Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p68110 Brassica napus HOM05D001285 ORTHO05D000199 1.1e-37 159.5 78 100.0
BolC3t19033H Brassica oleracea HOM05D001285 ORTHO05D000199 1.1e-37 159.5 78 100.0
BcaB01g00219 Brassica carinata HOM05D001285 ORTHO05D000199 1.8e-24 115.5 62 91.9
BcaB03g15495 Brassica carinata HOM05D001285 ORTHO05D000199 1.8e-24 115.5 62 91.9
C02p23920 Brassica napus HOM05D001285 ORTHO05D000199 4.0e-24 114.4 62 91.9
C02p41800 Brassica napus HOM05D001285 ORTHO05D000199 4.0e-24 114.4 62 91.9
C02p57920 Brassica napus HOM05D001285 ORTHO05D000199 4.0e-24 114.4 62 91.9
C03p70020 Brassica napus HOM05D001285 ORTHO05D000199 4.0e-24 114.4 62 91.9
BcaC03g14913 Brassica carinata HOM05D001285 ORTHO05D000199 8.8e-24 113.2 62 90.3
BolC2t11860H Brassica oleracea HOM05D001285 ORTHO05D000199 1.2e-23 112.8 62 90.3
A08p03050 Brassica napus HOM05D001285 ORTHO05D000199 5.7e-23 110.5 62 85.5
C04p60190 Brassica napus HOM05D001285 ORTHO05D000199 5.7e-23 110.5 62 85.5
A06p22000 Brassica napus HOM05D001285 ORTHO05D000199 1.3e-22 109.4 62 85.5
BraA05t21432Z Brassica rapa HOM05D001285 ORTHO05D000199 3.7e-22 107.8 62 83.9
BolC2t10459H Brassica oleracea HOM05D001285 ORTHO05D000199 4.9e-22 107.5 62 83.9
BcaB03g16262 Brassica carinata HOM05D001285 ORTHO05D000199 1.6e-20 102.4 60 81.7
BcaB06g28698 Brassica carinata HOM05D001285 ORTHO05D000199 5.9e-20 100.5 58 89.7
A06p14660 Brassica napus HOM05D001285 ORTHO05D000199 5.9e-20 100.5 78 69.2
BraA06t24592Z Brassica rapa HOM05D001285 ORTHO05D000199 1.3e-19 99.4 62 77.4
BcaC08g43423 Brassica carinata HOM05D001285 ORTHO05D000199 3.8e-19 97.8 62 75.8
BolC6t35851H Brassica oleracea HOM05D001285 ORTHO05D000199 1.1e-18 96.3 62 74.2
BcaC06g30937 Brassica carinata HOM05D001285 ORTHO05D000199 2.1e-17 92.0 61 72.1
BolC9t57594H Brassica oleracea HOM05D001285 ORTHO05D000199 4.7e-17 90.9 49 87.8
BcaB06g26565 Brassica carinata HOM05D001285 ORTHO05D000199 6.1e-17 90.5 61 70.5
BcaC07g41709 Brassica carinata HOM05D001285 ORTHO05D000199 1.8e-16 89.0 61 68.9
C01p48530 Brassica napus HOM05D001285 ORTHO05D000199 1.8e-16 89.0 61 68.9
BolC5t31727H Brassica oleracea HOM05D001285 ORTHO05D000199 1.8e-16 89.0 61 68.9
A02p24110 Brassica napus HOM05D001285 ORTHO05D000199 5.2e-16 87.4 61 67.2
C02p29930 Brassica napus HOM05D001285 ORTHO05D000199 5.2e-16 87.4 61 67.2
BraSC41t46221Z Brassica rapa HOM05D001285 ORTHO05D000199 5.2e-16 87.4 61 67.2
BcaB03g16401 Brassica carinata HOM05D001285 ORTHO05D000199 6.8e-16 87.0 62 74.2
BcaC08g43241 Brassica carinata HOM05D001285 ORTHO05D000199 6.8e-16 87.0 61 67.2
BcaC03g17060 Brassica carinata HOM05D001285 ORTHO05D000199 1.2e-15 86.3 61 65.6
C02p49780 Brassica napus HOM05D001285 ORTHO05D000199 1.2e-15 86.3 61 65.6
C06p20460 Brassica napus HOM05D001285 ORTHO05D000199 1.2e-15 86.3 61 68.9
BolC6t37227H Brassica oleracea HOM05D001285 ORTHO05D000199 1.2e-15 86.3 61 68.9
BolC7t42880H Brassica oleracea HOM05D001285 ORTHO05D000199 1.2e-15 86.3 61 67.2
BolC9t57745H Brassica oleracea HOM05D001285 ORTHO05D000199 1.2e-15 86.3 61 65.6
BolC3t18089H Brassica oleracea HOM05D001285 ORTHO05D000199 1.5e-15 85.9 61 65.6
BcaC05g29508 Brassica carinata HOM05D001285 ORTHO05D000199 2.6e-15 85.1 61 63.9
BcaC01g00776 Brassica carinata HOM05D001285 ORTHO05D000199 3.4e-15 84.7 61 65.6
BcaC08g43217 Brassica carinata HOM05D001285 ORTHO05D000199 3.4e-15 84.7 61 65.6
A06p36190 Brassica napus HOM05D001285 ORTHO05D000199 3.4e-15 84.7 61 65.6
C05p15150 Brassica napus HOM05D001285 ORTHO05D000199 3.4e-15 84.7 61 65.6
C09p07350 Brassica napus HOM05D001285 ORTHO05D000199 4.4e-15 84.3 61 67.2
BraA01t01846Z Brassica rapa HOM05D001285 ORTHO05D000199 4.4e-15 84.3 61 65.6
A07p07280 Brassica napus HOM05D000073 ORTHO05D000199 5.7e-15 84.0 61 65.6
