Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p68510 Brassica napus HOM05D001285 ORTHO05D039944 1.0e-60 236.5 117 100.0
BcaC01g02097 Brassica carinata HOM05D001285 ORTHO05D039944 6.7e-60 233.8 117 99.1
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 3.5e-32 141.7 115 69.6
C05p38640 Brassica napus HOM05D001285 ORTHO05D000199 3.5e-32 141.7 115 69.6
BcaNung03065 Brassica carinata HOM05D001285 ORTHO05D000199 1.0e-31 140.2 115 68.7
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 1.1e-30 136.7 115 67.8
C03p03120 Brassica napus HOM05D001285 ORTHO05D000199 2.8e-29 132.1 116 65.5
C06p15920 Brassica napus HOM05D001285 ORTHO05D000199 3.0e-28 128.6 113 65.5
BolC4t23605H Brassica oleracea HOM05D001285 ORTHO05D000199 4.9e-26 121.3 115 56.5
BcaC08g44187 Brassica carinata HOM05D001285 ORTHO05D000199 7.3e-22 107.5 98 63.3
BcaC02g11078 Brassica carinata HOM05D001285 ORTHO05D000199 1.3e-18 96.7 99 51.5
BolC5t32603H Brassica oleracea HOM05D001285 ORTHO05D021957 1.3e-18 96.7 80 68.8
Thhalv10002866m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.2e-18 95.9 112 47.3
BcaB03g15573 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-17 93.2 112 47.3
C02p49790 Brassica napus HOM05D001285 ORTHO05D000199 2.4e-17 92.4 116 50.9
BcaC06g30937 Brassica carinata HOM05D001285 ORTHO05D000199 3.2e-17 92.0 112 46.4
A02p36790 Brassica napus HOM05D001285 ORTHO05D000199 3.2e-17 92.0 114 50.9
BraA02t08671Z Brassica rapa HOM05D001285 ORTHO05D000199 3.2e-17 92.0 114 50.9
BcaC07g38661 Brassica carinata HOM05D001285 ORTHO05D000199 5.4e-17 91.3 116 50.0
BcaB01g00219 Brassica carinata HOM05D001285 ORTHO05D000199 1.3e-15 86.7 117 48.7
BcaB03g15494 Brassica carinata HOM05D001285 ORTHO05D000199 2.3e-15 85.9 117 48.7
BolC2t07252H Brassica oleracea HOM05D001285 ORTHO05D000199 5.1e-15 84.7 115 46.1
BcaB06g28698 Brassica carinata HOM05D001285 ORTHO05D000199 8.6e-15 84.0 117 47.9
BraA01t02157Z Brassica rapa HOM05D001285 ORTHO05D000199 1.1e-14 83.6 115 45.2
A06p22000 Brassica napus HOM05D001285 ORTHO05D000199 1.5e-14 83.2 116 47.4
BraA07t28518Z Brassica rapa HOM05D001285 ORTHO05D000199 1.5e-14 83.2 118 44.1
BraA06t25595Z Brassica rapa HOM05D001285 ORTHO05D000199 1.9e-14 82.8 112 43.8
BcaC04g20925 Brassica carinata HOM05D001285 ORTHO05D000199 2.5e-14 82.4 115 45.2
BcaC05g27108 Brassica carinata HOM05D001285 ORTHO05D000199 2.5e-14 82.4 112 43.8
BraA03t11415Z Brassica rapa HOM05D001285 ORTHO05D000199 2.5e-14 82.4 115 45.2
A02p26990 Brassica napus HOM05D001285 ORTHO05D000199 4.3e-14 81.6 112 44.6
C02p29930 Brassica napus HOM05D001285 ORTHO05D000199 4.3e-14 81.6 128 45.3
BolC6t35851H Brassica oleracea HOM05D001285 ORTHO05D000199 4.3e-14 81.6 116 44.8
BcaC07g41747 Brassica carinata HOM05D001285 ORTHO05D000199 5.6e-14 81.3 115 45.2
Carub.0004s0683 Capsella rubella HOM05D001285 ORTHO05D000199 9.5e-14 80.5 115 40.9
BcaC08g43423 Brassica carinata HOM05D001285 ORTHO05D000199 1.2e-13 80.1 116 44.8
