Z Brassica rapa HOM05D010756 ORTHO05D000925 4.8e-11 71.2 79 46.8
BcaC01g01483 Brassica carinata HOM05D001239 ORTHO05D000925 8.2e-11 70.5 93 46.2
BraA08t33512Z Brassica rapa HOM05D001239 ORTHO05D000925 8.2e-11 70.5 83 43.4
BraA01t01839Z Brassica rapa HOM05D001239 ORTHO05D000925 1.4e-10 69.7 79 50.6
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 2.4e-10 68.9 82 42.7
C06p32260 Brassica napus HOM05D001239 ORTHO05D000925 3.1e-10 68.6 93 49.5
BolC3t14366H Brassica oleracea HOM05D010756 ORTHO05D000925 4.1e-10 68.2 79 46.8
BolC6t35759H Brassica oleracea HOM05D010756 ORTHO05D000925 4.1e-10 68.2 80 48.8
BolC6t37992H Brassica oleracea HOM05D010756 ORTHO05D000925 5.3e-10 67.8 94 43.6
BolC5t31042H Brassica oleracea HOM05D001239 ORTHO05D000925 6.9e-10 67.4 93 48.4
BolC6t38349H Brassica oleracea HOM05D000152 ORTHO05D000609 6.9e-10 67.4 93 48.4
BraA01t00649Z Brassica rapa HOM05D001239 ORTHO05D000925 6.9e-10 67.4 78 46.2
BraA02t06627Z Brassica rapa HOM05D008478 ORTHO05D000925 6.9e-10 67.4 86 41.9
AL3G48000 Arabidopsis lyrata HOM05D012944 ORTHO05D014028 1.2e-09 66.6 80 47.5
BcaC02g12210 Brassica carinata HOM05D000003 ORTHO05D000925 1.2e-09 66.6 79 44.3
BraA07t28081Z Brassica rapa HOM05D001239 ORTHO05D000925 1.2e-09 66.6 81 42.0
BolC1t03157H Brassica oleracea HOM05D010756 ORTHO05D000925 1.5e-09 66.2 78 46.2
BolC2t08127H Brassica oleracea HOM05D010756 ORTHO05D000925 1.5e-09 66.2 88 45.5
BraA01t00376Z Brassica rapa HOM05D001239 ORTHO05D000925 1.5e-09 66.2 83 47.0
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-09 65.5 80 45.0
BcaC09g51106 Brassica carinata HOM05D013699 ORTHO05D023882 3.4e-09 65.1 80 43.8
BolC9t59239H Brassica oleracea HOM05D016984 ORTHO05D018748 4.5e-09 64.7 86 41.9
BcaC05g30415 Brassica carinata HOM05D010756 ORTHO05D023874 5.9e-09 64.3 79 44.3
BolC9t58964H Brassica oleracea HOM05D008478 ORTHO05D000925 5.9e-09 64.3 92 41.3
BraA02t08675Z Brassica rapa HOM05D001239 ORTHO05D000925 7.6e-09 63.9 94 42.6
AL1G55340 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 1.0e-08 63.5 80 45.0
BolC8t47090H Brassica oleracea HOM05D009883 ORTHO05D013233 1.0e-08 63.5 74 48.6
AL2G28950 Arabidopsis lyrata HOM05D012944 ORTHO05D014028 1.3e-08 63.2 79 45.6
C08p32300 Brassica napus HOM05D010756 ORTHO05D000925 1.3e-08 63.2 79 43.0
BolC8t50844H Brassica oleracea HOM05D010756 ORTHO05D000925 1.3e-08 63.2 79 43.0
BcaB03g15427 Brassica carinata HOM05D001239 ORTHO05D000925 2.2e-08 62.4 86 41.9
BcaC02g09573 Brassica carinata HOM05D001239 ORTHO05D000925 2.2e-08 62.4 92 40.2
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 2.2e-08 62.4 92 40.2
BcaC08g44551 Brassica carinata HOM05D010756 ORTHO05D023874 2.2e-08 62.4 79 43.0
C07p36130 Brassica napus HOM05D001239 ORTHO05D000925 2.2e-08 62.4 86 43.0
BolC4t26004H Brassica oleracea HOM05D008478 ORTHO05D000925 2.2e-08 62.4 92 40.2
BolC7t45952H Brassica oleracea HOM05D008478 ORTHO05D000925 2.2e-08 62.4 92 40.2
BraA01t04462Z Brassica rapa HOM05D001239 ORTHO05D000925 2.2e-08 62.4 78 47.4
BraA10t43824Z Brassica rapa HOM05D001239 ORTHO05D000925 2.2e-08 62.4 79 41.8
AT3G43837 Arabidopsis thaliana HOM05D066420 ORTHO05D038738 2.9e-08 62.0 71 47.9
BolC5t29933H Brassica oleracea HOM05D001239 ORTHO05D000925 2.9e-08 62.0 79 44.3
