Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p65840 Brassica napus HOM05D006237 ORTHO05D002967 2.0e-124 449.1 224 100.0
BolC3t18842H Brassica oleracea HOM05D006237 ORTHO05D002967 4.3e-124 448.0 224 99.6
BraA06t25746Z Brassica rapa HOM05D006237 ORTHO05D027135 1.4e-53 213.8 125 88.8
A06p18660 Brassica napus HOM05D006237 ORTHO05D002967 2.5e-39 166.4 256 46.9
BcaB01g00750 Brassica carinata HOM05D006237 ORTHO05D002967 2.1e-38 163.3 249 46.6
BcaC07g39385 Brassica carinata HOM05D006237 ORTHO05D002967 1.2e-36 157.5 249 45.4
C08p24080 Brassica napus HOM05D006237 ORTHO05D002967 1.2e-36 157.5 249 45.4
BolC8t50029H Brassica oleracea HOM05D006237 ORTHO05D002967 1.2e-36 157.5 249 45.4
BraA06t24944Z Brassica rapa HOM05D006237 ORTHO05D002967 1.2e-33 147.5 274 41.6
Aa31LG4G17550 Aethionema arabicum HOM05D006237 ORTHO05D002967 6.0e-33 145.2 255 41.6
Sp5g12990 Schrenkiella parvula HOM05D006237 ORTHO05D002967 1.9e-31 140.2 234 44.4
Thhalv10010396m.g Eutrema salsugineum HOM05D006237 ORTHO05D002967 5.6e-31 138.7 237 44.7
AT3G49080 Arabidopsis thaliana HOM05D006237 ORTHO05D002967 8.1e-30 134.8 232 43.5
AL5G28600 Arabidopsis lyrata HOM05D006237 ORTHO05D002967 2.4e-29 133.3 232 43.1
A06p28040 Brassica napus HOM05D006237 ORTHO05D027135 1.2e-28 131.0 126 60.3
Glyma.11G094400 Glycine max HOM05D006237 ORTHO05D002967 1.3e-27 127.5 254 37.0
Carub.0005s1528 Capsella rubella HOM05D006237 ORTHO05D002967 1.7e-27 127.1 197 46.2
Ca_08896_v3 Cicer arietinum L. HOM05D006237 ORTHO05D002967 1.7e-27 127.1 257 38.1
Phvul.011G076300 Phaseolus vulgaris HOM05D006237 ORTHO05D002967 2.9e-27 126.3 255 37.6
CARHR157920 Cardamine hirsuta HOM05D006237 ORTHO05D002967 3.8e-27 125.9 229 41.9
TPR.G21017 Trifolium pratense HOM05D006237 ORTHO05D002967 1.4e-26 124.0 257 37.4
Migut.F00315 Erythranthe guttata HOM05D006237 ORTHO05D002967 2.5e-26 123.2 260 36.2
Glyma.12G020800 Glycine max HOM05D006237 ORTHO05D002967 5.5e-26 122.1 255 37.3
THA.LOC104821384 Tarenaya hassleriana HOM05D006237 ORTHO05D002967 5.5e-26 122.1 250 37.6
CiPaw.15G152100 Carya illinoinensis HOM05D006237 ORTHO05D002967 9.3e-26 121.3 266 36.8
Lalb_Chr01g0001091 Lupinus albus HOM05D006237 ORTHO05D002967 2.7e-25 119.8 256 37.5
Cfa016275 Carpinus fangiana HOM05D006237 ORTHO05D002967 7.9e-25 118.2 266 34.2
Psat6g075200 Pisum sativum HOM05D006237 ORTHO05D002967 2.3e-24 116.7 265 34.7
Actinidia34142 Actinidia chinensis HOM05D006237 ORTHO05D002967 3.9e-24 115.9 254 34.3