A07p09780 Brassica napus HOM05D001285 ORTHO05D000199 5.7e-15 84.0 61 65.6
BraA03t11415Z Brassica rapa HOM05D001285 ORTHO05D000199 5.7e-15 84.0 61 65.6
BraA07t28518Z Brassica rapa HOM05D001285 ORTHO05D000199 5.7e-15 84.0 61 65.6
Thhalv10029261m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 7.5e-15 83.6 58 65.5
BcaC08g44187 Brassica carinata HOM05D001285 ORTHO05D000199 9.8e-15 83.2 61 63.9
BolC6t36784H Brassica oleracea HOM05D001285 ORTHO05D000199 9.8e-15 83.2 61 63.9
BraA02t08380Z Brassica rapa HOM05D001285 ORTHO05D000199 1.3e-14 82.8 61 63.9
BcaC08g45763 Brassica carinata HOM05D001285 ORTHO05D000199 2.2e-14 82.0 61 62.3
C06p35450 Brassica napus HOM05D001285 ORTHO05D000199 2.2e-14 82.0 61 62.3
C09p65960 Brassica napus HOM05D001285 ORTHO05D000199 2.2e-14 82.0 61 63.9
BcaC04g20925 Brassica carinata HOM05D001285 ORTHO05D000199 3.7e-14 81.3 61 62.3
C02p37580 Brassica napus HOM05D001285 ORTHO05D015508 3.7e-14 81.3 61 62.3
C03p03110 Brassica napus HOM05D001285 ORTHO05D000199 3.7e-14 81.3 61 62.3
C09p37840 Brassica napus HOM05D001285 ORTHO05D000199 3.7e-14 81.3 61 62.3
BraA01t02157Z Brassica rapa HOM05D001285 ORTHO05D000199 4.9e-14 80.9 61 62.3
BcaC06g34326 Brassica carinata HOM05D001285 ORTHO05D000199 6.3e-14 80.5 61 62.3
BolC6t38666H Brassica oleracea HOM05D001285 ORTHO05D000199 6.3e-14 80.5 61 60.7
BraA10t42948Z Brassica rapa HOM05D001285 ORTHO05D000199 8.3e-14 80.1 60 61.7
Thhalv10021997m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 8.3e-14 80.1 69 58.0
BcaB01g02953 Brassica carinata HOM05D001285 ORTHO05D000199 1.1e-13 79.7 61 68.9
AL4G20190 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.4e-13 79.3 58 62.1
AL6G40760 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.4e-13 79.3 58 62.1
BcaB02g11283 Brassica carinata HOM05D001285 ORTHO05D000199 2.4e-13 78.6 44 81.8
CARHR150320 Cardamine hirsuta HOM05D001285 ORTHO05D000199 3.2e-13 78.2 60 58.3
Carub.0005s0341 Capsella rubella HOM05D001285 ORTHO05D000199 5.4e-13 77.4 69 56.5
SpUn0003_0010 Schrenkiella parvula HOM05D001285 ORTHO05D017687 5.4e-13 77.4 61 59.0
AT5G45570 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 7.0e-13 77.0 59 59.3
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 1.6e-12 75.9 61 59.0
BcaC05g30530 Brassica carinata HOM05D001285 ORTHO05D000199 1.6e-12 75.9 61 59.0
BraA09t38468Z Brassica rapa HOM05D001285 ORTHO05D000199 1.6e-12 75.9 61 59.0
Carub.0006s2659 Capsella rubella HOM05D001285 ORTHO05D000199 1.6e-12 75.9 69 55.1
BcaNung03065 Brassica carinata HOM05D001285 ORTHO05D000199 2.0e-12 75.5 61 59.0
A03p39280 Brassica napus HOM05D001285 ORTHO05D000199 2.7e-12 75.1 61 57.4
AT5G28810 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 3.5e-12 74.7 59 57.6
Carub.0003s3058 Capsella rubella HOM05D001285 ORTHO05D000199 5.9e-12 73.9 58 56.9
Thhalv10015594m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 7.8e-12 73.6 45 75.6
AT3G31910 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 1.0e-11 73.2 58 56.9
AT4G08430 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 1.0e-11 73.2 59 55.9
AL3G40680 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.3e-11 72.8 55 61.8
Carub.0004s0714 Capsella rubella HOM05D001285 ORTHO05D000199 2.9e-11 71.6 58 56.9
CARHR107370 Cardamine hirsuta HOM05D001285 ORTHO05D000199 6.6e-11 70.5 59 50.8
AL6G41380 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 1.1e-10 69.7 63 49.2
C05p19180 Brassica napus HOM05D001285 ORTHO05D000199 1.1e-10 69.7 61 52.5
BolC5t30618H Brassica oleracea HOM05D001285 ORTHO05D000199 1.1e-10 69.7 61 52.5
Carub.0005s0915 Capsella rubella HOM05D001285 ORTHO05D000199 1.1e-10 69.7 69 50.7
Carub.0261s0001 Capsella rubella HOM05D001285 ORTHO05D000199 1.9e-10 68.9 58 55.2
Carub.0006s2619 Capsella rubella HOM05D001285 ORTHO05D000199 3.3e-10 68.2 57 56.1