Carub.0006s2832 Capsella rubella HOM05D001285 ORTHO05D000199 1.6e-13 79.7 115 41.7
AL1G51180 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 3.6e-13 78.6 115 40.9
AL3G45900 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 6.2e-13 77.8 116 44.0
BraA05t21432Z Brassica rapa HOM05D001285 ORTHO05D000199 6.2e-13 77.8 116 46.6
BcaC03g14913 Brassica carinata HOM05D001285 ORTHO05D000199 8.1e-13 77.4 117 45.3
A10p10700 Brassica napus HOM05D001285 ORTHO05D000199 8.1e-13 77.4 117 45.3
A10p12140 Brassica napus HOM05D001285 ORTHO05D000199 8.1e-13 77.4 116 43.1
C05p19190 Brassica napus HOM05D001285 ORTHO05D000199 8.1e-13 77.4 110 43.6
BolC5t30619H Brassica oleracea HOM05D001285 ORTHO05D000199 8.1e-13 77.4 110 43.6
C01p48530 Brassica napus HOM05D001285 ORTHO05D000199 1.1e-12 77.0 112 43.8
Thhalv10015545m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.8e-12 76.3 116 37.9
AL1G60090 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.3e-12 75.9 115 39.1
BcaC03g17776 Brassica carinata HOM05D001285 ORTHO05D000199 2.3e-12 75.9 117 44.4
BolC2t11860H Brassica oleracea HOM05D001285 ORTHO05D000199 3.1e-12 75.5 117 44.4
AL6G40760 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 4.0e-12 75.1 116 43.1
BolC9t59420H Brassica oleracea HOM05D001285 ORTHO05D000199 8.9e-12 73.9 101 47.5
CARHR185190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 8.9e-12 73.9 112 42.0
C06p24190 Brassica napus HOM05D001285 ORTHO05D000199 1.2e-11 73.6 117 43.6
C09p65970 Brassica napus HOM05D001285 ORTHO05D000199 1.2e-11 73.6 101 47.5
Thhalv10009813m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.2e-11 73.6 116 37.1
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 1.5e-11 73.2 114 37.7
Carub.0004s0691 Capsella rubella HOM05D001285 ORTHO05D000199 1.5e-11 73.2 112 38.4
Carub.0005s0342 Capsella rubella HOM05D001285 ORTHO05D000199 2.6e-11 72.4 116 37.9
AL6G42160 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 4.9e-10 68.2 116 38.8
BcaB03g16504 Brassica carinata HOM05D001285 ORTHO05D000199 4.9e-10 68.2 107 41.1
AL1G65960 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.1e-09 67.0 114 38.6
BcaB08g35036 Brassica carinata HOM05D001285 ORTHO05D000199 1.1e-09 67.0 71 54.9
AL8G24550 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.4e-09 66.6 115 35.7
AT5G45570 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 1.9e-09 66.2 115 33.9
BolC1t02405H Brassica oleracea HOM05D001285 ORTHO05D000199 1.9e-09 66.2 86 47.7
BraA09t37769Z Brassica rapa HOM05D001285 ORTHO05D000199 1.9e-09 66.2 117 41.0
AT4G08430 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 3.2e-09 65.5 113 36.3
BcaB02g07816 Brassica carinata HOM05D001285 ORTHO05D000199 3.2e-09 65.5 79 46.8
Sp3g26120 Schrenkiella parvula HOM05D001285 ORTHO05D015508 3.2e-09 65.5 71 56.3
C02p23920 Brassica napus HOM05D001285 ORTHO05D000199 4.1e-09 65.1 86 47.7
CARHR104030 Cardamine hirsuta HOM05D001285 ORTHO05D000199 4.1e-09 65.1 78 46.2