Lj3g0001662 Lotus japonicus HOM05D006237 ORTHO05D002967 3.9e-24 115.9 256 34.8
Medtr3g078370 Medicago truncatula HOM05D006237 ORTHO05D002967 3.9e-24 115.9 258 35.3
Prupe.3G056900 Prunus persica HOM05D006237 ORTHO05D002967 3.9e-24 115.9 263 34.6
arahy.Tifrunner.gnm1.ann1.C9TN30 Arachis hypogaea HOM05D006237 ORTHO05D002967 5.1e-24 115.5 264 35.6
FAN14G2466 Fragaria x ananassa HOM05D006237 ORTHO05D002967 5.1e-24 115.5 259 37.1
Atru.chr1.396 Acer truncatum HOM05D006237 ORTHO05D002967 6.7e-24 115.2 264 37.5
Phvul.011G049550 Phaseolus vulgaris HOM05D006237 ORTHO05D002967 6.7e-24 115.2 197 40.1
FAN09G4095 Fragaria x ananassa HOM05D006237 ORTHO05D002967 8.7e-24 114.8 196 41.3
Sabra12G0108700 Salix brachista HOM05D006237 ORTHO05D002967 8.7e-24 114.8 259 35.9
CANSAT54G1461 Cannabis sativa HOM05D006237 ORTHO05D002967 1.1e-23 114.4 257 36.2
Eucgr.K00287 Eucalyptus grandis HOM05D006237 ORTHO05D002967 1.1e-23 114.4 262 34.4
FAN05G1350 Fragaria x ananassa HOM05D006237 ORTHO05D002967 1.1e-23 114.4 259 37.5
FAN05G1909 Fragaria x ananassa HOM05D006237 ORTHO05D002967 1.1e-23 114.4 259 37.5
TWI12G0168 Tripterygium wilfordii HOM05D006237 ORTHO05D002967 1.1e-23 114.4 259 35.1
FvH4_6g32580 Fragaria vesca HOM05D006237 ORTHO05D002967 1.5e-23 114.0 259 37.8
Lalb_Chr19g0139751 Lupinus albus HOM05D006237 ORTHO05D002967 1.9e-23 113.6 259 35.5
SGA_v2.0_scaffold44G16742 Striga asiatica HOM05D006237 ORTHO05D002967 1.9e-23 113.6 196 39.8
Cpa.g.sc1.394 Carica papaya HOM05D006237 ORTHO05D002967 2.5e-23 113.2 258 36.4
Potri.012G144700 Populus trichocarpa HOM05D006237 ORTHO05D002967 2.5e-23 113.2 260 34.6
CSS0013329 Camellia sinensis var. sinensis HOM05D006237 ORTHO05D002967 3.3e-23 112.8 258 36.0
arahy.Tifrunner.gnm1.ann1.B3F3VS Arachis hypogaea HOM05D006237 ORTHO05D002967 4.3e-23 112.5 264 34.8
MD15G1412900 Malus domestica HOM05D006237 ORTHO05D002967 4.3e-23 112.5 196 40.3
PGSC0003DMG400023687 Solanum tuberosum HOM05D006237 ORTHO05D002967 4.3e-23 112.5 257 33.5
TWI56G0599 Tripterygium wilfordii HOM05D006237 ORTHO05D002967 4.3e-23 112.5 267 33.7
MBI16_g19591_MAGBIO Magnolia biondii HOM05D006237 ORTHO05D002967 5.7e-23 112.1 254 36.2
Gohir.A09G129100 Gossypium hirsutum HOM05D006237 ORTHO05D002967 7.4e-23 111.7 262 35.1
MD09G1200300 Malus domestica HOM05D006237 ORTHO05D002967 9.6e-23 111.3 196 40.3
Manes.14G023800 Manihot esculenta HOM05D006237 ORTHO05D002967 1.3e-22 110.9 257 36.2
RcHm_v2.0_Chr2g0141031 Rosa chinensis HOM05D006237 ORTHO05D002967 1.3e-22 110.9 257 35.0
