Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p67910 Brassica napus HOM05D001239 ORTHO05D017499 1.1e-173 613.2 317 100.0
BcaC01g02173 Brassica carinata HOM05D001239 ORTHO05D017499 2.7e-148 528.9 281 99.3
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 1.0e-65 254.6 395 43.3
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-64 249.2 348 45.7
BolC7t40747H Brassica oleracea HOM05D001239 ORTHO05D027739 1.6e-60 237.3 259 55.6
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 1.4e-59 234.2 341 44.6
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 4.1e-59 232.6 352 44.3
C07p03520 Brassica napus HOM05D001239 ORTHO05D027739 8.5e-57 224.9 317 46.4
BcaB01g02634 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-52 211.1 342 39.8
BcaB07g32141 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-52 210.7 344 41.3
BraA06t25448Z Brassica rapa HOM05D001239 ORTHO05D017499 1.4e-51 207.6 135 85.2
C02p30330 Brassica napus HOM05D001239 ORTHO05D027739 3.8e-49 199.5 211 51.7
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-48 196.1 326 42.3
C06p18600 Brassica napus HOM05D001239 ORTHO05D017499 1.0e-38 164.9 262 42.4
BcaC04g22862 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-38 164.1 328 39.0
BolC3t19015H Brassica oleracea HOM05D001239 ORTHO05D017499 1.8e-38 164.1 93 100.0
BcaC08g44422 Brassica carinata HOM05D001239 ORTHO05D017499 1.7e-36 157.5 176 52.8
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 5.3e-35 152.5 353 36.3
BolC6t37073H Brassica oleracea HOM05D001239 ORTHO05D017499 2.9e-33 146.7 242 40.5
BolC2t08478H Brassica oleracea HOM05D001239 ORTHO05D024427 3.8e-33 146.4 248 39.9
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 5.5e-32 142.5 271 38.0
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 1.5e-29 134.4 265 36.6
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 4.4e-29 132.9 322 34.8
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-28 130.2 306 35.3
BolC8t49935H Brassica oleracea HOM05D001239 ORTHO05D011709 2.4e-27 127.1 202 44.6
C08p07070 Brassica napus HOM05D001239 ORTHO05D024427 4.1e-27 126.3 189 43.4
BcaC07g40131 Brassica carinata HOM05D014076 ORTHO05D000006 8.6e-25 118.6 327 34.6
BcaC05g25304 Brassica carinata HOM05D000508 ORTHO05D000371 1.1e-24 118.2 159 49.7
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 1.2e-23 114.8 335 34.6
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 1.2e-23 114.8 132 51.5
BcaB08g34271 Brassica carinata HOM05D001239 ORTHO05D017499 3.6e-23 113.2 141 47.5
BraA09t38239Z Brassica rapa HOM05D014076 ORTHO05D021903 6.1e-23 112.5 265 36.2
BcaC08g45061 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-21 106.3 252 36.5
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-20 104.8 321 29.6
BcaC01g00485 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-20 102.4 318 31.4
BcaC09g50348 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-19 99.0 101 52.5
BolC8t47551H Brassica oleracea HOM05D001239 ORTHO05D024427 9.2e-19 98.6 138 46.4
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-18 97.8 309 30.1
C06p11850 Brassica napus HOM05D009238 ORTHO05D012489 3.5e-18 96.7 252 31.0