AL3G30210 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 7.1e-09 64.3 80 42.5
AL3G40680 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.7e-08 62.4 79 44.3
C02p57920 Brassica napus HOM05D001285 ORTHO05D000199 3.5e-08 62.0 86 46.5
C07p23590 Brassica napus HOM05D001285 ORTHO05D000199 4.6e-08 61.6 79 45.6
BcaC08g44579 Brassica carinata HOM05D001285 ORTHO05D000199 6.0e-08 61.2 54 57.4
C09p20890 Brassica napus HOM05D001285 ORTHO05D000199 6.0e-08 61.2 79 45.6
BraA05t19209Z Brassica rapa HOM05D001285 ORTHO05D021957 7.8e-08 60.8 35 77.1
Carub.0008s0707 Capsella rubella HOM05D001285 ORTHO05D000199 1.3e-07 60.1 81 39.5
Carub.0003s3058 Capsella rubella HOM05D001285 ORTHO05D000199 1.7e-07 59.7 112 33.9
Thhalv10005571m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.3e-07 59.3 95 36.8
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.0e-07 58.9 108 37.0
BcaC05g30530 Brassica carinata HOM05D001285 ORTHO05D000199 3.9e-07 58.5 45 62.2
CARHR116190 Cardamine hirsuta HOM05D001285 ORTHO05D000199 3.9e-07 58.5 113 38.1
Thhalv10002320m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.9e-07 58.5 96 37.5
C09p55130 Brassica napus HOM05D001285 ORTHO05D000199 5.1e-07 58.2 77 42.9
BcaB05g23429 Brassica carinata HOM05D001285 ORTHO05D000199 6.6e-07 57.8 114 34.2
BcaC02g12762 Brassica carinata HOM05D001285 ORTHO05D021957 6.6e-07 57.8 35 71.4
BcaC05g25966 Brassica carinata HOM05D001285 ORTHO05D000199 6.6e-07 57.8 48 56.2
C04p02540 Brassica napus HOM05D001285 ORTHO05D021957 6.6e-07 57.8 35 71.4
BolC4t21897H Brassica oleracea HOM05D001285 ORTHO05D021957 6.6e-07 57.8 35 71.4
AL5G16910 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.1e-06 57.0 79 40.5
BcaB07g33410 Brassica carinata HOM05D001285 ORTHO05D000199 1.5e-06 56.6 108 34.3
BraA05t20715Z Brassica rapa HOM05D001285 ORTHO05D000199 1.5e-06 56.6 80 42.5
Thhalv10021955m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.9e-06 56.2 116 30.2
A01p27760 Brassica napus HOM05D001285 ORTHO05D000199 2.5e-06 55.8 77 40.3
C06p26050 Brassica napus HOM05D001285 ORTHO05D000199 2.5e-06 55.8 77 41.6
C08p11380 Brassica napus HOM05D001285 ORTHO05D000199 2.5e-06 55.8 77 41.6
Thhalv10011096m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.5e-06 55.8 116 30.2
C05p22020 Brassica napus HOM05D001285 ORTHO05D000199 3.3e-06 55.5 77 41.6
AL4G20190 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 5.6e-06 54.7 99 36.4
AT1G37020 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 5.6e-06 54.7 113 32.7
BcaC08g43217 Brassica carinata HOM05D001285 ORTHO05D000199 5.6e-06 54.7 61 47.5
A05p21700 Brassica napus HOM05D001285 ORTHO05D000199 7.3e-06 54.3 77 40.3
C03p64080 Brassica napus HOM05D001285 ORTHO05D000199 7.3e-06 54.3 77 41.6
BcaC03g15031 Brassica carinata HOM05D001285 ORTHO05D000199 9.5e-06 53.9 60 48.3


User provided reference genes

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