FAN02G0617 Fragaria x ananassa HOM05D006237 ORTHO05D002967 1.6e-22 110.5 259 36.7
Solyc10g080160.2 Solanum lycopersicum HOM05D006237 ORTHO05D002967 2.1e-22 110.2 261 33.0
Sopen10g030770 Solanum pennellii HOM05D006237 ORTHO05D002967 2.1e-22 110.2 261 33.0
DCAR_027497 Daucus carota HOM05D006237 ORTHO05D002967 2.8e-22 109.8 196 40.3
PGR142G0430 Punica granatum HOM05D006237 ORTHO05D002967 2.8e-22 109.8 264 34.1
VMungo1127G1244 Vigna mungo HOM05D001780 ORTHO05D004373 2.8e-22 109.8 187 40.6
Thecc.05G176100 Theobroma cacao HOM05D006237 ORTHO05D002967 3.7e-22 109.4 264 34.5
MSTRG.27097 Avicennia marina HOM05D006237 ORTHO05D002967 4.8e-22 109.0 263 35.0
ClCG01G001020 Citrullus lanatus HOM05D006237 ORTHO05D002967 4.8e-22 109.0 254 34.3
unitig_0.g1076 Utricularia gibba HOM05D006237 ORTHO05D002967 4.8e-22 109.0 284 33.5
GSVIVG01036122001 Vitis vinifera HOM05D006237 ORTHO05D002967 8.2e-22 108.2 258 34.1
vmacro12929 Vaccinium macrocarpon HOM05D006237 ORTHO05D002967 1.1e-21 107.8 196 40.3
Cc02_g29180 Coffea canephora HOM05D006237 ORTHO05D002967 1.8e-21 107.1 196 39.3
Duzib128G1632 Durio zibethinus HOM05D006237 ORTHO05D002967 2.4e-21 106.7 264 33.3
AUR62027921 Chenopodium quinoa HOM05D006237 ORTHO05D002967 3.1e-21 106.3 262 34.0
Haze_00028 Corylus avellana HOM05D006237 ORTHO05D002967 3.1e-21 106.3 198 36.4
Nn1g09125 Nelumbo nucifera HOM05D006237 ORTHO05D002967 3.1e-21 106.3 254 34.3
QL09p013331 Quercus lobata HOM05D006237 ORTHO05D002967 3.1e-21 106.3 206 36.9
Oeu022599.1 Olea europaea HOM05D006237 ORTHO05D002967 4.1e-21 105.9 166 43.4
Sc20g0002110 Simmondsia chinensis HOM05D006237 ORTHO05D002967 4.1e-21 105.9 194 38.7
TAR636G1281 Trochodendron aralioides HOM05D002456 ORTHO05D002967 4.1e-21 105.9 187 39.0
Ah.16g108280 Amaranthus hybridus HOM05D006237 ORTHO05D002967 5.3e-21 105.5 266 34.2
Gohir.D09G125100 Gossypium hirsutum HOM05D006237 ORTHO05D002967 5.3e-21 105.5 186 42.5
MELO3C005830.2 Cucumis melo HOM05D006237 ORTHO05D002967 6.9e-21 105.1 227 34.8
AUR62020779 Chenopodium quinoa HOM05D006237 ORTHO05D002967 9.0e-21 104.8 202 38.6
TAR629G2491 Trochodendron aralioides HOM05D006237 ORTHO05D002967 2.0e-20 103.6 196 39.3
HanXRQChr02g0055961 Helianthus annuus HOM05D006237 ORTHO05D002967 2.6e-20 103.2 196 38.3
Nitab4.5_0005550g0040 Nicotiana tabacum HOM05D006237 ORTHO05D002967 3.4e-20 102.8 196 37.8
Aqoxy7G01479 Aquilegia oxysepala HOM05D006237 ORTHO05D002967 5.9e-20 102.1 196 39.3
CDE06G2505 Ceratophyllum demersum HOM05D003460 ORTHO05D004277 5.9e-20 102.1 261 33.7