BraA02t08674Z Brassica rapa HOM05D009238 ORTHO05D012489 4.5e-18 96.3 291 30.2
BolC1t05632H Brassica oleracea HOM05D014076 ORTHO05D021903 2.9e-17 93.6 255 35.3
BolC5t29932H Brassica oleracea HOM05D001239 ORTHO05D033080 3.8e-17 93.2 120 50.8
BcaC01g03871 Brassica carinata HOM05D001239 ORTHO05D011709 5.0e-17 92.8 224 39.3
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 5.0e-17 92.8 174 36.2
BcaB08g36396 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-17 92.4 240 32.5
BraA01t01837Z Brassica rapa HOM05D014076 ORTHO05D021903 1.1e-16 91.7 260 33.1
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 7.3e-16 89.0 269 31.2
BolC3t19016H Brassica oleracea HOM05D001239 ORTHO05D106951 1.6e-15 87.8 101 54.5
BcaB08g34270 Brassica carinata HOM05D001239 ORTHO05D000411 2.8e-15 87.0 75 57.3
C03p49130 Brassica napus HOM05D014076 ORTHO05D024532 4.7e-15 86.3 244 33.6
BcaC02g12033 Brassica carinata HOM05D001239 ORTHO05D011709 6.1e-15 85.9 182 37.9
C09p49690 Brassica napus HOM05D001239 ORTHO05D011709 1.0e-14 85.1 208 36.1
BcaC02g11658 Brassica carinata HOM05D014076 ORTHO05D021903 1.4e-14 84.7 304 31.6
BcaB07g33722 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-14 84.3 199 36.7
BcaC05g27311 Brassica carinata HOM05D001239 ORTHO05D011709 1.8e-14 84.3 190 36.8
BcaC06g33741 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-14 83.6 281 30.2
BcaB01g02479 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-14 83.2 281 29.9
A01p18960 Brassica napus HOM05D014076 ORTHO05D021903 1.2e-13 81.6 247 32.4
BcaB04g17452 Brassica carinata HOM05D009238 ORTHO05D019868 3.4e-13 80.1 274 29.9
C03p49160 Brassica napus HOM05D014076 ORTHO05D024532 5.7e-13 79.3 198 37.4
BcaB07g33550 Brassica carinata HOM05D001239 ORTHO05D011709 7.5e-13 79.0 141 40.4
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 3.7e-12 76.6 288 27.8
BcaC05g29417 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-12 76.6 173 32.4
BcaC07g42701 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-11 74.7 107 39.3
BcaC05g25783 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-11 73.9 142 33.8
BcaB04g17991 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-11 73.6 108 36.1
C04p30980 Brassica napus HOM05D001035 ORTHO05D021752 3.2e-11 73.6 125 40.0
BraA03t12194Z Brassica rapa HOM05D009238 ORTHO05D012489 4.1e-11 73.2 187 34.8
BcaC01g05559 Brassica carinata HOM05D001239 ORTHO05D011709 7.0e-11 72.4 237 30.8
BcaB03g11924 Brassica carinata HOM05D001239 ORTHO05D011709 9.2e-11 72.0 93 46.2
A06p35270 Brassica napus HOM05D000591 ORTHO05D000579 9.2e-11 72.0 98 48.0
BcaC01g01083 Brassica carinata HOM05D001239 ORTHO05D015497 2.0e-10 70.9 75 48.0
C01p34040 Brassica napus HOM05D001239 ORTHO05D011709 2.7e-10 70.5 144 36.8
C06p19100 Brassica napus HOM05D007244 ORTHO05D011635 2.7e-10 70.5 276 29.0
A05p24750 Brassica napus HOM05D002138 ORTHO05D002106 3.5e-10 70.1 91 46.2
BcaC03g17089 Brassica carinata HOM05D025306 ORTHO05D011709 5.9e-10 69.3 151 36.4
C01p30110 Brassica napus HOM05D001239 ORTHO05D023908 1.3e-09 68.2 220 34.1
C04p33720 Brassica napus HOM05D031458 ORTHO05D027524 1.7e-09 67.8 129 38.0