Carub.0006s2635 Capsella rubella HOM05D001285 ORTHO05D000199 4.3e-10 67.8 58 55.2
C03p68150 Brassica napus HOM05D001285 ORTHO05D000199 7.3e-10 67.0 34 97.1
BraA05t20257Z Brassica rapa HOM05D001285 ORTHO05D015508 7.3e-10 67.0 48 66.7
AT2G10260 Arabidopsis thaliana HOM05D001285 ORTHO05D000199 9.5e-10 66.6 58 55.2
Carub.0004s0691 Capsella rubella HOM05D001285 ORTHO05D000199 9.5e-10 66.6 58 53.4
BcaB03g15497 Brassica carinata HOM05D001285 ORTHO05D000199 1.6e-09 65.9 62 62.9
Carub.0006s2660 Capsella rubella HOM05D001285 ORTHO05D000199 2.1e-09 65.5 69 50.7
Carub.0013s0001 Capsella rubella HOM05D001285 ORTHO05D000199 2.1e-09 65.5 58 53.4
C03p68140 Brassica napus HOM05D001285 ORTHO05D000199 2.8e-09 65.1 34 94.1
BolC3t19035H Brassica oleracea HOM05D001285 ORTHO05D000199 2.8e-09 65.1 34 94.1
AL1G51180 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 4.7e-09 64.3 57 50.9
AL6G43460 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 4.7e-09 64.3 57 50.9
AL8G21960 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 4.7e-09 64.3 57 50.9
BolC3t19036H Brassica oleracea HOM05D001285 ORTHO05D000199 4.7e-09 64.3 34 94.1
AL4G17640 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 6.2e-09 63.9 57 50.9
Carub.0007s3063 Capsella rubella HOM05D001285 ORTHO05D000199 6.2e-09 63.9 58 51.7
Carub.0007s3065 Capsella rubella HOM05D001285 ORTHO05D000199 6.2e-09 63.9 58 51.7
CARHR037550 Cardamine hirsuta HOM05D001285 ORTHO05D000199 6.2e-09 63.9 49 59.2
C05p58100 Brassica napus HOM05D001285 ORTHO05D000199 8.0e-09 63.5 41 73.2
Thhalv10005571m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 8.0e-09 63.5 60 45.0
Thhalv10009813m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 8.0e-09 63.5 60 45.0
Thhalv10015545m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 8.0e-09 63.5 60 45.0
A09p31300 Brassica napus HOM05D001285 ORTHO05D000199 1.4e-08 62.8 41 73.2
Thhalv10027292m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.4e-08 62.8 61 45.9
Carub.0008s0635 Capsella rubella HOM05D001285 ORTHO05D000199 3.1e-08 61.6 57 54.4
Thhalv10019746m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.1e-08 61.6 59 47.5
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 8.9e-08 60.1 59 49.2
Carub.0007s3691 Capsella rubella HOM05D001285 ORTHO05D000199 1.5e-07 59.3 60 43.3
Thhalv10003101m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.5e-07 59.3 61 44.3
Thhalv10019761m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.0e-07 58.9 61 44.3
Thhalv10003035m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.6e-07 58.5 58 44.8
Thhalv10003373m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.6e-07 58.5 59 44.1
Thhalv10003114m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.4e-07 58.2 61 44.3
Thhalv10015990m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.4e-07 58.2 61 44.3
Thhalv10023880m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.4e-07 58.2 61 44.3
Thhalv10029511m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.4e-07 58.2 61 44.3
BraA02t07713Z Brassica rapa HOM05D001285 ORTHO05D000199 4.4e-07 57.8 40 70.0
Thhalv10027106m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 7.5e-07 57.0 53 47.2
Thhalv10011096m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 9.8e-07 56.6 61 44.3
Thhalv10015902m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.7e-06 55.8 61 42.6
Thhalv10023966m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.7e-06 55.8 61 45.9
CARHR273180 Cardamine hirsuta HOM05D001285 ORTHO05D000199 2.9e-06 55.1 50 50.0
BolC2t07251H Brassica oleracea HOM05D001285 ORTHO05D000199 4.9e-06 54.3 38 68.4
Thhalv10002266m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.9e-06 54.3 61 42.6


User provided reference genes

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