CsaV3_5G001160 Cucumis sativus L. HOM05D006237 ORTHO05D002967 5.9e-20 102.1 261 32.6
Lsat_1_v5_gn_4_66521 Lactuca sativa HOM05D006237 ORTHO05D002967 5.9e-20 102.1 268 31.3
Rhsim03G0189600 Rhododendron simsii HOM05D006237 ORTHO05D002967 5.9e-20 102.1 196 38.3
Peaxi162Scf00078g00351 Petunia axillaris HOM05D006237 ORTHO05D002967 7.6e-20 101.7 196 37.2
Sed0010472 Sechium edule HOM05D006237 ORTHO05D002967 1.3e-19 100.9 196 37.8
Gorai.006G144100 Gossypium raimondii HOM05D006237 ORTHO05D002967 2.9e-19 99.8 195 37.4
ECA248G0219 Erigeron canadensis HOM05D006237 ORTHO05D002967 3.8e-19 99.4 265 31.7
SalBow4G0349 Salvia bowleyana HOM05D006237 ORTHO05D002967 3.8e-19 99.4 128 48.4
BcaC01g02385 Brassica carinata HOM05D006237 ORTHO05D027135 8.5e-19 98.2 51 98.0
PSO173G0153 Papaver somniferum HOM05D006237 ORTHO05D002967 1.9e-18 97.1 264 34.1
Ciclev10005229m.g Citrus clementina HOM05D006237 ORTHO05D002967 3.2e-18 96.3 129 45.7
Oeu048745.1 Olea europaea HOM05D006237 ORTHO05D002967 3.2e-18 96.3 129 48.1
ATR0680G220 Amborella trichopoda HOM05D006237 ORTHO05D002967 4.2e-18 95.9 196 37.8
PSO566G0038 Papaver somniferum HOM05D006237 ORTHO05D002967 9.3e-18 94.7 267 34.1
Rhsim09G0091100 Rhododendron simsii HOM05D006237 ORTHO05D002967 1.6e-17 94.0 96 54.2
HPP92_005582 Vanilla planifolia HOM05D006237 ORTHO05D002967 2.7e-17 93.2 264 31.8
Nitab4.5_0006974g0010 Nicotiana tabacum HOM05D006237 ORTHO05D002967 4.6e-17 92.4 196 33.7
CAN.G65.182 Capsicum annuum HOM05D006237 ORTHO05D002967 1.0e-16 91.3 138 40.6
Os07g0658200 Oryza sativa ssp. japonica HOM05D006237 ORTHO05D002967 3.3e-15 86.3 196 35.7
HPP92_005592 Vanilla planifolia HOM05D006237 ORTHO05D002967 1.6e-14 84.0 259 30.5
SHI13756 Sapria himalayana HOM05D006237 ORTHO05D002967 2.2e-14 83.6 188 33.5
Zm00001eb329680 Zea mays HOM05D006237 ORTHO05D002967 8.2e-14 81.6 196 35.7
Lj4A176T35 Lonicera japonica HOM05D006237 ORTHO05D002967 1.1e-13 81.3 181 35.4
BcaC01g02386 Brassica carinata HOM05D006237 ORTHO05D027135 1.4e-13 80.9 38 100.0
SEGI_03568 Sequoiadendron giganteum HOM05D006237 ORTHO05D002967 8.5e-11 71.6 196 32.1
Mapoly0187s0001 Marchantia polymorpha HOM05D006237 ORTHO05D002967 1.4e-10 70.9 195 31.3
Pp3c4_6350 Physcomitrium patens HOM05D006237 ORTHO05D002967 3.2e-10 69.7 195 30.8
ATR1145G006 Amborella trichopoda HOM05D006237 ORTHO05D002967 1.8e-08 63.9 80 47.5


User provided reference genes

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