BolC4t24940H Brassica oleracea HOM05D031458 ORTHO05D027524 1.7e-09 67.8 129 38.0
BcaB04g18104 Brassica carinata HOM05D001239 ORTHO05D015497 3.0e-09 67.0 117 39.3
A08p17800 Brassica napus HOM05D007244 ORTHO05D028076 3.0e-09 67.0 322 29.2
A10p16820 Brassica napus HOM05D016815 ORTHO05D012489 3.0e-09 67.0 236 29.2
BcaC08g45870 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-09 66.6 115 35.7
BcaC05g27714 Brassica carinata HOM05D001239 ORTHO05D000411 6.6e-09 65.9 56 58.9
BolC3t17197H Brassica oleracea HOM05D014076 ORTHO05D024532 1.1e-08 65.1 105 44.8
BcaC03g16856 Brassica carinata HOM05D009238 ORTHO05D019868 1.9e-08 64.3 188 34.0
BcaC06g33595 Brassica carinata HOM05D000003 ORTHO05D000006 1.9e-08 64.3 143 35.7
BcaB05g23185 Brassica carinata HOM05D001239 ORTHO05D023908 2.5e-08 63.9 81 44.4
BraA08t33378Z Brassica rapa HOM05D007244 ORTHO05D011709 2.5e-08 63.9 304 26.6
BcaC09g51060 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-07 61.6 125 32.0
C03p76090 Brassica napus HOM05D007244 ORTHO05D027899 1.2e-07 61.6 284 26.1
BraA09t38523Z Brassica rapa HOM05D027742 ORTHO05D027054 1.2e-07 61.6 184 31.0
C04p63540 Brassica napus HOM05D007244 ORTHO05D040510 1.6e-07 61.2 357 26.1
BraA08t34457Z Brassica rapa HOM05D007244 ORTHO05D040510 1.6e-07 61.2 357 26.1
BcaB04g18066 Brassica carinata HOM05D001239 ORTHO05D023908 4.7e-07 59.7 112 40.2
BcaC02g11343 Brassica carinata HOM05D007244 ORTHO05D021589 4.7e-07 59.7 336 25.9
A03p63670 Brassica napus HOM05D001239 ORTHO05D011709 4.7e-07 59.7 59 49.2
C06p15150 Brassica napus HOM05D016815 ORTHO05D020093 4.7e-07 59.7 222 27.0
C08p14340 Brassica napus HOM05D001239 ORTHO05D024532 4.7e-07 59.7 117 40.2
BolC6t36689H Brassica oleracea HOM05D016815 ORTHO05D020093 4.7e-07 59.7 222 27.0
BraA02t05281Z Brassica rapa HOM05D007244 ORTHO05D027899 4.7e-07 59.7 280 24.6
BraA03t15438Z Brassica rapa HOM05D001239 ORTHO05D011709 4.7e-07 59.7 59 49.2
BcaC03g17081 Brassica carinata HOM05D001239 ORTHO05D000411 8.0e-07 58.9 39 59.0
C02p57570 Brassica napus HOM05D001239 ORTHO05D011709 1.4e-06 58.2 110 38.2
BraA03t13842Z Brassica rapa HOM05D009238 ORTHO05D020093 1.4e-06 58.2 56 53.6
CARHR154060 Cardamine hirsuta HOM05D001239 ORTHO05D011709 2.3e-06 57.4 97 43.3
A10p08920 Brassica napus HOM05D001239 ORTHO05D011709 3.1e-06 57.0 76 46.1
C07p05770 Brassica napus HOM05D001239 ORTHO05D011709 3.1e-06 57.0 50 58.0
C09p64410 Brassica napus HOM05D007244 ORTHO05D000411 3.1e-06 57.0 324 25.0
BolC7t42027H Brassica oleracea HOM05D001239 ORTHO05D000925 3.1e-06 57.0 139 33.8
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 5.2e-06 56.2 295 27.8
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 5.2e-06 56.2 295 27.8
BcaC07g39368 Brassica carinata HOM05D009238 ORTHO05D012489 6.8e-06 55.8 225 29.8
C03p87880 Brassica napus HOM05D001239 ORTHO05D033080 6.8e-06 55.8 49 63.3
C07p04310 Brassica napus HOM05D001239 ORTHO05D011709 6.8e-06 55.8 132 35.6
BolC6t35474H Brassica oleracea HOM05D016295 ORTHO05D017554 6.8e-06 55.8 264 27.3
BraA09t35781Z Brassica rapa HOM05D007244 ORTHO05D033844 6.8e-06 55.8 273 28.6


User provided reference genes

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