BolC9t58145H Brassica oleracea HOM05D001239 ORTHO05D000925 2.9e-08 62.0 86 40.7
BcaC01g00118 Brassica carinata HOM05D001239 ORTHO05D000925 3.8e-08 61.6 81 43.2
A06p41350 Brassica napus HOM05D008478 ORTHO05D000925 3.8e-08 61.6 76 44.7
C07p26790 Brassica napus HOM05D001239 ORTHO05D000925 3.8e-08 61.6 83 41.0
BolC2t11079H Brassica oleracea HOM05D001239 ORTHO05D000925 3.8e-08 61.6 80 43.8
BolC9t56299H Brassica oleracea HOM05D001239 ORTHO05D000925 3.8e-08 61.6 79 45.6
BraA07t27837Z Brassica rapa HOM05D000003 ORTHO05D000004 3.8e-08 61.6 76 44.7
BcaB07g33890 Brassica carinata HOM05D001239 ORTHO05D000925 5.0e-08 61.2 78 46.2
BolC8t49469H Brassica oleracea HOM05D001239 ORTHO05D000925 5.0e-08 61.2 75 44.0
C06p07680 Brassica napus HOM05D001239 ORTHO05D000925 6.5e-08 60.8 81 45.7
BolC3t14593H Brassica oleracea HOM05D001239 ORTHO05D031783 6.5e-08 60.8 66 51.5
AL7G15770 Arabidopsis lyrata HOM05D011429 ORTHO05D000925 8.5e-08 60.5 86 40.7
AL8G23160 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 8.5e-08 60.5 88 39.8
BolC7t43208H Brassica oleracea HOM05D001239 ORTHO05D000925 8.5e-08 60.5 83 41.0
BraA06t24059Z Brassica rapa HOM05D001239 ORTHO05D000925 8.5e-08 60.5 77 46.8
C07p34530 Brassica napus HOM05D009883 ORTHO05D042457 1.1e-07 60.1 77 42.9
BolC7t43984H Brassica oleracea HOM05D009883 ORTHO05D042457 1.1e-07 60.1 77 42.9
BolC8t52815H Brassica oleracea HOM05D001239 ORTHO05D000925 1.1e-07 60.1 76 43.4
AL3G32130 Arabidopsis lyrata HOM05D011429 ORTHO05D000925 1.4e-07 59.7 83 42.2
BcaB07g32252 Brassica carinata HOM05D009883 ORTHO05D000925 1.4e-07 59.7 79 43.0
BcaB08g35549 Brassica carinata HOM05D001239 ORTHO05D000925 1.4e-07 59.7 86 43.0
BcaC03g15116 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-07 59.7 84 40.5
BcaC08g43399 Brassica carinata HOM05D001239 ORTHO05D000925 2.5e-07 58.9 81 44.4
C02p54670 Brassica napus HOM05D001239 ORTHO05D000925 2.5e-07 58.9 85 42.4
BcaB06g28514 Brassica carinata HOM05D001239 ORTHO05D000925 3.2e-07 58.5 86 38.4
A04p26810 Brassica napus HOM05D008478 ORTHO05D000925 3.2e-07 58.5 76 43.4
BolC2t07572H Brassica oleracea HOM05D016984 ORTHO05D018748 3.2e-07 58.5 64 50.0
BcaC03g13198 Brassica carinata HOM05D013699 ORTHO05D017637 5.5e-07 57.8 82 39.0
BcaC03g15329 Brassica carinata HOM05D001239 ORTHO05D000925 5.5e-07 57.8 86 38.4
C07p20360 Brassica napus HOM05D001239 ORTHO05D000925 5.5e-07 57.8 80 43.8
BolC3t19983H Brassica oleracea HOM05D001239 ORTHO05D000925 5.5e-07 57.8 83 47.0
BolC7t45106H Brassica oleracea HOM05D062218 ORTHO05D000925 5.5e-07 57.8 62 53.2
Thhalv10023819m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 5.5e-07 57.8 90 42.2
BcaB06g27275 Brassica carinata HOM05D001239 ORTHO05D000925 7.2e-07 57.4 77 41.6
BolC4t26714H Brassica oleracea HOM05D001239 ORTHO05D000925 7.2e-07 57.4 84 41.7
BcaB04g18173 Brassica carinata HOM05D001239 ORTHO05D000925 9.3e-07 57.0 78 42.3
BcaB08g34848 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-06 56.6 79 41.8
BcaC01g02035 Brassica carinata HOM05D001239 ORTHO05D000925 1.2e-06 56.6 87 40.2
BcaC05g25993 Brassica carinata HOM05D000003 ORTHO05D000006 1.2e-06 56.6 80 43.8
C05p19460 Brassica napus HOM05D001239 ORTHO05D000925 1.2e-06 56.6 80 43.8
BraA02t06066Z Brassica rapa HOM05D001239 ORTHO05D000925 1.2e-06 56.6 76 44.7
