Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p69730 Brassica napus HOM05D009142 ORTHO05D017515 3.2e-65 251.5 121 100.0
BcaC01g01996 Brassica carinata HOM05D009142 ORTHO05D017515 7.9e-64 246.9 121 98.3
BolC3t19232H Brassica oleracea HOM05D009142 ORTHO05D106603 5.7e-62 240.7 126 94.4
BcaC01g02001 Brassica carinata HOM05D009142 ORTHO05D017515 9.1e-60 233.4 121 93.4
C03p69660 Brassica napus HOM05D009142 ORTHO05D017515 9.1e-60 233.4 121 93.4
BolC3t19224H Brassica oleracea HOM05D009142 ORTHO05D017515 9.1e-60 233.4 121 93.4
BolC2t08459H Brassica oleracea HOM05D009142 ORTHO05D106632 1.5e-57 226.1 121 90.9
C02p23170 Brassica napus HOM05D009142 ORTHO05D017515 3.2e-57 224.9 121 91.7
C01p32780 Brassica napus HOM05D009142 ORTHO05D017515 5.5e-57 224.2 121 91.7
BolC9t55760H Brassica oleracea HOM05D009142 ORTHO05D017515 1.2e-56 223.0 126 88.1
BcaC04g21679 Brassica carinata HOM05D009142 ORTHO05D090460 4.7e-56 221.1 124 87.9
C09p28950 Brassica napus HOM05D009142 ORTHO05D097323 1.7e-53 212.6 121 87.6
BcaC07g37235 Brassica carinata HOM05D009142 ORTHO05D090351 1.2e-48 196.4 106 90.6
C08p06560 Brassica napus HOM05D009142 ORTHO05D017515 1.6e-48 196.1 106 91.5
BcaC09g49802 Brassica carinata HOM05D009142 ORTHO05D091049 3.7e-45 184.9 121 79.3
C04p24200 Brassica napus HOM05D009142 ORTHO05D097994 2.5e-41 172.2 86 95.3
C01p28360 Brassica napus HOM05D009142 ORTHO05D040187 2.0e-38 162.5 146 65.1
BolC1t02765H Brassica oleracea HOM05D009142 ORTHO05D040187 3.7e-37 158.3 117 73.5
BcaC09g50894 Brassica carinata HOM05D009142 ORTHO05D095404 2.1e-24 115.9 91 72.5
BolC1t01877H Brassica oleracea HOM05D009142 ORTHO05D105623 4.1e-20 101.7 121 50.4
C03p63110 Brassica napus HOM05D009142 ORTHO05D101793 1.1e-17 93.6 80 70.0
BcaC06g33515 Brassica carinata HOM05D009142 ORTHO05D027516 2.9e-13 79.0 76 63.2
C07p48260 Brassica napus HOM05D009142 ORTHO05D027516 2.9e-13 79.0 76 63.2
BcaC06g32973 Brassica carinata HOM05D003261 ORTHO05D004230 2.1e-11 72.8 48 79.2
BcaC06g33437 Brassica carinata HOM05D003261 ORTHO05D004230 2.1e-11 72.8 62 67.7
C07p47500 Brassica napus HOM05D003261 ORTHO05D004230 2.1e-11 72.8 62 67.7
BolC7t45277H Brassica oleracea HOM05D003261 ORTHO05D004230 2.1e-11 72.8 62 67.7
BcaC01g02590 Brassica carinata HOM05D012155 ORTHO05D021780 7.8e-11 70.9 41 85.4
BraA03t14046Z Brassica rapa HOM05D003261 ORTHO05D004230 7.8e-11 70.9 62 66.1
A03p49450 Brassica napus HOM05D003261 ORTHO05D004230 1.7e-10 69.7 62 66.1
C01p19490 Brassica napus HOM05D009142 ORTHO05D041610 5.1e-10 68.2 35 91.4
Carub.0007s2576 Capsella rubella HOM05D003261 ORTHO05D004230 6.6e-10 67.8 48 72.9
Thhalv10025068m.g Eutrema salsugineum HOM05D003261 ORTHO05D004230 6.6e-10 67.8 48 72.9
Sp7g14310 Schrenkiella parvula HOM05D002510 ORTHO05D007210 1.1e-09 67.0 48 75.0
SpUn1161_0010 Schrenkiella parvula HOM05D003261 ORTHO05D027516 1.1e-09 67.0 48 75.0
AL7G39370 Arabidopsis lyrata HOM05D003261 ORTHO05D004230 2.5e-09 65.9 48 72.9
CARHR290440 Cardamine hirsuta HOM05D003261 ORTHO05D004230 3.3e-09 65.5 48 72.9
BcaC07g37407 Brassica carinata HOM05D009142 ORTHO05D032415 2.1e-08 62.8 37 86.5
C08p08840 Brassica napus HOM05D009142 ORTHO05D032415 2.1e-08 62.8 37 86.5
BolC8t47730H Brassica oleracea HOM05D009142 ORTHO05D032415 2.1e-08 62.8 37 86.5
AT4G15900 Arabidopsis thaliana HOM05D003261 ORTHO05D004230 2.3e-07 59.3 49 73.5
Aa31LG10G6240 Aethionema arabicum HOM05D003261 ORTHO05D004230 3.1e-07 58.9 48 66.7
BcaNung00239 Brassica carinata HOM05D003261 ORTHO05D004230 4.4e-06 55.1 48 64.6


User provided reference genes

Program Settings