BraA06t24278Z Brassica rapa HOM05D013699 ORTHO05D023882 1.2e-06 56.6 80 37.5
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 1.6e-06 56.2 72 41.7
BcaC08g46847 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-06 56.2 80 42.5
C06p08080 Brassica napus HOM05D001239 ORTHO05D000925 1.6e-06 56.2 81 40.7
BolC1t04990H Brassica oleracea HOM05D001239 ORTHO05D000925 1.6e-06 56.2 69 44.9
BolC4t25971H Brassica oleracea HOM05D001239 ORTHO05D000925 1.6e-06 56.2 79 43.0
BolC6t38967H Brassica oleracea HOM05D001239 ORTHO05D000925 1.6e-06 56.2 69 46.4
BolC6t39320H Brassica oleracea HOM05D001239 ORTHO05D000925 1.6e-06 56.2 77 48.1
BraA08t35548Z Brassica rapa HOM05D001239 ORTHO05D000925 1.6e-06 56.2 63 46.0
Thhalv10011157m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 1.6e-06 56.2 74 47.3
BcaC01g06146 Brassica carinata HOM05D001239 ORTHO05D000925 2.1e-06 55.8 79 43.0
BolC6t36113H Brassica oleracea HOM05D001239 ORTHO05D000925 2.1e-06 55.8 78 42.3
BolC7t42556H Brassica oleracea HOM05D001239 ORTHO05D000925 2.1e-06 55.8 80 42.5
BolC7t44282H Brassica oleracea HOM05D001239 ORTHO05D000925 2.1e-06 55.8 85 40.0
BraA08t32647Z Brassica rapa HOM05D001239 ORTHO05D000925 2.1e-06 55.8 71 46.5
BcaC03g17316 Brassica carinata HOM05D001239 ORTHO05D000925 2.7e-06 55.5 73 45.2
BcaC06g33058 Brassica carinata HOM05D001239 ORTHO05D000925 2.7e-06 55.5 79 41.8
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-06 55.5 76 42.1
BcaNung02294 Brassica carinata HOM05D001239 ORTHO05D000925 2.7e-06 55.5 82 42.7
BolC6t39317H Brassica oleracea HOM05D001239 ORTHO05D000925 2.7e-06 55.5 63 44.4
BraA03t13628Z Brassica rapa HOM05D001239 ORTHO05D000925 2.7e-06 55.5 86 44.2
BraA03t15429Z Brassica rapa HOM05D001239 ORTHO05D000925 2.7e-06 55.5 77 45.5
BraA07t29530Z Brassica rapa HOM05D001239 ORTHO05D000925 2.7e-06 55.5 76 42.1
BolC2t09268H Brassica oleracea HOM05D001239 ORTHO05D000925 3.6e-06 55.1 90 40.0
BraA05t20543Z Brassica rapa HOM05D016984 ORTHO05D018748 3.6e-06 55.1 53 54.7
A08p33830 Brassica napus HOM05D001239 ORTHO05D000925 4.6e-06 54.7 73 46.6
C06p10370 Brassica napus HOM05D001239 ORTHO05D000925 4.6e-06 54.7 80 42.5
C07p55460 Brassica napus HOM05D009883 ORTHO05D014964 4.6e-06 54.7 75 42.7
BolC2t06823H Brassica oleracea HOM05D010756 ORTHO05D000925 4.6e-06 54.7 70 40.0
BolC4t27575H Brassica oleracea HOM05D009883 ORTHO05D014964 4.6e-06 54.7 75 42.7
BolC6t35566H Brassica oleracea HOM05D001239 ORTHO05D000925 4.6e-06 54.7 84 41.7
BcaC03g13424 Brassica carinata HOM05D001239 ORTHO05D000925 6.1e-06 54.3 89 39.3
C02p49620 Brassica napus HOM05D001239 ORTHO05D000925 6.1e-06 54.3 97 38.1
BolC2t06689H Brassica oleracea HOM05D001239 ORTHO05D000925 6.1e-06 54.3 89 39.3
BraA08t34149Z Brassica rapa HOM05D001239 ORTHO05D000925 6.1e-06 54.3 72 45.8
Thhalv10023022m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 6.1e-06 54.3 74 47.3
BcaB01g05133 Brassica carinata HOM05D000003 ORTHO05D000925 7.9e-06 53.9 79 39.2
BcaC03g15550 Brassica carinata HOM05D001239 ORTHO05D000925 7.9e-06 53.9 90 38.9
C01p16740 Brassica napus HOM05D009883 ORTHO05D014964 7.9e-06 53.9 75 42.7
BolC4t23673H Brassica oleracea HOM05D001239 ORTHO05D000925 7.9e-06 53.9 82 39.0
BraA02t08257Z Brassica rapa HOM05D013375 ORTHO05D020010 7.9e-06 53.9 77 42.9


User provided reference genes

Program Settings